Medical Imaging Interaction Toolkit  2024.06.99-b6700b79
Medical Imaging Interaction Toolkit

Find image slices visible on a given plane. More...

Namespaces

 BaseRendererHelper
 
 BooleanOperation
 Executes a boolean operation on two different segmentations. All parameters of the boolean operations must be specified during construction. The actual operation is executed when calling GetResult().
 
 cl
 
 ColorConversions
 some conversion routines to convert between different color spaces
 
 convolution
 
 DICOMIOHelper
 
 DisplayActionEventFunctions
 
 Forms
 
 ImageMappingHelper
 
 InterpolateImageFunction
 
 LabelSetImageHelper
 
 MemoryUtilities
 
 MitkMultilabelIOMimeTypes
 
 MitkROIIOMimeTypes
 
 modelFit
 
 MultiLabelSegmentation
 
 PlaneClipping
 
 PointSetMappingHelper
 
 PropertyPersistenceDeserialization
 
 PropertyPersistenceSerialization
 
 RenderWindowLayerUtilities
 
 ROIMapperHelper
 
 SegmentationHelper
 
 SliceNavigationHelper
 
 Utf8Util
 

Classes

class  AbstractAnnotationRenderer
 Baseclass of Annotation layouters An AbstractAnnotationRenderer can be implemented to control a set of Annotation by means of position and size. More...
 
class  AbstractClassifier
 
class  AbstractFileIO
 Abstract class for implementing a reader and writer. More...
 
class  AbstractFileIOReader
 
struct  AbstractFileIOWriter
 
class  AbstractFileReader
 Base class for creating mitk::BaseData objects from files or streams. More...
 
class  AbstractFileWriter
 Base class for writing mitk::BaseData objects to files or streams. More...
 
class  AbstractGlobalImageFeature
 
class  AbstractTransformGeometry
 Describes a geometry defined by an vtkAbstractTransform and a plane. More...
 
class  AccessByItkException
 Exception class thrown in AccessByItk macros. More...
 
struct  AccessItkImageFunctor
 
class  Action
 represents an action, that is executed after a certain event (in statemachine-mechanism) More...
 
class  AddContourTool
 Fill the inside of a contour with 1. More...
 
class  AffineBaseDataInteractor3D
 Affine interaction with mitk::BaseGeometry. More...
 
class  AffineImageCropperInteractor
 Affine interaction with objects in 3D windows. More...
 
class  AIFBasedModelBase
 Base Class for all physiological perfusion models using an Aterial Input Function All AIF based models come with an array of AIF values and the corresponding TimeGrid ( AIF(t)) This class provides functions for setting the AIF Values and optionally a specific AIF TimeGrid. It also provides a method for interpolation of the AIF source array to a specified Timegrid that differs from AIFTimeGrid. The AIF must be set with an itk::Array. If no AIFTimeGrid is specified with the Setter, it is assumed that the AIFTimeGrid is the same as the ModelTimegrid (e.g. AIF is derived from data set to be fitted). In this case, AIFvalues must have the same length as ModelTimeGrid, otherwise an exception is generated. More...
 
class  AIFBasedModelParameterizerBase
 
class  AnatomicalStructureColorPresets
 
class  AnisotropicIterativeClosestPointRegistration
 Implementation of the anisotropic iterative closest point (A-ICP) algorithm. More...
 
class  AnisotropicRegistrationCommon
 A Class that provides common static functions used by all classes and tests in the anisotropic iterative closest point algorithm (AnisotropicIterativeClosestPointRegistration). More...
 
class  Annotation
 Base class for all Annotation This class is to be implemented in order to create Annotation which are managed by a AbstractAnnotationRenderer. This class contains an internal Propertylist for configuring the appearance of the implemented Overlay. More...
 
class  AnnotationProperty
 Property for annotations. More...
 
class  AnnotationUtils
 The AnnotationUtils class provides static functions for accsessing registered AnnotationRenderers and Annotations. More...
 
class  AnyGroupEvent
 
class  AnyLabelEvent
 
class  ApplicationCursor
 Allows to override the application's cursor. More...
 
class  ApplicationCursorImplementation
 Toolkit specific implementation of mitk::ApplicationCursor. More...
 
class  ApplyDiffImageOperation
 Operation, that holds information about some image difference. More...
 
class  ApplyTransformMatrixOperation
 
class  ArbitraryTimeGeometry
 
class  AreaUnderFirstMomentDescriptionParameter
 
class  AreaUnderTheCurveDescriptionParameter
 
class  ArithmeticOperation
 Executes a arithmetic operations on one or two images. More...
 
struct  AssertImageTypeIsValid
 A helper template for compile-time checking of supported ITK image types. More...
 
class  AterialInputFunctionGenerator
 Compute the Aterial Input Function from a given dynamic image and a mask defining the tumour supplying artery. More...
 
class  AutoCropImageFilter
 Shrink the image borders to a minimum considering a background color. More...
 
class  AutoCropTool
 Crops selected segmentations. More...
 
class  AutoSelectingDICOMReaderService
 
class  BaseApplication
 
class  BaseController
 Baseclass for renderer slice-/camera-/time-control. More...
 
class  BaseData
 Base of all data objects. More...
 
class  BaseDataIO
 BaseDataIO creates instances of BaseData objects using an object factory. More...
 
class  BaseDataSerializer
 Base class for objects that serialize BaseData types. More...
 
class  BaseDataSource
 Superclass of all classes generating some kind of mitk::BaseData. More...
 
class  BaseDataTestImplementation
 Implementation of BaseData (for testing) More...
 
class  BaseDICOMReaderService
 
class  BaseGeometry
 BaseGeometry Describes the geometry of a data object. More...
 
class  BaseLocalStorageHandler
 Interface for accessing (templated) LocalStorageHandler instances. More...
 
class  BaseProperty
 Abstract base class for properties. More...
 
class  BasePropertySerializer
 Base class for objects that serialize BaseProperty types. More...
 
class  BaseRenderer
 
class  BilateralFilter
 
class  BinaryImageToLabelSetImageFilter
 Converts an binary image to a LabelSetImage. The amount of labels equals the connected components. More...
 
class  BinaryThresholdBaseTool
 Base class for binary threshold tools. More...
 
class  BinaryThresholdTool
 Calculates the segmented volumes for binary images. More...
 
class  BinaryThresholdULTool
 Calculates the segmented volumes for binary images. More...
 
class  BindDispatcherInteractor
 This Class is used to connect a DataStorage with the Dispatcher. More...
 
class  BoolLookupTable
 specializations of GenericLookupTable More...
 
class  BoolLookupTableProperty
 
class  BoolProperty
 
class  BoundingObject
 superclass of all bounding objects (cylinder, cuboid,...) More...
 
class  BoundingObjectCutAndCast
 Cuts an Boundingobject out of an mitk Image. More...
 
class  BoundingObjectCutter
 Cuts an Boundingobject out of an mitk Image. More...
 
class  BoundingObjectGroup
 group object, that contains several mitk::BoundingObjects More...
 
class  BoundingObjectToSegmentationFilter
 
class  BoundingShapeCropper
 Crops or masks an Boundingbox defined by GeometryData out of an mitk Image. More...
 
class  BoundingShapeInteractor
 Basic interaction methods for mitk::GeometryData. More...
 
class  BoundingShapeObjectFactory
 
class  BoundingShapeVtkMapper2D
 
class  BoundingShapeVtkMapper3D
 
class  CalculateSegmentationVolume
 
class  CallbackEventOneParameter
 Used by CallbackFromGUIThread to pass parameters. More...
 
class  CallbackFromGUIThread
 Allows threads to call some method from within the GUI thread. More...
 
class  CallbackFromGUIThreadImplementation
 Toolkit specific implementation of mitk::CallbackFromGUIThread. More...
 
class  CameraController
 controls the camera used by the associated BaseRenderer More...
 
class  CameraRotationController
 
class  Caster
 
class  CellOperation
 Operation, that holds everything necessary for an operation on a cell. More...
 
class  CESTDICOMManualReaderService
 
class  CESTDICOMReaderService
 
class  CESTImageNormalizationFilter
 Normalization filter for CEST images. More...
 
class  CESTIOActivator
 
class  ChannelDescriptor
 An object which holds all essential information about a single channel of an Image. More...
 
class  ChartExampleTestHelper
 
class  ChiSquareFitCostFunction
 
class  ClassicDICOMSeriesReader
 Sorting and grouping like mitk::DicomSeriesReader until 2013. More...
 
class  ClassicDICOMSeriesReaderService
 
class  ClippedSurfaceBoundsCalculator
 
class  ClippingPlaneInteractor3D
 Specialized interactor for clipping planes. More...
 
class  ClippingProperty
 Property for clipping datasets; currently only clipping planes are possible. More...
 
class  CloseRegionTool
 Closes/Fills the inside of a contour with the foreground pixel value. More...
 
class  CLUtil
 
class  ColorBarAnnotation
 Displays configurable scales on the renderwindow. The scale is determined by the image spacing. More...
 
class  ColorProperty
 The ColorProperty class RGB color property. More...
 
class  ColorSequence
 Interface for creating a sequence of nice/matching/appropriate/... colors. More...
 
class  ColorSequenceCycleH
 Creates a list of around 36 different colors, where one is easily distinguished from the preceding one. More...
 
class  ColorSequenceRainbow
 
struct  CompareFilterResults
 A simple struct to hold the result of the comparison filter. More...
 
class  CompareImageDataFilter
 Filter for comparing two mitk::Image objects by pixel values. More...
 
struct  ComponentsTrait
 Object for compile-time resolving of the number of components for given type. More...
 
struct  ComponentsTrait< false, T >
 Partial specialization for the ComponentsTraits in case of compound types. More...
 
class  CompressedImageContainer
 
class  ComputeContourSetNormalsFilter
 Filter to compute the normales for contours based on vtkPolygons. More...
 
class  ConcentrationCurveGenerator
 Converts a given 4D mitk::Image with MR signal values into a 4D mitk::Image with corresponding contrast agent concentration values. More...
 
class  ConcreteAIFBasedModelFactory
 
class  ConcreteModelFactoryBase
 
class  ConcreteModelParameterizerBase
 
class  Cone
 Data class containing an cylinder. More...
 
class  ConfigurationHolder
 
class  ConstraintCheckerBase
 This class is the base class for constraint checker. More...
 
class  ConstraintCheckerInterface
 
class  Contour
 Stores vertices for drawing a contour. More...
 
class  ContourElement
 Represents a contour in 3D space. A ContourElement is consisting of linked vertices implicitely defining the contour. They are stored in a double ended queue making it possible to add vertices at front and end of the contour and to iterate in both directions. To mark a vertex as a special one it can be set as a control point. More...
 
class  ContourMapper2D
 OpenGL-based mapper to display a mitk::Contour object in a 2D render window. More...
 
class  ContourModel
 ContourModel is a structure of linked vertices defining a contour in 3D space. The vertices are stored in a mitk::ContourElement for each timestep. The contour line segments are implicitly defined by the given linked vertices. By default two control points are linked by a straight line. It is possible to add vertices at the front and end of the contour and to iterate in both directions. More...
 
class  ContourModelGLMapper2D
 OpenGL-based mapper to display a mitk::Contour object in a 2D render window. More...
 
class  ContourModelGLMapper2DBase
 Base class for OpenGL based 2D mappers. Provides functionality to draw a contour. More...
 
class  ContourModelInteractor
 
class  ContourModelLiveWireInteractor
 
class  ContourModelMapper2D
 
class  ContourModelMapper3D
 
class  ContourModelReader
 
class  ContourModelSerializer
 
class  ContourModelSet
 
class  ContourModelSetGLMapper2D
 OpenGL-based mapper to display a mitk::ContourModelSet object containing several contours in a 2D render window. More...
 
class  ContourModelSetMapper3D
 
class  ContourModelSetReader
 
class  ContourModelSetSerializer
 
class  ContourModelSetSource
 Superclass of all classes generating ContourModels. More...
 
class  ContourModelSetToImageFilter
 Fills a given mitk::ContourModelSet into a given mitk::Image. More...
 
class  ContourModelSetWriter
 XML-based writer for mitk::ContourModelSet. More...
 
class  ContourModelSource
 Superclass of all classes generating ContourModels. More...
 
class  ContourModelSubDivisionFilter
 This filter interpolates a subdivision curve between control points of the contour. For inserting subpoints Dyn-Levin-Gregory (DLG) interpolation scheme is used. Interpolating a cruve subdivision is done by: F2i = Ci F2i+1 = -1/16Ci-1 + 9/16Ci + 9/16Ci+1 - 1/16Ci+2. More...
 
class  ContourModelToPointSetFilter
 Converts a contour set to a point set. More...
 
class  ContourModelToSurfaceFilter
 
class  ContourModelUtils
 Helpful methods for working with contours and images. More...
 
class  ContourModelWriter
 XML-based writer for mitk::ContourModels. More...
 
class  ContourObjectFactory
 
class  ContourSet
 
class  ContourSetMapper2D
 OpenGL-based mapper to display a mitk::Contour object in a 2D render window. More...
 
class  ContourSetToPointSetFilter
 Converts a contour set to a point set. More...
 
class  ContourSetVtkMapper3D
 Vtk-based mapper for mitk::Contour. More...
 
class  ContourTool
 Simple contour filling tool. More...
 
class  ContourUtils
 Helpful methods for working with contours and images. More...
 
class  ContourVtkMapper3D
 Vtk-based mapper for mitk::Contour. More...
 
class  Convert2Dto3DImageFilter
 Image Filter to convert 2D MITK images to 3D MITK images. More...
 
class  ConvertT2ConcentrationFunctor
 
class  ConvertToConcentrationAbsoluteFunctor
 
class  ConvertToConcentrationRelativeFunctor
 
class  ConvertToConcentrationTurboFlashFunctor
 
class  ConvertToConcentrationViaT1CalcFunctor
 
class  CoreObjectFactory
 
class  CoreObjectFactoryBase
 
class  CoreServicePointer
 A RAII helper class for core service objects. More...
 
class  CoreServices
 Access MITK core services. More...
 
class  CorrectorAlgorithm
 
class  CovarianceMatrixCalculator
 Class that computes the covariance matrices for every point in a Surface used in the A-ICP algorithm. More...
 
class  CreateDistanceImageFromSurfaceFilter
 This filter interpolates the 3D surface for a segmented area. The basis for the interpolation are the edge-points of contours that are drawn into an image. More...
 
class  CropTimestepsImageFilter
 Crops timesteps at 2D+t and 3D+t images. More...
 
class  CrosshairData
 
class  CrosshairManager
 The CrosshairManager takes care of the correct settings for the crosshair. More...
 
class  CrosshairVtkMapper2D
 Vtk-based 2D mapper for rendering a crosshair using vtk mapper. More...
 
class  Cuboid
 Data class containing an cuboid. More...
 
class  CurveDescriptionParameterBase
 
class  CurveParameterFunctor
 
class  CustomMimeType
 The CustomMimeType class represents a custom mime-type which may be registered as a service object. It should only be used for mime-type registration, see also mitk::MimeType. More...
 
class  CustomTagParser
 
class  Cylinder
 Data class containing an cylinder. More...
 
class  DataInteractor
 Base class from with interactors that handle DataNodes are to be derived. More...
 
class  DataNode
 Class for nodes of the DataTree. More...
 
class  DataNodeObject
 
class  DataNodeSelection
 
class  DataNodeSource
 Superclass of all classes generating data tree nodes (instances of class mitk::DataNode) as output. More...
 
class  DataStorage
 Data management class that handles 'was created by' relations. More...
 
class  DataStorageAccessRule
 The DataStorageAccessRule inherits from the ISchedulingRule class. DataStorageAccessRule are used to restrict the adding and removing of DataStorage nodes in multi-threaded scenarios. Only DataStorageNodes within different branches can be modified concurrently. The idea and its restrictions is explained in the sections and diagrams below. More...
 
class  DataStorageEditorInput
 An editor input based on a mitk::DataStorage. More...
 
class  DataStorageInspectorGenerator
 
class  DataStorageSelection
 
class  DescriptionParameterImageGeneratorBase
 
class  DescriptivePharmacokineticBrixModel
 
class  DescriptivePharmacokineticBrixModelFactory
 
class  DescriptivePharmacokineticBrixModelParameterizer
 
class  DescriptivePharmacokineticBrixModelValueBasedParameterizer
 
struct  DICOMCachedValueInfo
 
class  DICOMCachedValueLookupTable
 
class  DICOMDatasetAccess
 Interface to datasets that is presented to sorting classes such as DICOMDatasetSorter. More...
 
class  DICOMDatasetAccessingImageFrameInfo
 Defines an abstract base class for DICOM image frame infos with data access. More...
 
struct  DICOMDatasetFinding
 
class  DICOMDatasetSorter
 The sorting/splitting building-block of DICOMITKSeriesGDCMReader. More...
 
class  DICOMDCMTKTagScanner
 Encapsulates the tag scanning process for a set of DICOM files. More...
 
class  DICOMFileReader
 Interface for DICOM readers that produce mitk::Images. More...
 
class  DICOMFileReaderSelector
 Simple best-reader selection. More...
 
class  DICOMGDCMImageFrameInfo
 The dataset access implementation for DICOMITKSeriesGDCMReader, based on GDCM. More...
 
class  DICOMGDCMTagCache
 Tag cache implementation used by the DICOMGDCMTagScanner. More...
 
class  DICOMGDCMTagScanner
 Encapsulates the tag scanning process for a set of DICOM files. More...
 
class  DICOMGenericImageFrameInfo
 A generic storage class for image frame info with data access. More...
 
class  DICOMGenericTagCache
 Generic tag cache implementation. More...
 
class  DICOMImageBlockDescriptor
 Output descriptor for DICOMFileReader. More...
 
class  DICOMImageFrameInfo
 Describes a frame within a DICOM file. More...
 
class  DICOMImageIOActivator
 
struct  DICOMIOMetaInformationPropertyConstants
 The IOMetaInformationPropertyConsants struct. More...
 
class  DICOMITKSeriesGDCMReader
 Flexible reader based on itk::ImageSeriesReader and GDCM, for single-slice modalities like CT, MR, PET, CR, etc. More...
 
class  DICOMPMIO
 
class  DICOMPMPropertyHelper
 
class  DICOMQIPropertyHelper
 
class  DICOMReaderConfigurator
 Too-simple factory to create DICOMFileReaders. More...
 
class  DICOMRTMimeTypes
 
struct  DICOMSegmentationConstants
 
class  DICOMSegmentationIO
 
class  DICOMSegmentationPropertyHelper
 
class  DicomSeriesReader
 
class  DICOMSortByTag
 Compare two datasets by the value of a single tag (for use in DICOMTagBasedSorter). More...
 
class  DICOMSortCriterion
 A tag based sorting criterion for use in DICOMTagBasedSorter. More...
 
class  DICOMTag
 Representation of a DICOM tag. More...
 
class  DICOMTagBasedSorter
 Sort DICOM datasets based on configurable tags. More...
 
class  DICOMTagCache
 ... More...
 
class  DICOMTagPath
 Class is used to identify (nested) attributes in a DICOM dataset. In contrast to the class DICOMTag, which only specifies one specific tag, the tag path can identify nested attributes (like items in a DICOM sequence). In addition you may also specify wildcards for the selection index or complete elements of the path. More...
 
class  DICOMTagScanner
 Abstracts the tag scanning process for a set of DICOM files. More...
 
class  DICOMTagsOfInterestAddHelper
 
class  DICOMTagsOfInterestService
 DICOM tags of interest service. More...
 
class  DiffImageApplier
 Applies difference images to 3D images. More...
 
class  DiffSliceOperation
 An Operation for applying an edited slice to the volume. More...
 
class  DiffSliceOperationApplier
 Executes a DiffSliceOperation. More...
 
class  Dispatcher
 Manages event distribution. More...
 
class  DisplayActionEvent
 
class  DisplayActionEventBroadcast
 This class serves as an event state machine while simultaneously observing interaction events. It connects the actions from the event state machine .xml-file with concrete functions of this class. More...
 
class  DisplayActionEventHandler
 This class simplifies the process of adding an itkEventObject-itkCommand pair as an observer of a DisplayActionEventBroadcast instance. The 'SetObservableBroadcast'-function can be used to define the broadcast instance that should be observed. The 'ConnectDisplayActionEvent'-function can be used to add a an observer to the broadcast. Such an observer consists of a DisplayActionEvent (an itkEventObject) and a StdFunctionCommand (an itkCommand). The StdFunctionCommand is created inside the function by the given two std::functions. More...
 
class  DisplayActionEventHandlerDesynchronized
 
class  DisplayActionEventHandlerStd
 
class  DisplayActionEventHandlerSynchronized
 
class  DisplayCoordinateOperation
 Operation with information necessary for operations of DisplayVectorInteractor. More...
 
class  DisplayMoveEvent
 
class  DisplayScrollEvent
 
class  DisplaySetCrosshairEvent
 
class  DisplaySetLevelWindowEvent
 
class  DisplayZoomEvent
 
class  DoseImageVtkMapper2D
 Mapper to resample and display 2D slices of a 3D image. More...
 
class  DoubleProperty
 
class  DrawPaintbrushTool
 Paintbrush tool for InteractiveSegmentation. More...
 
class  DummyModelFitFunctor
 
class  EditableContourTool
 
class  Ellipsoid
 Data class containing an ellipsoid. More...
 
struct  EmptyType
 
class  EnhancedPointSetVtkMapper3D
 Alternative Vtk-based 3D mapper for mitk::PointSet. More...
 
class  EnumerationProperty
 
class  EnumerationPropertySerializer
 
class  EquiDistantBlocksSorter
 Split inputs into blocks of equidistant slices (for use in DICOMITKSeriesGDCMReader). More...
 
class  ErasePaintbrushTool
 Paintbrush tool for InteractiveSegmentation. More...
 
class  EraseRegionTool
 Erase the inside of a contour by filling the inside of a contour with the background pixel value. More...
 
class  EventConfig
 Configuration Object for Statemachines. More...
 
class  EventFactory
 Generates InteractionEvent-Objects/XML. More...
 
struct  EventInformerService
 
class  EventRecorder
 Observer that enables recoding of all user interaction with the render windows and storing it in an XML file. More...
 
class  EventStateMachine
 ‍** More...
 
class  ExampleDataStructure
 Example Data Structure. More...
 
class  ExampleDataStructureReaderService
 The reader service for the MITK example data type. More...
 
class  ExampleDataStructureSerializer
 Serializes mitk::ExampleDataStructure for mitk::SceneIO. More...
 
class  ExampleDataStructureWriterService
 
class  ExampleInteractor
 
class  ExampleIOMimeTypes
 
class  Exception
 An object of this class represents an exception of MITK. Please don't instantiate exceptions manually, but use the exception macros (file mitkExceptionMacro.h) instead. Simple use in your code is: More...
 
class  ExpDecayOffsetModel
 Implementation of a general exponential decay model with offset, following the function: y(x) = y-intercept * exp(-rate*x) + baseline. More...
 
class  ExpDecayOffsetModelFactory
 
class  ExpDecayOffsetModelParameterizer
 
class  ExponentialDecayModel
 Simple model of exponential decay in the form of: y(x) = y-intercept * exp(-x/lambda) with lambda being the decay constant. More...
 
class  ExponentialDecayModelFactory
 
class  ExponentialDecayModelParameterizer
 
class  ExponentialSaturationModel
 This generic model has the form: if x<onset: y(x) = baseline , else: y(x) = baseline + (y_final-baseline) * (1 - exp(-rate*(x-onset))) More...
 
class  ExponentialSaturationModelFactory
 
class  ExponentialSaturationModelParameterizer
 
class  ExtendedOneTissueCompartmentModel
 
class  ExtendedOneTissueCompartmentModelFactory
 
class  ExtendedOneTissueCompartmentModelParameterizer
 
class  ExtendedToftsModel
 Implementation of the Model function of the Tofts pharmacokinetic model, using an Aterial Input Function The Model calculates the Concentration-Time-Curve as a convolution of the plasma curve Cp (the AIF) and a tissue specific residue function (in this case an exponential: R(t) = ktrans * exp(-ktrans/ve * (t)) ). C(t) = vp * Cp(t) + conv(Cp(t),R(t)) The parameters ktrans, ve and ve are subject to the fitting routine. More...
 
class  ExtendedToftsModelFactory
 
class  ExtendedToftsModelParameterizer
 
class  ExternalProcessOutputEvent
 
class  ExternalProcessStdErrEvent
 
class  ExternalProcessStdOutEvent
 
class  ExtractDirectedPlaneImageFilter
 Extracts a 2D slice of arbitrary geometry from a 3D or 4D image. More...
 
class  ExtractDirectedPlaneImageFilterNew
 A filter that can extract a 2D slice from a 3D or 4D image especially if the image`s axes are rotated. More...
 
class  ExtractImageFilter
 Extracts a 2D slice from a 3D image. More...
 
class  ExtractSliceFilter
 ExtractSliceFilter extracts a 2D arbitrary oriented slice from a 3D volume. More...
 
class  ExtractSliceFilter2
 Extract an arbitrarily oriented 2-d image from a 3-d image. More...
 
class  ExtrudedContour
 Data class containing a bounding-object created by extruding a Contour along a vector. More...
 
class  ExtrudePlanarFigureFilter
 
struct  FeatureID
 
class  FeedbackContourTool
 Base class for tools that use a contour for feedback. More...
 
class  FileReader
 Interface class of readers that read from files. More...
 
class  FileReaderRegistry
 
class  FileReaderSelector
 
class  FileReaderWriterBase
 
class  FileSeriesReader
 
class  FileWriter
 Interface class of writers that write data to files. More...
 
class  FileWriterRegistry
 
class  FileWriterSelector
 
class  FileWriterWithInformation
 Interface for FileWriters with extra information. Should be merged into FileWriter. More...
 
class  FillRegionBaseTool
 Base class for tools that fill a connected region of a 2D slice. More...
 
class  FillRegionTool
 Fill the inside of a contour with the foreground pixel value. More...
 
class  FloatLookupTable
 
class  FloatLookupTableProperty
 
class  FloatProperty
 
class  FloatPropertyExtension
 Property extension for mitk::FloatProperty. More...
 
class  FormulaParser
 This class offers the functionality to evaluate simple mathematical formula strings (e.g. "3.5 + 4 * x * sin(x) - 1 / 2"). More...
 
class  FormulaParserException
 Exception class for all exceptions that are generated in the FormulaParser module. More...
 
class  GantryTiltInformation
 Gantry tilt analysis result. More...
 
class  GaussianNoiseFunctor
 
class  GenericIDRelationRule
 
class  GenericLookupTable
 Template class for generating lookup-tables. More...
 
class  GenericParamModel
 
class  GenericParamModelFactory
 
class  GenericParamModelParameterizer
 
class  GenericProperty
 
class  Geometry3D
 Standard implementation of BaseGeometry. More...
 
class  Geometry3DToXML
 
class  GeometryClipImageFilter
 Filter for clipping an image with a PlaneGeometry. More...
 
class  GeometryData
 Data class only having a BaseGeometry but not containing any specific data. More...
 
class  GeometryDataReaderService
 
class  GeometryDataSerializer
 Serializes mitk::GeometryData for mitk::SceneIO. More...
 
class  GeometryDataSource
 Superclass of all classes generating GeometryData (instances of class GeometryData) as output. More...
 
class  GeometryDataWriterService
 
class  GeometryTransformHolder
 
struct  GetComponentType
 Compile time resolving of the type of a component. More...
 
struct  GetPixelType
 
struct  GetPixelType< TypeList, Index, Step, Stop, true >
 
struct  GetPixelType< TypeList, Index, Step, true, OutOfRange >
 
struct  GetSuperclassType
 
struct  GetSuperclassType< T, true >
 
class  GIFCooccurenceMatrix
 
class  GIFCooccurenceMatrix2
 Calculates features based on the co-occurrence matrix. More...
 
class  GIFCurvatureStatistic
 Calculates features based on the co-occurrence matrix. More...
 
class  GIFFirstOrderHistogramStatistics
 Calculates first order features based on a histogram. More...
 
class  GIFFirstOrderNumericStatistics
 
class  GIFFirstOrderStatistics
 
class  GIFGreyLevelDistanceZone
 
class  GIFGreyLevelRunLength
 Calculates the Run Length based features. More...
 
class  GIFGreyLevelSizeZone
 
class  GIFImageDescriptionFeatures
 Calculates simple features that describe the given image / mask. More...
 
class  GIFIntensityVolumeHistogramFeatures
 Calculates the Intensity Volume Histogram features. More...
 
class  GIFLocalIntensity
 Calculates the local intensity features. More...
 
class  GIFNeighbourhoodGreyLevelDifference
 
class  GIFNeighbourhoodGreyToneDifferenceFeatures
 Calculates the Neighbourhood Grey Tone Difference Features. More...
 
class  GIFNeighbouringGreyLevelDependenceFeature
 Calculates the Neighbouring Grey Level Dependence Features. More...
 
class  GIFVolumetricDensityStatistics
 Calculates Volumetric Density Features. More...
 
class  GIFVolumetricStatistics
 Calculates simpel shape-related features. More...
 
class  Gizmo
 
class  GizmoInteractor
 
class  GizmoMapper2D
 
class  GizmoObjectFactory
 
class  GLMapper
 Base class of all OpenGL-based mappers. More...
 
class  GradientBackground
 
struct  GreyLevelDistanceZoneFeatures
 
class  GridRepresentationProperty
 
class  GridVolumeMapperProperty
 
class  GroupAddedEvent
 
class  GroupModifiedEvent
 
class  GroupRemovedEvent
 
class  GroupTagProperty
 Property class that has no value. More...
 
class  GrowCutSegmentationFilter
 A filter that performs a growcut image segmentation. More...
 
class  GrowCutTool
 
class  Handle
 Helper Class for realizing the handles of bounding object encapsulated by a geometry data. More...
 
class  HasMethodGetStaticNameOfClass
 
class  HasTypeSuperclass
 
class  HeightFieldSurfaceClipImageFilter
 Filter for clipping an image with an height-field represented by an mitk::Surface. More...
 
class  HistogramGenerator
 Provides an easy way to calculate an itk::Histogram for a mitk::Image. More...
 
class  HistogramStatisticsCalculator
 Computes basic histogram statistics such as Uniformity, UPP (Uniformity of positive entries), Entropy and Median (approximation) More...
 
class  HotspotMaskGenerator
 The HotspotMaskGenerator class is used when a hotspot has to be found in an image. A hotspot is the region of the image where the mean intensity is maximal (=brightest spot). It is usually used in PET scans. The identification of the hotspot is done as follows: First a cubic (or circular, if image is 2d) mask of predefined size is generated. This mask is then convolved with the input image (in fourier domain). The maximum value of the convolved image then corresponds to the hotspot. If a maskGenerator is set, only the pixels of the convolved image where the corresponding mask is == label are searched for the maximum value. More...
 
struct  IContextMenuAction
 
struct  IDataStorageInspectorProvider
 The common interface for all DataStorage inspector providers. More...
 
struct  IDataStorageReference
 
struct  IDataStorageService
 
class  Identifiable
 Base class of identifiable objects. More...
 
class  IDICOMTagsOfInterest
 Interface of DICOM tags of interest service. More...
 
struct  IFileIO
 Common interface for all MITK file reader and writer. More...
 
struct  IFileReader
 The common interface for all MITK file readers. More...
 
struct  IFileWriter
 The common interface of all MITK file writers. More...
 
class  IgnorePixelMaskGenerator
 The IgnorePixelMaskGenerator class is used to generate a mask that is zero for specific pixel values in the input image. This class requires an input image. More...
 
struct  ILifecycleAwarePart
 Interface for a MITK Workbench part which wants to be notified about lifecycle changes. More...
 
struct  ILinkedRenderWindowPart
 Extends the IRenderWindowPart interface with methods for controlling linked render windows. More...
 
class  Image
 Image class for storing images. More...
 
class  ImageAccessorBase
 
struct  ImageAccessorWaitLock
 This struct allows to make ImageAccessors wait for this particular ImageAccessor object. More...
 
class  ImageBasedParameterizationDelegate
 
class  ImageCaster
 This class is just a proxy for global functions which are needed by the python wrapping process since global functions cannot be wrapped. Static method can be wrapped though. More...
 
class  ImageChannelSelector
 Provides access to a channel of the input image. More...
 
class  ImageDataItem
 Internal class for managing references on sub-images. More...
 
class  ImageDescriptor
 An object to hold all essential information about an Image object. More...
 
class  ImageGenerationHelper
 
class  ImageGenerator
 generator for synthetic MITK images This is a helper class to generate synthetic MITK images (random or gradient). More...
 
class  ImageLiveWireContourModelFilter
 Calculates a LiveWire contour between two points in an image. More...
 
struct  ImageMappingInterpolator
 
class  ImageMaskGenerator
 
class  ImagePixelAccessor
 Provides templated image access for all inheriting classes. More...
 
class  ImagePixelReadAccessor
 Gives locked and index-based read access for a particular image part. The class provides several set- and get-methods, which allow an easy pixel access. It needs to know about pixel type and dimension of its image at compile time. More...
 
class  ImagePixelWriteAccessor
 Gives locked and index-based write access for a particular image part. The class provides several set- and get-methods, which allow an easy pixel access. It needs to know about pixel type and dimension of its image at compile time. More...
 
class  ImageReadAccessor
 ImageReadAccessor class to get locked read access for a particular image part. More...
 
class  ImageSerializer
 Serializes mitk::Image for mitk::SceneIO. More...
 
class  ImageSliceSelector
 Provides access to a slice of the input image. More...
 
class  ImageSource
 Superclass of all classes generating Images (instances of class Image) as output. More...
 
class  ImageStatisticsCalculator
 
struct  ImageStatisticsConstants
 
class  ImageStatisticsContainer
 Container class for storing a StatisticsObject for each time step. More...
 
class  ImageStatisticsContainerManager
 Returns the StatisticsContainer that was computed on given input (image/mask/planar figure) and is added as DataNode in a DataStorage. More...
 
class  ImageStatisticsHolder
 Class holding the statistics information about a single mitk::Image. More...
 
class  ImageTimeSelector
 Provides access to a volume at a specific time of the input image. More...
 
class  ImageToContourFilter
 A filter that can extract contours out of a 2D binary image. More...
 
class  ImageToContourModelFilter
 Base class for all filters with mitk::Image as input and mitk::ContourModel. More...
 
class  ImageToImageFilter
 Superclass of all classes having one or more Images as input and generating Images as output. More...
 
class  ImageToItk
 
class  ImageToPlanarFigureFilter
 Superclass of all classes having one or more Images as input and generating PlanarFigures as output. More...
 
class  ImageToPointCloudFilter
 The filter extracts the edge pixels of an image as points and stores them in an UnstructuredGrid. Every pixel which grey value is between the mean +- standard deviation * (2 or 3), will be extracted as point. The DetectionMethod can be set to choose if the doubled or tripled standard deviation is used. More...
 
class  ImageToSurfaceFilter
 Converts pixel data to surface data by using a threshold The mitkImageToSurfaceFilter is used to create a new surface out of an mitk image. The filter uses a threshold to define the surface. It is based on the vtkMarchingCube algorithm. By default a vtkPolyData surface based on an input threshold for the input image will be created. Optional it is possible to reduce the number of triangles/polygones [SetDecimate(mitk::ImageToSurfaceFilter::DecimatePro) and SetTargetReduction (float _arg)] or smooth the surface-data [SetSmooth(true), SetSmoothIteration(int smoothIteration) and SetSmoothRelaxation(float smoothRelaxation)]. More...
 
class  ImageToUnstructuredGridFilter
 Converts an Image into an UnstructuredGrid represented by Points. The filter uses a Threshold to extract every pixel, with value higher than the threshold, as point. If no threshold is set, every pixel is extracted as a point. More...
 
struct  ImageTypeTrait
 
struct  ImageTypeTrait< itk::VariableLengthVector< TPixelType >, VDimension >
 
struct  ImageTypeTrait< itk::VectorImage< TPixelType, VDimension >, 0 >
 
struct  ImageTypeTrait< T, 0 >
 
class  ImageVtkAccessor
 ImageVtkAccessor class provides any image read access which is required by Vtk methods. More...
 
class  ImageVtkLegacyIO
 
class  ImageVtkMapper2D
 Mapper to resample and display 2D slices of a 3D image. More...
 
class  ImageVtkReadAccessor
 ImageVtkReadAccessor class provides any image read access which is required by Vtk methods. More...
 
class  ImageVtkWriteAccessor
 ImageVtkWriteAccessor class provides any image write access which is required by Vtk methods. More...
 
class  ImageVtkXmlIO
 
class  ImageWriteAccessor
 ImageWriteAccessor class to get locked write-access for a particular image part. More...
 
class  ImageWriter
 Writer for mitk::Image. More...
 
class  ImageWriterFactory
 
struct  IMimeTypeProvider
 The IMimeTypeProvider service interface allows to query all registered mime types. More...
 
struct  IModelFitProvider
 The common interface for all model providers for model fitting. More...
 
class  IndexedValueFunctorBase
 
class  IndexedValueFunctorPolicy
 
class  InitialParameterizationDelegateBase
 
class  IntensityQuantifier
 
class  InteractionEvent
 
struct  InteractionEventConst
 Constants to describe Mouse Events and special Key Events. More...
 
class  InteractionEventHandler
 
class  InteractionEventObserver
 Base class to implement InteractionEventObservers. More...
 
class  InteractionKeyEvent
 Handles key events Takes a std::string for pressed key or special key description, mitk::ModifierKeys for modifiers. More...
 
class  InteractionPositionEvent
 Super class for all position events. More...
 
class  InteractionSchemeSwitcher
 
class  InteractionTestHelper
 Creates everything needed to load and playback interaction events. More...
 
class  InternalEvent
 Class to create events from within the application to signal about internal events. More...
 
class  IntLookupTable
 
class  IntLookupTableProperty
 
class  IntProperty
 
class  IntPropertyExtension
 Property extension for mitk::IntProperty. More...
 
class  InvalidPathNodeException
 
class  IOAdapter
 IOAdapter class is an adapter class for instantiation of IO process objects. Additional this interface defines the function CanReadFile(). This interface allows the target (object) the access to the adaptee (IO process object). More...
 
class  IOAdapterBase
 IOAdapterBase class is an abstract adapter class for IO process objects. More...
 
struct  IOConstants
 The IOConstants struct. More...
 
struct  IOMetaInformationPropertyConstants
 The IOMetaInformationPropertyConstants struct. More...
 
class  IOMimeTypes
 The IOMimeTypes class. More...
 
class  IOUtil
 A utility class to load and save data from/to the local file system. More...
 
class  IOVolumeSplitReason
 
class  IPersistable
 
class  IPersistenceService
 
class  IPreferences
 Interface to application preferences. More...
 
class  IPreferencesService
 A service for persistent application preferences. More...
 
class  IPreferencesStorage
 The backend for persistent preferences. More...
 
class  IPropertyAliases
 Interface of property aliases service. More...
 
class  IPropertyDescriptions
 Interface of property descriptions service. More...
 
class  IPropertyDeserialization
 Interface of property deserialization service. More...
 
class  IPropertyExtensions
 Interface of property extensions service. More...
 
class  IPropertyFilters
 Interface of property filters service. More...
 
class  IPropertyOwner
 
class  IPropertyPersistence
 Interface of property persistence service. More...
 
class  IPropertyProvider
 
class  IPropertyRelations
 Interface of property relations service. More...
 
class  IPythonService
 
struct  IRenderingManager
 An interface for accessing a mitk::RenderingManager instance. More...
 
struct  IRenderWindowPart
 Interface for a MITK Workbench Part providing a render window. More...
 
struct  IRenderWindowPartListener
 Interface for berry::IViewPart implementations to be notified about mitk::IRenderWindowPart lifecycle changes. More...
 
class  IsoDoseLevel
 Stores values needed for the representation/visualization of dose iso levels. More...
 
class  IsoDoseLevelSet
 Stores values needed for the representation/visualization of dose iso levels. More...
 
class  IsoDoseLevelSetProperty
 Property class for dose iso level sets. More...
 
class  IsoDoseLevelVectorProperty
 Property class for dose iso level vector. More...
 
struct  isPrimitiveType
 This is an implementation of a type trait to provide a compile-time check for PixelType used in the instantiation of an itk::Image. More...
 
struct  isPrimitiveType< char >
 Partial specialization (char) for the isPrimitiveType object. More...
 
struct  isPrimitiveType< double >
 Partial specialization (double) for the isPrimitiveType object. More...
 
struct  isPrimitiveType< float >
 Partial specialization (float) for the isPrimitiveType object. More...
 
struct  isPrimitiveType< int >
 Partial specialization (int) for the isPrimitiveType object. More...
 
struct  isPrimitiveType< long int >
 Partial specialization (long int) for the isPrimitiveType object. More...
 
struct  isPrimitiveType< long unsigned int >
 Partial specialization (long unsigned int) for the isPrimitiveType object. More...
 
struct  isPrimitiveType< short >
 Partial specialization (short) for the isPrimitiveType object. More...
 
struct  isPrimitiveType< signed char >
 Partial specialization (signed char) for the isPrimitiveType object. More...
 
struct  isPrimitiveType< unsigned char >
 Partial specialization (unsigned char) for the isPrimitiveType object. More...
 
struct  isPrimitiveType< unsigned int >
 Partial specialization (unsigned int) for the isPrimitiveType object. More...
 
struct  isPrimitiveType< unsigned short >
 Partial specialization (unsigned short) for the isPrimitiveType object. More...
 
class  ITKDICOMSeriesReaderHelper
 
class  ITKEventObserverGuard
 Convenience class that helps to manage the lifetime of itk event observers. More...
 
class  ItkImageFileIOFactory
 Create instances of ItkImageFileReader objects using an object factory. More...
 
class  ItkImageFileReader
 Reader to read file formats supported by itk. More...
 
class  ITKImageImport
 Pipelined import of itk::Image. More...
 
class  ItkImageIO
 
class  ItkLoggingAdapter
 Adapter that overwrites the standard itk logging output window and sends the logging messages to the MITK. More...
 
class  ItkMatrixHack
 Internal hack to set m_MatrixMTime of itk::MatrixOffsetTransformBase correctly after changing the matrix. For internal use only. More...
 
struct  IZombieViewPart
 Interface for MITK Workbench Views with special Zombie state handling. More...
 
class  Label
 A data structure describing a label. More...
 
class  LabelAddedEvent
 
class  LabelAnnotation3D
 Can display a high amount of 3D labels to a PointSet. More...
 
class  LabeledImageLookupTable
 
class  LabeledImageToSurfaceFilter
 
class  LabeledImageVolumeCalculator
 Class for calculating the volume (or area) for each label in a labeled image. More...
 
class  LabelHighlightGuard
 
class  LabelModifiedEvent
 
class  LabelRemovedEvent
 
class  LabelsChangedEvent
 
class  LabelSetImage
 LabelSetImage class for handling labels and layers in a segmentation session. More...
 
class  LabelSetImageSerializer
 Serializes mitk::LabelSetImage for mitk::SceneIO. More...
 
class  LabelSetImageSource
 Superclass of all classes generating labelset images (instances of class LabelSetImage) as output. More...
 
class  LabelSetImageSurfaceStampFilter
 
class  LabelSetImageToSurfaceFilter
 
class  LabelSetImageToSurfaceThreadedFilter
 
class  LabelSetImageVtkMapper2D
 Mapper to resample and display 2D slices of a 3D labelset image. More...
 
class  LabelStatisticsImageFilter
 
class  LandmarkProjector
 Base-class of landmark-projectors, which project the target landmarks to create source landmarks. More...
 
class  LandmarkProjectorBasedCurvedGeometry
 Superclass of AbstractTransformGeometry sub-classes defined by a set of landmarks. More...
 
class  LassoTool
 A 2D segmentation tool to draw polygon structures. More...
 
class  LayoutAnnotationRenderer
 The LayoutAnnotationRenderer is used for the layouted placement of mitk::Annotation Objects. More...
 
class  LegacyFileReaderService
 
class  LegacyFileWriterService
 
class  LegacyLabelSetImageIO
 
class  LevelWindow
 The LevelWindow class Class to store level/window values. More...
 
class  LevelWindowManager
 Provides access to the LevelWindowProperty object and LevelWindow of the "current" image. More...
 
class  LevelWindowPreset
 
class  LevelWindowProperty
 The LevelWindowProperty class Property for the mitk::LevelWindow. More...
 
class  LevenbergMarquardtModelFitFunctor
 
class  LimitedLinearUndo
 A linear undo model with one undo and one redo stack. More...
 
class  Line
 Describes a line. More...
 
class  LinearModel
 
class  LinearModelFactory
 
class  LineOperation
 Operation, that holds everything necessary for an operation on a line. Stores everything for de-/ selecting, inserting , moving and removing a line. More...
 
class  LiveWireTool2D
 A 2D segmentation tool based on a LiveWire approach. More...
 
struct  LocaleSwitch
 Convenience class to temporarily change the current locale. More...
 
class  LocalStorageHandler
 Templated class for management of LocalStorage implementations in Mappers. More...
 
class  LogBackend
 Log backend implementation for MITK. More...
 
class  LogBackendBase
 Interface for log backends that can be registered in the MITK log mechanism. More...
 
class  LogBackendCout
 Default backend of the MITK log mechanism. More...
 
class  LogBackendText
 Abstract superclass for text-based log backends. More...
 
struct  LogMessage
 A single log message (log event) of the MITK log mechanism. More...
 
class  LogoAnnotation
 Displays a logo on the renderwindow. More...
 
class  LookupTable
 The LookupTable class mitk wrapper for a vtkLookupTable. More...
 
class  LookupTableProperty
 The LookupTableProperty class Property to associate mitk::LookupTable to an mitk::DataNode. More...
 
class  LookupTablePropertySerializer
 Base class for objects that serialize BaseData types. More...
 
class  LookupTablePropertySerializerFactory
 
class  LookupTablePropertySerializerRegistrationMethod
 
class  LookupTableSource
 Base class for all objects which have an object of type mitkLookupTable as output. More...
 
class  ManualPlacementAnnotationRenderer
 The ManualPlacementAnnotationRenderer is used for the simple placement of mitk::Annotation Objects. More...
 
class  ManualSegmentationToSurfaceFilter
 Supplies a 3D surface from pre-processed segmentation. More...
 
class  ManualSelectingDICOMReaderService
 
class  MAPAlgorithmHelper
 MAPAlgorithmHelper. More...
 
class  MAPAlgorithmInfoObject
 berry wrapper for a MatchPoint algorithm deployment info More...
 
class  MAPAlgorithmInfoSelection
 Used by plugins to communicate selections of deployed algorithms. More...
 
struct  MapCompositePixelType
 Object for compile-time translation of a composite pixel type into an itk::ImageIOBase::IOPixelType information. More...
 
struct  MapCompositePixelType< itk::CovariantVector< C, N > >
 
struct  MapCompositePixelType< itk::DiffusionTensor3D< C > >
 
struct  MapCompositePixelType< itk::FixedArray< C, N > >
 
struct  MapCompositePixelType< itk::Matrix< C, N > >
 
struct  MapCompositePixelType< itk::RGBAPixel< C > >
 
struct  MapCompositePixelType< itk::RGBPixel< C > >
 
struct  MapCompositePixelType< itk::VariableLengthVector< C > >
 
struct  MapCompositePixelType< itk::Vector< C, N > >
 
class  Mapper
 Base class of all mappers, Vtk as well as OpenGL mappers. More...
 
struct  MapPixelComponentType
 
struct  MapPixelType
 Object for compile-time translation of a pixel type into an itk::ImageIOBase::IOPixelType information. More...
 
struct  MapPixelType< T, true >
 Partial specialization for setting the IOPixelType for primitive types to SCALAR. More...
 
class  MAPRegistrationWrapper
 MAPRegistrationWrapper Wrapper class to allow the handling of MatchPoint registration objects as mitk data (e.g. in the data explorer). More...
 
class  MAPRegistrationWrapperIO
 
class  MAPRegistrationWrapperObjectFactory
 
class  MAPRegistrationWrapperSerializer
 Serializes mitk::MAPRegistrationWrapper for mitk::SceneIO. More...
 
class  MaskAndCutRoiImageFilter
 Cuts a region of interest (ROI) out of an image. More...
 
class  MaskCleaningOperation
 Executes operations to clean-up Masks. More...
 
class  MaskedAlgorithmHelper
 MaskedAlgorithmHelper Helper class as an easy bridge to set mitk images as masks for registration algorithms. It is assumed that the Image indicates the mask by pixel values != 0. More...
 
class  MaskedDynamicImageStatisticsGenerator
 
class  MaskGenerator
 Base Class for all Mask Generators. Mask generators are classes that provide functionality for the creation of binary (or unsigned short) masks that can be applied to an image. See derived classes for more information. More...
 
class  MaskImageFilter
 
class  MaskUtilities
 Utility class for mask operations. It checks whether an image and a mask are compatible (spacing, orientation, etc...) and it can also crop an image to the LargestPossibleRegion of the Mask. More...
 
class  Material
 
class  Matrix
 
class  MaximumCurveDescriptionParameter
 
class  MeanResidenceTimeDescriptionParameter
 
class  MedSAMTool
 Medical Segment Anything Model interactive 2D tool class. More...
 
class  MemoryIsLockedException
 
class  Message
 Event/message/notification class. More...
 
class  Message1
 
class  Message2
 
class  Message3
 
class  Message4
 
class  MessageAbstractDelegate
 
class  MessageAbstractDelegate1
 
class  MessageAbstractDelegate2
 
class  MessageAbstractDelegate3
 
class  MessageAbstractDelegate4
 
class  MessageBase
 
class  MessageDelegate
 
class  MessageDelegate1
 
class  MessageDelegate2
 
class  MessageDelegate3
 
class  MessageDelegate4
 
class  MimeType
 The MimeType class represents a registered mime-type. It is an immutable wrapper for mitk::CustomMimeType that makes memory handling easier by providing a stack-object for the user. More...
 
class  MimeTypeProvider
 
struct  MimeTypeTrackerTypeTraits
 
class  MitkCESTIOMimeTypes
 Provides the custom mime types for MitkCEST. More...
 
class  MitkDICOMPMIOMimeTypes
 Provides the custom mime types for dicom qi objects loaded with DCMQI. More...
 
class  MitkDICOMSEGIOMimeTypes
 Provides the custom mime types for dicom qi objects loaded with DCMQI. More...
 
class  mitkModelTestFixture
 
class  MITKRegistrationHelper
 MITKRegistrationHelper. More...
 
class  MITKRegistrationWrapperMapper2D
 
class  MITKRegistrationWrapperMapper3D
 
class  MITKRegistrationWrapperMapperBase
 
class  ModalityProperty
 Enumerates all known modalities. More...
 
class  ModelBase
 Base class for (dynamic) models. A model can be used to calculate its signal given the discrete time grid of the signal and the parameters of the model.
A model has 3 types of parameters:
. More...
 
class  ModelBasedValueFunctorBase
 
class  ModelDataGenerationFunctor
 
class  ModelFactoryBase
 
struct  ModelFitConstants
 
class  ModelFitCostFunctionInterface
 
class  ModelFitFunctorBase
 
class  ModelFitFunctorPolicy
 
class  ModelFitInfoSignalGenerationFunctor
 
struct  ModelFitPlotData
 
class  ModelFitProviderBase
 Base class for model fit provider. More...
 
class  ModelFitResultRelationRule
 
class  ModelGenerator
 
class  ModelParameterizerBase
 
struct  ModelParams
 nnUNet parameter request object holding all model parameters for input. Also holds output temporary directory path. More...
 
class  ModelSignalImageGenerator
 
class  ModelTraitsInterface
 
class  ModifiedLock
 ModifiedLock manages the calls of Modified() functions. More...
 
struct  MonaiAppMetadata
 Struct to store MonaiLabel server metadata including all model infos. More...
 
class  MonaiLabel2DTool
 MonaiLabel segmentation 2D tool. More...
 
class  MonaiLabel3DTool
 MonaiLabel segmentation 3D tool. More...
 
struct  MonaiLabelRequest
 Request class to pack model and other necessary server information from GUI. More...
 
class  MonaiLabelTool
 MonaiLabel segmentation tool base class. More...
 
struct  MonaiModelInfo
 Struct to hold featured models individual info. More...
 
class  MorphologicalOperations
 Encapsulates several morphological operations that can be performed on segmentations. More...
 
class  MouseDoubleClickEvent
 
class  MouseMoveEvent
 
class  MousePressEvent
 
class  MouseReleaseEvent
 
class  MouseWheelEvent
 
class  MovieGenerator
 
class  MovieGeneratorWin32
 
class  MRNormLinearStatisticBasedFilter
 
class  MRNormTwoRegionsBasedFilter
 
class  MultiComponentImageDataComparisonFilter
 Filter for comparing two multi channel mitk::Image objects by channel wise by pixel values. More...
 
class  MultiLabelIOHelper
 The MultiLabelIOHelper is a static helper class that supports serialization of mitk::LabelSetImage. More...
 
class  MultiLabelMaskGenerator
 Class that allows to generate masks (for statistic computation) out of multi label segmentations. More...
 
class  MultilabelObjectFactory
 
class  MultiLabelSegmentationIO
 
class  MultiLabelSegmentationVtkMapper3D
 Mapper to resample and display 2D slices of a 3D labelset image. More...
 
class  MultiModalAffineDefaultRegistrationAlgorithm
 
class  MultiModalRigidDefaultRegistrationAlgorithm
 
class  MultiModalTranslationDefaultRegistrationAlgorithm
 
class  MultiStepper
 Helper class to step through a list. More...
 
class  MVConstrainedCostFunctionDecorator
 This class is used to add constraints to any multi valued model fit cost function. More...
 
class  MVModelFitCostFunction
 
class  nnUNetTool
 nnUNet segmentation tool. More...
 
class  NodePredicateAnd
 Composite predicate that forms a logical AND relation from its child predicates. More...
 
class  NodePredicateBase
 Interface for evaluation conditions used in the DataStorage class GetSubset() method. More...
 
class  NodePredicateCompositeBase
 Base class for all predicates that can have child predicates (e.g. AND/OR) More...
 
class  NodePredicateData
 Predicate that evaluates if the given DataNodes data object pointer equals a given pointer. More...
 
class  NodePredicateDataProperty
 Predicate that evaluates if the data of a given DataNode has a specific property. If the second parameter is nullptr, it will only be checked whether there is a property with the specified name for the data instance of the node. More...
 
class  NodePredicateDataType
 Predicate that evaluates if the given DataNodes data object is of a specific data type. More...
 
class  NodePredicateDataUID
 Predicate that compares the data UID of the given DataNode to a specific UID. More...
 
class  NodePredicateDimension
 Predicate that evaluates if the given DataNodes data object has the specified dimension, for datasets where dimension is applicable. More...
 
class  NodePredicateFunction
 Predicate that transfers the check to a specific Callable. More...
 
class  NodePredicateGeometry
 Predicate that evaluates if the given DataNode's data object has the same geometry (in terms of spacing, origin, orientation) like the reference geometry. More...
 
class  NodePredicateNot
 Composite predicate that negates its child predicate Changed: NodePredicateNot now derives from NodePredicateCompositeBase though it really holds only one subpredicate at any time. But logically any Predicate that has one or more subpredicate is a CompositePredicate. More...
 
class  NodePredicateOr
 Composite predicate that forms a logical OR relation from its child predicates. More...
 
class  NodePredicateProperty
 Predicate that evaluates if the given DataNode has a specific property. If the second parameter is nullptr, it will only be checked whether there is a property with the specified name. If a renderer is specified in the third parameter the renderer-specific property will be checked. If this parameter is nullptr or not specified, then the non-renderer-specific property will be checked. More...
 
class  NodePredicateSubGeometry
 Predicate that evaluates if the given DataNode's data object has a geometry that is a sub geometry of the reference geometry. Sub geometry means that both geometries have the same voxel grid (same spacing, same axes, origin is on voxel grid), but the bounding box of the checked geometry is contained or equal to the bounding box of the reference geometry.
One can either check the whole time geometry of the data node by defining a reference time geometry or check against one given2 reference base geometry. If the predicate should check against a base geometry, you can specify the timepoint of the data's time geometry that should be checked. If no timepoint is defined the predicate will evaluate the data geometry in the first timestep. Evaluates to "false" for unsupported or undefined data objects/geometries. More...
 
struct  NodeSelectionConstants
 
class  NonBlockingAlgorithm
 
class  NonBlockingAlgorithmEvent
 
class  NonStaticArithmeticOperation
 
class  NoPropertyRelationException
 
class  NormalDirectionConsistencySorter
 Makes sure that the order of files is along the image plane normals. More...
 
class  NormalizedSumOfSquaredDifferencesFitCostFunction
 
class  NullLogStream
 Simulates a std::cout stream but does nothing. More...
 
class  OneTissueCompartmentModel
 
class  OneTissueCompartmentModelFactory
 
class  OneTissueCompartmentModelParameterizer
 
class  Operation
 Base class of all Operation-classes. More...
 
class  OperationActor
 abstract class, that can be used by Undo to undo an operation. More...
 
class  OperationEndEvent
 
class  OperationEvent
 Represents a pair of operations: undo and the according redo. More...
 
class  OtsuSegmentationFilter
 A filter that performs a multiple threshold otsu image segmentation. More...
 
class  OtsuTool3D
 
class  PadImageFilter
 PadImageFilter class pads the first input image to the size of the second input image. Two Images have to be set. The first image is the image to pad. The second image defines the pad size. It is also possible to use an included binary filter. More...
 
class  PaintbrushTool
 Paintbrush tool for InteractiveSegmentation. More...
 
class  ParamapPresetsParser
 
class  ParameterFitImageGeneratorBase
 
class  ParameterToolEvent
 Tool event with 1 parameter. More...
 
class  PersistenceActivator
 
class  PersistenceService
 
class  PickingTool
 Extracts a single region from a segmentation image and creates a new image with same geometry of the input image. More...
 
class  PixelBasedDescriptionParameterImageGenerator
 
class  PixelBasedParameterFitImageGenerator
 
class  PixelType
 Class for defining the data type of pixels. More...
 
struct  PixelTypeLength
 
struct  PixelTypeList
 
struct  PixelTypeList< EmptyType, EmptyType, EmptyType, EmptyType, EmptyType, EmptyType, EmptyType, EmptyType, EmptyType, EmptyType >
 
struct  PixelTypeSwitch
 
struct  PixelTypeSwitch< TypeList, Index, true >
 
struct  PixelTypeTrait
 Compile-time trait for resolving the ValueType from an ItkImageType. More...
 
struct  PixelTypeTrait< false, T >
 Partial specialization for the PixelTypeTrait. More...
 
class  PlanarAngle
 Implementation of PlanarFigure to display an angle through three control points. More...
 
class  PlanarArrow
 Implementation of PlanarFigure representing an arrow through two control points. More...
 
class  PlanarBezierCurve
 
class  PlanarCircle
 Implementation of PlanarFigure representing a circle either through two control points or by one control point (fixed radius mode) The mode is defined by the chosen constructor. More...
 
class  PlanarCross
 Implementation of PlanarFigure modeling a cross with two orthogonal lines on a plane. More...
 
class  PlanarDoubleEllipse
 Planar representing a double ellipse. The double ellipse is either represented by 4 control points (center, outer major axis, outer minor axis and inner major axis) or be one control point (center, fixed size mode). The mode is selected via the constructor. More...
 
class  PlanarEllipse
 Implementation of PlanarFigure representing a circle through two control points. More...
 
class  PlanarFigure
 Base-class for geometric planar (2D) figures, such as lines, circles, rectangles, polygons, etc. More...
 
class  PlanarFigureControlPointStyleProperty
 Defines the rendering style of control points for PlanarFigure objects. More...
 
class  PlanarFigureInteractor
 Interaction with mitk::PlanarFigure objects via control-points. More...
 
class  PlanarFigureIO
 
class  PlanarFigureMapper2D
 OpenGL-based mapper to render display sub-class instances of mitk::PlanarFigure. More...
 
class  PlanarFigureMaskGenerator
 Derived from MaskGenerator. This class is used to convert a mitk::PlanarFigure into a binary image mask. More...
 
class  PlanarFigureObjectFactory
 
class  PlanarFigureSerializer
 Serializes mitk::Surface for mitk::SceneIO. More...
 
class  PlanarFigureSource
 Base class for all filters which have an object of type mitk::PlanarFigure as output. More...
 
class  PlanarFigureToPlanarFigureFilter
 Base class for all filters which have an object of type mitk::PlanarFigure as input and output. More...
 
class  PlanarFigureVtkMapper3D
 
class  PlanarFourPointAngle
 Implementation of PlanarFigure representing a four point angle, which is defined by two non-intersecting lines in 2D. Each of those lines is defined by two control points. More...
 
class  PlanarLine
 Implementation of PlanarFigure representing a line through two control points. More...
 
class  PlanarPolygon
 Implementation of PlanarFigure representing a polygon with two or more control points. More...
 
class  PlanarRectangle
 Implementation of PlanarFigure representing a polygon with two or more control points. More...
 
class  PlanarSubdivisionPolygon
 Implementation of PlanarFigure representing a polygon with two or more control points. More...
 
class  Plane
 Plane surface representation. More...
 
class  PlaneFit
 
class  PlaneGeometry
 Describes a two-dimensional, rectangular plane. More...
 
class  PlaneGeometryData
 Data class containing PlaneGeometry objects. More...
 
class  PlaneGeometryDataMapper2D
 Vtk-based 2D mapper for rendering a crosshair with the plane geometry. More...
 
class  PlaneGeometryDataToSurfaceFilter
 Superclass of all classes having a PlaneGeometryData as input and generating Images as output. More...
 
class  PlaneGeometryDataVtkMapper3D
 Vtk-based mapper to display a PlaneGeometry in a 3D window. More...
 
class  PlaneLandmarkProjector
 Thin-plate-spline-based landmark-based curved geometry. More...
 
class  PlaneOperation
 Operation for setting a plane (defined by its origin and normal) More...
 
class  PlaneOrientationProperty
 
class  PlanePositionManagerService
 
class  PlaneProposer
 The PlaneProposer creates a new plane based on an input point cloud. More...
 
class  PlotDataCurve
 
class  Point
 
class  Point2dProperty
 
class  Point3dProperty
 
class  Point3iProperty
 
class  Point4dProperty
 
class  PointLocator
 
class  PointOperation
 Operation that handles all actions on one Point. Stores everything for Adding, Moving and Deleting a Point. More...
 
class  PointSet
 Data structure which stores a set of points. More...
 
class  PointSetDataInteractor
 Implementation of the PointSetInteractor. More...
 
class  PointSetDifferenceStatisticsCalculator
 Class for calculating the difference between two corresponding point sets. The user can access the single distances between corresponding points as well as a complete statistic (mean, sd, rms, median, max, min) The point sets must be of equal size! More...
 
class  PointSetIOFactory
 Create instances of PointSetReader objects using an object factory. More...
 
class  PointSetReader
 reads xml representations of mitk::PointSets from a file More...
 
class  PointSetReaderService
 
class  PointSetSerializer
 Serializes mitk::Surface for mitk::SceneIO. More...
 
class  PointSetShapeProperty
 
class  PointSetSource
 Superclass of all classes generating point sets (instances of class mitk::PointSet) as output. More...
 
class  PointSetStatisticsCalculator
 Class for calculating statistics (like standard derivation, RMS, mean, etc.) for a PointSet. More...
 
class  PointSetToPointSetFilter
 Superclass of all classes/algorithms having one or more PointSets as input and output. More...
 
class  PointSetVtkMapper2D
 Vtk-based 2D mapper for PointSet. More...
 
class  PointSetVtkMapper3D
 Vtk-based mapper for PointSet. More...
 
class  PointSetWriter
 XML-based writer for mitk::PointSets. More...
 
class  PointSetWriterFactory
 
class  PointSetWriterService
 
struct  PreferenceListReaderOptionsFunctor
 Option callback functor with a preference list/ black list option selection strategy. More...
 
class  Preferences
 Implementation of the IPreferences interface. More...
 
class  PreferencesService
 Implementation of the IPreferencesService interface. More...
 
class  ProcessExecutor
 You may register an observer for an ExternalProcessOutputEvent, ExternalProcessStdOutEvent or ExternalProcessStdErrEvent in order to get notified of any output. More...
 
class  ProcessingError
 
class  ProgressBar
 Sending a message to the applications ProgressBar. More...
 
class  ProgressBarImplementation
 GUI independent Interface for all Gui dependent implementations of a ProgressBar. More...
 
class  PropertyAliases
 
class  PropertyDescriptions
 
class  PropertyDeserialization
 
class  PropertyEditor
 
class  PropertyExtension
 Base class for all property extensions. More...
 
class  PropertyExtensions
 
class  PropertyFilter
 Consists of blacklist and whitelist entries. More...
 
class  PropertyFilters
 
class  PropertyKeyPath
 Class that can be used to specify nested or wild carded property keys. E.g. for the use in context of the property persistence service or the property relation service.
Following assumptions are made /preconditions are defined: More...
 
class  PropertyList
 Key-value list holding instances of BaseProperty. More...
 
class  PropertyListDeserializer
 Deserializes a mitk::PropertyList. More...
 
class  PropertyListDeserializerV1
 Deserializes a mitk::PropertyList. More...
 
class  PropertyListReplacedObserver
 
class  PropertyListSerializer
 Serializes a mitk::PropertyList. More...
 
class  PropertyListsXmlFileReaderAndWriter
 
class  PropertyObserver
 
class  PropertyPersistence
 
class  PropertyPersistenceInfo
 Property persistence info. This class is used to specify the way the persistance of a property of BaseData derived instances is handled. The info specifies the key for property, as well as the mime type the info is defined for and should be used. Additionally the functions for deserialization and serialization of the property can be defined. As default. More...
 
class  PropertyRelationRuleBase
 
class  PropertyRelations
 
class  PropertyView
 
class  ProportionalTimeGeometry
 
class  ProportionalTimeGeometryToXML
 
class  ProvisioningInfo
 
class  PseudoLogStream
 Simulates a std::cout stream. More...
 
class  PythonCommandObserver
 
class  PythonService
 
struct  PythonVariable
 
class  QMAPAlgorithmModel
 
class  RandomImageSampler
 
class  RawImageFileReader
 Reader to read raw image files. More...
 
class  RawImageFileReaderService
 
class  ReduceContourSetFilter
 A filter that reduces the number of points of contours represented by a mitk::Surface. More...
 
class  ReducedChiSquareFitCostFunction
 
class  ReferenceCountWatcher
 Keeps track of the reference count of an object even if it is destroyed. More...
 
class  RegEvalStyleProperty
 
class  RegEvaluationMapper2D
 Mapper to resample and display 2D slices of registration evaluation visualization. More...
 
class  RegEvaluationObject
 RegEvaluationObject Class that contains all data to realize an evaluation of registrations via images. More...
 
class  RegEvaluationObjectFactory
 
class  RegEvalWipeStyleProperty
 
class  RegionGrowingTool
 A slice based region growing tool. More...
 
class  RegVisColorStyleProperty
 
class  RegVisDirectionProperty
 
class  RegVisStyleProperty
 
class  RemeshFilter
 Encapsulates mitk::Remesh function as filter. More...
 
class  RendererAccess
 
class  RenderingManager
 Manager for coordinating the rendering process. More...
 
class  RenderingManagerFactory
 Factory interface for facilitating the usage of a platform-specific mitk::RenderingManager instance. More...
 
class  RenderingModeProperty
 
class  RenderingTestHelper
 
class  RenderWindow
 mitkRenderWindow integrates the MITK rendering mechanism into VTK and is NOT QT dependent More...
 
class  RenderWindowBase
 Base class of MITK RenderWindows. More...
 
class  RenderWindowFrame
 
class  RenderWindowLayerController
 
class  RenderWindowViewDirectionController
 
class  ResliceMethodProperty
 
class  RestorePlanePositionOperation
 
class  ResultAvailable
 
class  RGBToRGBACastImageFilter
 
class  ROI
 A collection of region of interests (ROIs). More...
 
class  ROIBasedParameterFitImageGenerator
 
class  ROIIO
 
class  ROIIOModuleActivator
 
class  ROIMapper2D
 
class  ROIMapper3D
 
class  ROIMapperLocalStorage
 Common base class for both 2-d and 3-d ROI mapper local storages. More...
 
class  ROIObjectFactory
 
class  ROISerializer
 
class  RotationOperation
 Operation, that holds everything necessary for an rotation operation on mitk::BaseData. More...
 
struct  RTConstants
 
struct  RTCTKEventConstants
 
class  RTDoseReaderService
 RTDoseReaderService reads DICOM files of modality RTDOSE. More...
 
class  RTPlanReaderService
 RTPlanReaderService reads DICOM files of modality RTPLAN. More...
 
class  RTStructureSetReaderService
 
struct  RTUIConstants
 
class  ScalarListLookupTable
 Data class for modelfit properties that store a map of lists (e.g. static parameters). More...
 
class  ScalarListLookupTablePropertySerializer
 Serializer for the ScalarListLookupTableProperty so it can be written and read from file. More...
 
class  ScaleLegendAnnotation
 Displays configurable scales on the renderwindow. The scale is determined by the image spacing. More...
 
class  ScaleOperation
 The ScaleOperation is an operation to scale any mitk::BaseGeometry. More...
 
class  SceneIO
 
class  SceneReader
 
class  SceneReaderV1
 
class  SegmentAnythingProcessExecutor
 You may register an observer for an ExternalProcessOutputEvent, ExternalProcessStdOutEvent or ExternalProcessStdErrEvent in order to get notified of any output. More...
 
class  SegmentAnythingPythonService
 Segment Anything Model Python process handler class. More...
 
class  SegmentAnythingTool
 Segment Anything Model interactive 2D tool class. More...
 
class  SegmentationInterpolationAlgorithm
 Interface class for interpolation algorithms. More...
 
class  SegmentationInterpolationController
 Generates interpolations of 2D slices. More...
 
class  SegmentationObjectFactory
 
class  SegmentationSink
 
class  SegmentationsProcessingTool
 Batch processing of all selected segmentations/data. More...
 
class  SegmentationTaskList
 A list of segmentation tasks. More...
 
class  SegmentationTaskListIO
 
class  SegmentationTaskListSerializer
 
class  SegTool2D
 Abstract base class for segmentation tools. More...
 
class  SegWithPreviewTool
 Base class for any auto segmentation tool that provides a preview of the new segmentation. More...
 
class  ShapeBasedInterpolationAlgorithm
 Shape-based binary image interpolation. More...
 
class  ShowSegmentationAsSmoothedSurface
 
class  ShowSegmentationAsSurface
 
struct  SIGNALCONSTANTS
 
class  SimpleBarrierConstraintChecker
 This class implements constraints as simple barrier functions. More...
 
class  SimpleFunctorBase
 
class  SimpleFunctorPolicy
 
class  SimpleHistogram
 Abstract superclass for histograms with double values. Classes which are deriving from this class can be cached in the same way. More...
 
class  SimpleHistogramCache
 
class  SimpleImageHistogram
 
class  SimpleUnstructuredGridHistogram
 
class  SimpleVolumeDICOMSeriesReaderService
 
class  SinglePointDataInteractor
 Implementation of the single point interaction. More...
 
class  SlicedData
 Super class of data objects consisting of slices. More...
 
class  SlicedGeometry3D
 Describes the geometry of a data object consisting of slices. More...
 
class  SliceNavigationController
 Controls the selection of the slice the associated BaseRenderer will display. More...
 
class  SmartPointerProperty
 Property containing a smart-pointer. More...
 
class  SortByImagePositionPatient
 Sort by distance of image origin along image normal (for use in DICOMTagBasedSorter). More...
 
class  SourceImageRelationRule
 
class  SplineVtkMapper3D
 Vtk-based mapper for Splines. More...
 
class  SquaredDifferencesFitCostFunction
 
class  StandaloneDataStorage
 Data management class that handles 'was created by' relations. More...
 
class  StandardFileLocations
 Provides a method to look for configuration and option files etc. More...
 
class  StandardToftsModel
 Implementation of the Model function of the Tofts pharmacokinetic model, using an Aterial Input Function The Model calculates the Concentration-Time-Curve as a convolution of the plasma curve Cp (the AIF) and a tissue specific residue function (in this case an exponential: R(t) = ktrans * exp(-ktrans/ve * (t)) ). C(t) = vp * Cp(t) + conv(Cp(t),R(t)) The parameters ktrans, ve and ve are subject to the fitting routine. More...
 
class  StandardToftsModelFactory
 
class  StandardToftsModelParameterizer
 
class  StateMachineAction
 Represents an action, that is executed after a certain event (in statemachine-mechanism) TODO: implement: Is used to connect the Action-Id in an XML Statemachine description with a functor in the. More...
 
class  StateMachineCondition
 Represents a condition, that has to be fulfilled in order to execute a state machine transition after a certain event. More...
 
class  StateMachineContainer
 
class  StateMachineState
 
class  StateMachineTransition
 Connects two states, and holds references to corresponding actions and conditions. More...
 
struct  StaticNameOfClass
 
struct  StaticNameOfClass< T, true >
 
class  StatisticsImageFilter
 
class  StatisticsToImageRelationRule
 
class  StatisticsToMaskRelationRule
 
class  StatusBar
 Sending a message to the applications StatusBar. More...
 
class  StatusBarImplementation
 GUI independent Interface for all Gui dependent implementations of a StatusBar. More...
 
class  StdFunctionCommand
 
class  Stepper
 Helper class to step through a list. More...
 
class  STLFileIOFactory
 Create instances of STLFileReader objects using an object factory. More...
 
class  STLFileReader
 Reader to read files in stl-format. More...
 
class  StringLookupTable
 
class  StringLookupTableProperty
 
class  StringProperty
 Property for strings. More...
 
class  SubImageSelector
 Base class of all classes providing access to parts of an image. More...
 
class  SubtractContourTool
 Fill the inside of a contour with 1. More...
 
class  SumOfSquaredDifferencesFitCostFunction
 
class  Surface
 Class for storing surfaces (vtkPolyData). More...
 
class  SurfaceDeformationDataInteractor3D
 SurfaceDeformation interaction with objects in 3D windows. More...
 
class  SurfaceInterpolationController
 
class  SurfaceOperation
 
class  SurfaceSerializer
 Serializes mitk::Surface for mitk::SceneIO. More...
 
class  SurfaceSource
 Superclass of all classes generating surfaces (instances of class Surface) as output. More...
 
class  SurfaceStampImageFilter
 Converts surface data to pixel data. Requires a surface and an image, which header information defines the output image. More...
 
class  SurfaceStlIO
 
class  SurfaceToImageFilter
 Converts surface data to pixel data. Requires a surface and an image, which header information defines the output image. More...
 
class  SurfaceToPointSetFilter
 This filter converts the input surface into a point set. The output point set contains every point exactly one time (no duplicated points like in the stl-format). More...
 
class  SurfaceToSurfaceFilter
 Superclass of all classes getting surfaces (instances of class Surface) as input and generating surfaces as output. More...
 
class  SurfaceVtkIO
 
class  SurfaceVtkLegacyIO
 
class  SurfaceVtkMapper2D
 Vtk-based mapper for cutting 2D slices out of Surfaces. More...
 
class  SurfaceVtkMapper3D
 Vtk-based mapper for Surfaces. More...
 
class  SurfaceVtkWriter
 VTK-based writer for mitk::Surface. More...
 
class  SurfaceVtkWriterFactory
 
class  SurfaceVtkXmlIO
 
class  SVModelFitCostFunction
 
class  TActionFunctor
 Base class of ActionFunctors, to provide an easy to connect actions with functions. More...
 
class  TemporalJoinImagesFilter
 
class  TemporoSpatialStringProperty
 Property for time and space resolved string values. More...
 
class  TestCaller
 A test caller for parameterized tests. More...
 
class  TestDICOMLoading
 
class  TestFailedException
 Indicate a failed test. More...
 
class  TestFixture
 Test fixture for parameterized tests. More...
 
class  TestingRenderingManager
 
class  TestingRenderingManagerFactory
 
class  TestManager
 
class  TestModel
 
class  TestModelFactory
 
class  TestNotRunException
 Specialized mitk::Exception for skipped tests. More...
 
class  TextAnnotation2D
 Displays text on the renderwindow. More...
 
class  TextAnnotation3D
 Displays at 3D position, always facing the camera. More...
 
class  ThinPlateSplineCurvedGeometry
 Thin-plate-spline-based landmark-based curved geometry. More...
 
class  ThreeDnTDICOMSeriesReader
 Extends DICOMITKSeriesGDCMReader by sorting/grouping into 3D+t image blocks. More...
 
class  ThreeStepLinearModel
 
class  ThreeStepLinearModelFactory
 
class  ThreeStepLinearModelParameterizer
 
class  TimeFramesRegistrationHelper
 
class  TimeGeometry
 
class  TimeNavigationController
 Controls the time-related properties of the time stepper, according to the given input world time geometry. More...
 
class  TimeToPeakCurveDescriptionParameter
 
class  TNodePredicateDataType
 Tests for type compatibility (dynamic_cast). More...
 
class  Tool
 Base class of all tools used by mitk::ToolManager. More...
 
class  ToolCommand
 A command to get tool process feedback. More...
 
class  ToolManager
 Manages and coordinates instances of mitk::Tool. More...
 
class  ToolManagerProvider
 Micro Service Singleton to get an instance of mitk::ToolManager. More...
 
class  TotalSegmentatorTool
 TotalSegmentator segmentation tool. More...
 
class  TransferFunction
 The TransferFunction class A wrapper class for VTK scalar opacity, gradient opacity, and color transfer functions. More...
 
class  TransferFunctionInitializer
 Wrapper class for VTK scalar opacity, gradient opacity, and color transfer functions. More...
 
class  TransferFunctionProperty
 The TransferFunctionProperty class Property class for the mitk::TransferFunction. More...
 
class  TransferFunctionPropertySerializer
 
class  TransformationOperation
 Executes a transformation operations on one or two images. More...
 
class  TwoCompartmentExchangeModel
 Implementation of the analystical model function of the Physiological Pharmacokinetic Brix model, using an Aterial Input Function The Model calculates the Concentration-Time-Curve as a convolution of the Aterial Input funciton CA(t) and a tissue specific residue function R(t). The Residue funktion consists of two parts: The Residue funktion Qp(t) of the Blood Plasma p and the residue funktion Qi(t) of the interstitial volume I. Ctotal(t) = vp * Cp(t) + fi * Ci(t) = [vp * Qp(t) + fi * Qi(t)] conv CA(t) = Qtotal(t) conv CA(t) where vp=Vp/VT and fi=Vi/VT are the portion of Plasma/interstitial volume Vp/VI of the total volume VT respectively. The Residuefunctions are described by Qp(t) = F/Vp * PS/Vp * 1/(l2 - l1) [ µ2 exp(l1*t) - µ1 exp(l2*t)] sig(t) Qi(t) = F/Vp * PS/Vi * 1/(l1 - l2) [ exp(l1*t) - exp(l2*t)] sig(t) = F/Vp * PS/Vp * vp/fi * 1/(l1 - l2) [ exp(l1*t) - exp(l2*t)] sig(t) with l1/2 = -1/2 (PS/Vp * vp/fi + PS/Vp + F/Vp) +/- sqrt((PS/Vp * vp/fi + PS/Vp + F/Vp)² - 4* F/Vp * PS/Vp * vp/fi) µ1/2 = F/Vp * Vp/PS + 1 + Vp/PS* l1/2. More...
 
class  TwoCompartmentExchangeModelFactory
 
class  TwoCompartmentExchangeModelFactoryBase
 
class  TwoCompartmentExchangeModelParameterizer
 
class  TwoParameterToolEvent
 Tool event with 1 parameter. More...
 
class  TwoStepLinearModel
 
class  TwoStepLinearModelFactory
 
class  TwoStepLinearModelParameterizer
 
class  TwoTissueCompartmentFDGModel
 
class  TwoTissueCompartmentFDGModelFactory
 
class  TwoTissueCompartmentFDGModelParameterizer
 
class  TwoTissueCompartmentModel
 
class  TwoTissueCompartmentModelFactory
 
class  TwoTissueCompartmentModelFactoryBase
 
class  TwoTissueCompartmentModelParameterizer
 
class  UIDGenerator
 Generated unique IDs. More...
 
class  UIDManipulator
 Change the unique ID of an mitk::Identifiable. More...
 
class  UIntProperty
 
class  UndoController
 
class  UndoModel
 superclass for all UndoModels More...
 
class  UndoStackItem
 Represents an entry of the undo or redo stack. More...
 
class  UnstructuredGrid
 Class for storing unstructured grids (vtkUnstructuredGrid) More...
 
class  UnstructuredGridClusteringFilter
 This filter uses the DBSCAN algorithm for clustering an mitk::UnstructuredGrid. "MinPts" defines the number of neighbours which are required to be a kernel point if a point is in range of a kernel point but hasn't enough neighbours this point is added to the cluster but is a density reachable point and the cluster ends at this point. "eps" is the range in which the neighbours are searched. If "Meshing" is set the clusteres UnstructuredGrid is meshed and visible in 2D renderwindows. More...
 
class  UnstructuredGridMapper2D
 OpenGL-based mapper to display a 2d cut through a poly data OpenGL-based mapper to display a 2D cut through a poly data. The result is normally a line. This class can be added to any data object, which is rendered in 3D via a vtkPolyData. More...
 
class  UnstructuredGridSource
 Superclass of all classes generating unstructured grids (instances of class UnstructuredGrid) as output. More...
 
class  UnstructuredGridToUnstructuredGridFilter
 
class  UnstructuredGridVtkMapper3D
 Vtk-based mapper for UnstructuredGrid. More...
 
class  UShortProperty
 
class  ValueBasedParameterizationDelegate
 
class  Vector
 
class  Vector3DProperty
 
class  VectorImageMapper2D
 
class  VectorProperty
 Providing a std::vector as property. More...
 
struct  VectorPropertyDataType
 Helper for VectorProperty to determine a good ITK ClassName. More...
 
struct  VectorPropertyDataType< double >
 
struct  VectorPropertyDataType< int >
 
class  VectorPropertySerializer
 Serializes a VectorProperty. More...
 
class  VerboseLimitedLinearUndo
 A limited linear undo model providing GUI elements with stack status information. More...
 
class  VideoRecorder
 Record the contents of a render window as video using FFmpeg as external command-line application. More...
 
class  VideoSource
 
class  VolumeCalculator
 Calculates the volume of a mitk::Image. The given volume is in milliliters or as a voxel count. Voxels are counted if their gray value is above a threshold (see SetThreshold), the default threshold is 0. More...
 
class  VolumeMapperVtkSmart3D
 Vtk-based mapper for VolumeData. More...
 
class  VtiFileIOFactory
 Create instances of VtiFileReader objects using an object factory. More...
 
class  VtiFileReader
 Reader to read image files in vtk file format. More...
 
class  VtkAnnotation
 The VtkAnnotation class is the base for all Annotation which are using the VTK framework to render the elements. More...
 
class  VtkAnnotation2D
 The VtkAnnotation2D class is the basis for all VTK based Annotation which create a vtkActor2D element that will be drawn on the renderer. More...
 
class  VtkAnnotation3D
 The VtkAnnotation3D class is the basis for all VTK based Annotation which create any 3D element as a vtkProp that will be drawn on the renderer. More...
 
class  VtkEventAdapter
 
class  vtkEventProvider
 Integrates into the VTK event mechanism to generate MITK specific events. This class is NON-QT dependent pandon to the current MITK event handling code in QmitkRenderWindow. More...
 
class  VtkGLMapperWrapper
 Vtk-based 2D mapper for PointSet. More...
 
class  VtkImageIOFactory
 Create instances of VtkImageReader objects using an object factory. More...
 
class  VtkImageReader
 Reader to read image files in vtk file format. More...
 
class  VtkInteractorStyle
 Implements the handling of events that are missing for MITK interaction. More...
 
class  VtkInterpolationProperty
 
class  VtkLayerController
 
class  VtkLoggingAdapter
 Adapter that overwrites the standard vtk logging output window and sends the logging messages to the MITK logging instead. More...
 
class  VtkMapper
 Base class of all Vtk Mappers in order to display primitives by exploiting Vtk functionality. More...
 
class  vtkPointSetXMLParser
 Implementation of the vtkXMLParser interface for reading mitk::PointSets. More...
 
class  VtkPropRenderer
 VtkPropRenderer. More...
 
class  VtkRepresentationProperty
 
class  VtkResliceInterpolationProperty
 
class  VtkScalarModeProperty
 
class  VtkSurfaceIOFactory
 Create instances of VtkSurfaceReader objects using an object factory. More...
 
class  VtkSurfaceReader
 Reader to read surface files in vtk-format. More...
 
class  VtkWidgetRendering
 Mechanism for rendering a vtkWidget in the foreground of a RenderWindow. More...
 
class  WeakPointer
 
class  WeakPointerProperty
 Property containing a smart-pointer. More...
 
class  WeightedPointTransform
 This class implements an extension of the weighted point based registration algorithm from A. Danilchenko, R. Balachandran and J. M. Fitzpatrick. More...
 
class  WorkbenchCommandConstants
 
struct  WorkbenchUtil
 Utility class for loading data, opening editors and other tasks in a MITK Workbench. More...
 
class  XML2EventParser
 
class  XMLPreferencesStorage
 See IPreferencesStorage. More...
 
class  XnatSessionTracker
 

Typedefs

using AffineTransform3D = itk::ScalableAffineTransform< ScalarType, 3 >
 
typedef itk::BoundingBox< unsigned long, 3, ScalarTypeBoundingBox
 Standard 3D-BoundingBox typedef. More...
 
typedef itk::FixedArray< ScalarType, 2 > TimeBounds
 Standard typedef for time-bounds. More...
 
typedef itk::FixedArray< ScalarType, 3 > FixedArrayType
 
typedef BaseDataSource BaseProcess
 
typedef itk::RGBPixel< float > Color
 Color Standard RGB color typedef (float) More...
 
typedef Line< ScalarType, 3 > Line3D
 
typedef itk::VectorContainer< unsigned int, Material::PointerMaterialVectorContainer
 
typedef Matrix< ScalarType, 2, 2 > Matrix2D
 
typedef Matrix< ScalarType, 3, 3 > Matrix3D
 
typedef Matrix< ScalarType, 4, 4 > Matrix4D
 
typedef MoveBaseDataInteractor MoveSurfaceInteractor
 
typedef double ScalarType
 
typedef int OperationType
 
typedef itk::IOPixelEnum itkIOPixelType
 
typedef itk::IOComponentEnum itkIOComponentType
 
typedef PlaneGeometry Geometry2D
 
typedef PlaneGeometryData Geometry2DData
 
typedef PlaneGeometryDataToSurfaceFilter Geometry2DDataToSurfaceFilter
 
typedef PlaneGeometryDataVtkMapper3D Geometry2DDataVtkMapper3D
 
typedef Point< ScalarType, 2 > Point2D
 
typedef Point< ScalarType, 3 > Point3D
 
typedef Point< ScalarType, 4 > Point4D
 
typedef Point< int, 2 > Point2I
 
typedef Point< int, 3 > Point3I
 
typedef Point< int, 4 > Point4I
 
typedef vnl_quaternion< ScalarTypeQuaternion
 
typedef std::vector< mitk::StateMachineAction::PointerActionVectorType
 
typedef std::vector< StateMachineConditionConditionVectorType
 
typedef itk::SmartPointer< StateMachineStateSpStateMachineState
 
typedef mitk::ScalarType TimePointType
 
typedef std::size_t TimeStepType
 
typedef Vector< ScalarType, 2 > Vector2D
 
typedef Vector< ScalarType, 3 > Vector3D
 
typedef Vector< ScalarType, 4 > Vector4D
 
typedef vnl_vector< ScalarTypeVnlVector
 
typedef VectorProperty< double > DoubleVectorProperty
 
typedef VectorProperty< int > IntVectorProperty
 
typedef VtkMapper VtkMapper2D
 
typedef VtkMapper VtkMapper3D
 
typedef itk::Image< int > TestImageType
 
typedef itk::Image< unsigned char > TestMaskType
 
typedef std::vector< DICOMDatasetAccess * > DICOMDatasetList
 
typedef std::vector< DICOMDatasetAccessingImageFrameInfo::Pointer > DICOMDatasetAccessingImageFrameList
 
typedef std::vector< std::string > StringList
 
typedef std::vector< bool > BoolList
 
typedef std::vector< std::string > DICOMFilePathList
 
typedef std::vector< DICOMGDCMImageFrameInfo::Pointer > DICOMGDCMImageFrameList
 
typedef std::vector< DICOMImageFrameInfo::Pointer > DICOMImageFrameList
 
typedef TemporoSpatialStringProperty DICOMProperty
 
typedef std::vector< DICOMTagDICOMTagList
 
typedef std::vector< DICOMTagPathDICOMTagPathList
 
typedef std::map< DICOMTagPath, std::string > DICOMTagPathMapType
 
typedef itk::Statistics::ListSample< itk::Statistics::MeasurementVectorPixelTraits< ScalarType >::MeasurementVectorType > IntensityProfile
 
typedef GLMapper GLMapper2D
 
template<typename TImageType >
using FastSymmetricForcesDemonsMultiResDefaultRegistrationAlgorithm = map::algorithm::boxed::ITKFastSymmetricForcesDemonsMultiResRegistrationAlgorithm< TImageType, map::algorithm::mitkFastSymmetricForcesDemonsMultiResDefaultRegistrationAlgorithmUIDPolicy >
 
template<typename TImageType >
using LevelSetMotionMultiResDefaultRegistrationAlgorithm = map::algorithm::boxed::ITKLevelSetMotionMultiResRegistrationAlgorithm< TImageType, map::algorithm::mitkLevelSetMotionMultiResDefaultRegistrationAlgorithmUIDPolicy >
 
template<class TImageType >
using MultiModalRigidHeadNeckRegistrationAlgorithm = typename map::algorithm::boxed::MultiModalRigidHeadNeckRegistrationAlgorithm< TImageType, ::map::algorithm::mitkMultiModalRigidHeadNeckRegistrationAlgorithmUIDPolicy >
 
template<class TImageType >
using MultiModalRigidSlabbedHeadRegistrationAlgorithm = typename map::algorithm::boxed::MultiModalRigidSlabbedHeadRegistrationAlgorithm< TImageType, ::map::algorithm::mitkMultiModalRigidSlabbedHeadRegistrationAlgorithmUIDPolicy >
 
template<typename TPointSetType >
using RigidClosedFormPointsDefaultRegistrationAlgorithm = typename map::algorithm::boxed::ITKRigid3DClosedFormRegistrationAlgorithmTemplate< TPointSetType, ::map::algorithm::mitkRigidClosedFormPointsDefaultRegistrationAlgorithmUIDPolicy >::Type
 
template<typename TPointSetType >
using RigidICPDefaultRegistrationAlgorithm = map::algorithm::boxed::ITKRigid3DICPRegistrationAlgorithm< TPointSetType, TPointSetType, ::map::algorithm::mitkRigidICPDefaultRegistrationAlgorithmUIDPolicy >
 
typedef std::string NodeUIDType
 
typedef ConcreteModelParameterizerBase< mitk::LinearModelLinearModelParameterizer
 
using ParameterValueMapType = std::map< ModelTraitsInterface::ParameterNameType, double >
 
using PlotDataValues = std::vector< std::pair< double, double > >
 
using PlotDataCurveCollection = itk::MapContainer< std::string, PlotDataCurve::Pointer >
 
using LabelVector = std::vector< Label::Pointer >
 
using ConstLabelVector = std::vector< Label::ConstPointer >
 
using LabelValueMappingVector = std::vector< std::pair< Label::PixelType, Label::PixelType > >
 
using IDToLabelClassNameMapType = std::map< LabelSetImage::LabelValueType, std::string >
 
using DataStorageInspectorIDType = std::string
 
using VisibleDataStorageInspectorMapType = std::map< unsigned int, DataStorageInspectorIDType >
 
typedef double DoseValueAbs
 Represents absolute dose values (in Gy). More...
 
typedef double DoseValueRel
 Represents relative dose values (in %). More...
 
typedef ::itk::VectorContainer< unsigned int, mitk::IsoDoseLevel::Pointer > IsoDoseLevelVector
 
typedef VectorPropertySerializer< double > DoubleVectorPropertySerializer
 
typedef VectorPropertySerializer< int > IntVectorPropertySerializer
 
typedef ParameterToolEvent< int > IntegerToolEvent
 
typedef ParameterToolEvent< float > FloatToolEvent
 
typedef ParameterToolEvent< bool > BoolToolEvent
 
typedef ctkXnatSession XnatSession
 

Enumerations

enum  BorderCondition { Constant, Periodic, ZeroFluxNeumann }
 
enum  WaveletType { Held, Vow, Simoncelli, Shannon }
 
enum  GridInterpolationPositionType { SameSize, OriginAligned, CenterAligned }
 
enum  RandomImageSamplerMode { SINGLE_ACCEPTANCE_RATE, CLASS_DEPENDEND_ACCEPTANCE_RATE, SINGLE_NUMBER_OF_ACCEPTANCE, CLASS_DEPENDEND_NUMBER_OF_ACCEPTANCE }
 
enum  AnatomicalPlane { AnatomicalPlane::Axial, AnatomicalPlane::Sagittal, AnatomicalPlane::Coronal, AnatomicalPlane::Original }
 
enum  AntiAliasing : int { AntiAliasing::None, AntiAliasing::FastApproximate }
 
enum  ProcessEventMode { REGULAR, GRABINPUT, PREFERINPUT, CONNECTEDMOUSEACTION }
 
enum  EEventIds {
  EIDNULLEVENT, EIDLEFTMOUSEBTN, EIDRIGHTMOUSEBTN, EIDLEFTMOUSEBTNANDSHIFT,
  EIDMIDDLEMOUSEBTN, EIDLEFTMOUSEBTNANDCTRL, EIDMIDDLEMOUSEBTNANDCTRL, EIDRIGHTMOUSEBTNANDCTRL,
  EIDLEFTMOUSEBTNDOUBLECLICK, EIDMOUSEWHEEL, EIDLEFTMOUSERELEASE, EIDMIDDLEMOUSERELEASE,
  EIDRIGHTMOUSERELEASE, EIDLEFTMOUSERELEASEANDSHIFT, EIDMOUSEMOVE, EIDLEFTMOUSEBTNANDMOUSEWHEEL,
  EIDRIGHTMOUSEBTNANDMOUSEWHEEL, EIDMIDDLEMOUSEBTNANDMOUSEWHEEL, EIDLEFTMOUSEBTNANDMOUSEMOVE, EIDRIGHTMOUSEBTNANDMOUSEMOVE,
  EIDMIDDLEMOUSEBTNANDMOUSEMOVE, EIDCTRLANDLEFTMOUSEBTNANDMOUSEMOVE, EIDCTRLANDRIGHTMOUSEBTNANDMOUSEMOVE, EIDCTRLANDMIDDLEMOUSEBTNANDMOUSEMOVE,
  EIDCTRLANDLEFTMOUSEBTNRELEASE, EIDCTRLANDRIGHTMOUSEBTNRELEASE, EIDCTRLANDMIDDLEMOUSEBTNRELEASE, EIDSHIFTANDCTRLANDMIDDLEMOUSEBTN,
  EIDSHIFTANDLEFTMOUSEBTNANDMOUSEMOVE, EIDSHIFTANDCTRLANDMOUSEMOVE, EIDSHIFTANDCTRLANDMOUSERELEASE, EIDALTANDLEFTMOUSEBTN,
  EIDALTANDLEFTMOUSEBTNANDMOUSEMOVE, EIDALTANDLEFTMOUSERELEASE, EIDCTRLANDLEFTMOUSEWHEEL, EIDALTANDMOUSEWHEEL,
  EIDALTANDMIDDLEMOUSEBTN, EIDALTANDMIDDLEMOUSEBTNANDMOVE, EIDALTANDMIDDLEMOUSEBTNRELEASE, EIDALTANDSHIFTANDRIGHTMOUSEBTN,
  EIDALTANDSHIFTANDRIGHTMOUSEBTNANDMOUSEMOVE, EIDALTANDSHIFTANDRIGHTMOUSEBTNRELEASE, EIDSHIFTANDRIGHTMOUSEPRESS, EIDSHIFTANDRIGHTMOUSEMOVE,
  EIDSHIFTANDRIGHTMOUSERELEASE, EIDSHIFTANDMIDDLEMOUSEPRESS, EIDSHIFTANDMIDDLEMOUSEMOVE, EIDSHIFTANDMIDDLEMOUSERELEASE,
  EIDSTRGANDN, EIDSTRGANDE, EIDDELETE, EIDN,
  EIDESCAPE, EIDP, EIDR, EIDT,
  EIDS, EIDE, EIDSTRGANDALTANDA, EIDSTRGANDALTANDB,
  EIDH, EIDRETURN, EIDENTER, EIDSPACE,
  EIDPLUS, EIDMINUS, EIDSTRGANDALTANDH, EIDSTRGANDALTANDI,
  EIDSTRGANDALTANDS, EIDALT, EIDSTRGANDB, EIDNEW,
  EIDOLD, EIDFINISHED, EIDNO, EIDYES,
  EIDSAME, EIDNOANDLASTOBJECT, EIDNOANDNOTLASTOBJECT, EIDLAST,
  EIDNOTLAST, EIDSTSMALERNMINUS1, EIDSTLARGERNMINUS1, EIDPOSITIONEVENT,
  EIDEDIT, EIDSMALLERN, EIDEQUALSN, EIDLARGERN,
  EIDEMPTY, EIDSUBDESELECT, EIDSMTOSELECTED, EIDSMTODESELECTED,
  EIDTIP, EIDHEAD, EIDBODY, EIDCLEAR,
  EIDACTIVATETOOL, EIDPRINT, EV_INIT, EV_PREVIOUS,
  EV_PATH_COLLECTION_SELECTED, EV_NAVIGATION_SELECTED, EV_LESS_THEN_MIN_COUNT, EV_READY,
  EV_NEXT, EV_DONE, EV_NEW_LANDMARK, EV_REMOVE_LANDMARK,
  EIDINSIDE, EIDA, EIDB, EIDC,
  EIDD, EIDF, EIDG, EIDI,
  EIDJ, EIDK, EIDL, EIDM,
  EIDO, EIDQ, EIDU, EIDV,
  EIDW, EIDX, EIDY, EIDZ,
  EID1, EID2, EID3, EID4,
  EID5, EID6, EID7, EID8,
  EID9, EID0, EIDFIGUREHOVER, EIDNOFIGUREHOVER
}
 
enum  EOperations {
  OpNOTHING, OpTEST, OpNEWCELL, OpADD,
  OpUNDOADD, OpADDLINE, OpINSERT, OpINSERTLINE,
  OpINSERTPOINT, OpCLOSECELL, OpOPENCELL, OpMOVE,
  OpMOVELINE, OpMOVECELL, OpUNDOMOVE, OpMOVEPOINTUP,
  OpMOVEPOINTDOWN, OpREMOVE, OpREMOVELINE, OpREMOVECELL,
  OpREMOVEPOINT, OpDELETE, OpDELETELINE, OpUNDELETE,
  OpDELETECELL, OpSTATECHANGE, OpTIMECHANGE, OpTERMINATE,
  OpSELECTPOINT, OpSELECTLINE, OpSELECTCELL, OpSELECTSUBOBJECT,
  OpSELECT, OpDESELECTPOINT, OpDESELECTLINE, OpDESELECTCELL,
  OpDESELECTSUBOBJECT, OpDESELECTALL, OpDESELECT, OpNAVIGATE,
  OpZOOM, OpSCALE, OpROTATE, OpORIENT,
  OpRESTOREPLANEPOSITION, OpAPPLYTRANSFORMMATRIX, OpSETPOINTTYPE, OpMODECHANGE,
  OpSENDCOORDINATES, OpPERIPHERYSEARCH, OpROOTSEARCH, OpTHICKSTVESSELSEARCH,
  OpSHORTESTPATHSEARCH, OpATTRIBUTATION, OpDEFAULT, OpSURFACECHANGED
}
 
enum  EActions {
  AcDONOTHING, AcINITNEWOBJECT, AcINITEDITOBJECT, AcINITEDITGROUP,
  AcINITMOVEMENT, AcINITMOVE, AcINITFOREGROUND, AcINITBACKGROUND,
  AcINITNEUTRAL, AcINITUPDATE, AcADDPOINT, AcADDPOINTRMB,
  AcADD, AcADDLINE, AcADDANDFINISH, AcADDSELECTEDTOGROUP,
  AcCHECKPOINT, AcCHECKLINE, AcCHECKCELL, AcCHECKELEMENT,
  AcCHECKOBJECT, AcCHECKNMINUS1, AcCHECKEQUALS1, AcCHECKNUMBEROFPOINTS,
  AcCHECKSELECTED, AcCHECKONESELECTED, AcCHECKHOVERING, AcCHECKGREATERZERO,
  AcCHECKGREATERTWO, AcCHECKOPERATION, AcCHECKONESUBINTERACTOR, AcCHECKSUBINTERACTORS,
  AcFINISHOBJECT, AcFINISHGROUP, AcFINISHMOVEMENT, AcFINISHMOVE,
  AcFINISH, AcSEARCHOBJECT, AcSEARCHGROUP, AcSEARCHANOTHEROBJECT,
  AcSELECTPICKEDOBJECT, AcSELECTANOTHEROBJECT, AcSELECTGROUP, AcSELECTALL,
  AcSELECT, AcSELECTPOINT, AcSELECTLINE, AcSELECTCELL,
  AcSELECTSUBOBJECT, AcDESELECTOBJECT, AcDESELECTALL, AcDESELECT,
  AcDESELECTPOINT, AcDESELECTLINE, AcDESELECTCELL, AcNEWPOINT,
  AcNEWSUBOBJECT, AcMOVEPOINT, AcMOVESELECTED, AcMOVE,
  AcMOVEPOINTUP, AcMOVEPOINTDOWN, AcREMOVEPOINT, AcREMOVE,
  AcREMOVELINE, AcREMOVEALL, AcREMOVESELECTEDSUBOBJECT, AcWHEEL,
  AcPLUS, AcMINUS, AcDELETEPOINT, AcCLEAR,
  AcINSERTPOINT, AcINSERTLINE, AC_SET_NEXT_BUTTON_VISIBLE, AC_SET_NEXT_BUTTON_INVISIBLE,
  AC_SET_PREVIOUS_BUTTON_VISIBLE, AC_SET_PREVIOUS_BUTTON_INVISIBLE, AC_SET_ASSISTAND_WIDGET_STECK, AC_SETMAX_COUNT_REF_POINTS,
  AC_SET_NEXT_BUTTON_TEXT, AC_CHECK_LANDMARK_COUNT, AC_SET_DONE_FALSE, AC_INIT,
  AC_SET_APPLICATION_SELECTED_FALSE, AC_SENSOR_ATTACHED, AC_CLOSE_ASSISTENT, AC_START_APPLICATION_TEXT,
  AC_START_NAVIGATION, AC_START_PATHCOLLECTION, AC_LOAD_LANDMARKS, AC_CALCULATE_LANDMARK_TRANSFORM,
  AcTERMINATE_INTERACTION, AcTRANSLATESTART, AcTRANSLATE, AcSCALESTART,
  AcSCALE, AcROTATESTART, AcROTATE, AcINITAFFINEINTERACTIONS,
  AcFINISHAFFINEINTERACTIONS, AcTRANSLATEEND, AcSCALEEND, AcROTATEEND,
  AcINITZOOM, AcZOOM, AcSCROLL, AcLEVELWINDOW,
  AcSCROLLMOUSEWHEEL, AcSETSTARTPOINT, AcMODEDESELECT, AcMODESELECT,
  AcMODESUBSELECT, AcINFORMLISTENERS, AcASKINTERACTORS, AcCHECKGREATERONE,
  AcCHECKBOUNDINGBOX, AcFORCESUBINTERACTORS, AcSENDCOORDINATES, AcTRANSMITEVENT,
  AcPERIPHERYSEARCH, AcROOTSEARCH, AcTHICKSTVESSELSEARCH, AcSHORTESTPATHSEARCH,
  AcSINGLE, AcATTRIBUTATION, AcDEFAULT, AcSETVESSELELEMENT,
  AcCHECKBARRIERSTATUS, AcUPDATEMESH, AcINCREASE, AcDECREASE,
  AcMODIFY, AcUNDOUPDATE, AcENTEROBJECT, AcLEAVEOBJECT,
  AcSWITCHOBJECT, AcUPDATELINE, AcINITLINE, AcTERMINATELINE,
  AcCREATEBOX, AcCREATEOBJECTFROMLINE, AcCANCEL, AcACTIVATETOOL,
  AcROTATEAROUNDPOINT1, AcROTATEAROUNDPOINT2, AcMOVEPOINT1, AcMOVEPOINT2,
  AcUPDATEPOINT, AcUPDATERADIUSMOUSEWHEEL, AcDISPLAYOPTIONS, AcCYCLE,
  AcACCEPT, AcCHECKPOSITION, AcINITIALIZECONTOUR, AcCALCULATENEWSEGMENTATION_SP,
  AcINTERACTOR, AcCALCULATENEWSEGMENTATION_BB
}
 
enum  EEventType {
  Type_None, Type_Timer, Type_MouseButtonPress, Type_MouseButtonRelease,
  Type_MouseButtonDblClick, Type_MouseMove, Type_KeyPress, Type_KeyRelease,
  Type_FocusIn, Type_FocusOut, Type_Enter, Type_Leave,
  Type_Paint, Type_Move, Type_Resize, Type_Create,
  Type_Destroy, Type_Show, Type_Hide, Type_Close,
  Type_Quit, Type_Reparent, Type_ShowMinimized, Type_ShowNormal,
  Type_WindowActivate, Type_WindowDeactivate, Type_ShowToParent, Type_HideToParent,
  Type_ShowMaximized, Type_ShowFullScreen, Type_Accel, Type_Wheel,
  Type_AccelAvailable, Type_CaptionChange, Type_IconChange, Type_ParentFontChange,
  Type_ApplicationFontChange, Type_ParentPaletteChange, Type_ApplicationPaletteChange, Type_PaletteChange,
  Type_Clipboard, Type_Speech, Type_SockAct, Type_AccelOverride,
  Type_DeferredDelete, Type_DragEnter, Type_DragMove, Type_DragLeave,
  Type_Drop, Type_DragResponse, Type_ChildInserted, Type_ChildRemoved,
  Type_LayoutHint, Type_ShowWindowRequest, Type_ActivateControl, Type_DeactivateControl,
  Type_ContextMenu, Type_IMStart, Type_IMCompose, Type_IMEnd,
  Type_Accessibility, Type_TabletMove, Type_LocaleChange, Type_LanguageChange,
  Type_LayoutDirectionChange, Type_Style, Type_TabletPress, Type_TabletRelease,
  Type_User, Type_MaxUser
}
 
enum  EButtonStates {
  BS_NoButton, BS_LeftButton, BS_RightButton, BS_MidButton,
  BS_MouseButtonMask, BS_ShiftButton, BS_ControlButton, BS_AltButton,
  BS_MetaButton, BS_KeyButtonMask, BS_Keypad
}
 
enum  EKeys {
  Key_Escape, Key_Tab, Key_Backtab, Key_BackTab,
  Key_Backspace, Key_BackSpace, Key_Return, Key_Enter,
  Key_Insert, Key_Delete, Key_Pause, Key_Print,
  Key_SysReq, Key_Home, Key_End, Key_Left,
  Key_Up, Key_Right, Key_Down, Key_Prior,
  Key_PageUp, Key_Next, Key_PageDown, Key_Shift,
  Key_Control, Key_Meta, Key_Alt, Key_CapsLock,
  Key_NumLock, Key_ScrollLock, Key_F1, Key_F2,
  Key_F3, Key_F4, Key_F5, Key_F6,
  Key_F7, Key_F8, Key_F9, Key_F10,
  Key_F11, Key_F12, Key_F13, Key_F14,
  Key_F15, Key_F16, Key_F17, Key_F18,
  Key_F19, Key_F20, Key_F21, Key_F22,
  Key_F23, Key_F24, Key_F25, Key_F26,
  Key_F27, Key_F28, Key_F29, Key_F30,
  Key_F31, Key_F32, Key_F33, Key_F34,
  Key_F35, Key_Super_L, Key_Super_R, Key_Menu,
  Key_Hyper_L, Key_Hyper_R, Key_Help, Key_Muhenkan,
  Key_Henkan, Key_Hiragana_Katakana, Key_Zenkaku_Hankaku, Key_Space,
  Key_Any, Key_Exclam, Key_QuoteDbl, Key_NumberSign,
  Key_Dollar, Key_Percent, Key_Ampersand, Key_Apostrophe,
  Key_ParenLeft, Key_ParenRight, Key_Asterisk, Key_Plus,
  Key_Comma, Key_Minus, Key_Period, Key_Slash,
  Key_0, Key_1, Key_2, Key_3,
  Key_4, Key_5, Key_6, Key_7,
  Key_8, Key_9, Key_Colon, Key_Semicolon,
  Key_Less, Key_Equal, Key_Greater, Key_Question,
  Key_At, Key_A, Key_B, Key_C,
  Key_D, Key_E, Key_F, Key_G,
  Key_H, Key_I, Key_J, Key_K,
  Key_L, Key_M, Key_N, Key_O,
  Key_P, Key_Q, Key_R, Key_S,
  Key_T, Key_U, Key_V, Key_W,
  Key_X, Key_Y, Key_Z, Key_BracketLeft,
  Key_Backslash, Key_BracketRight, Key_AsciiCircum, Key_Underscore,
  Key_QuoteLeft, Key_BraceLeft, Key_Bar, Key_BraceRight,
  Key_AsciiTilde, Key_nobreakspace, Key_exclamdown, Key_cent,
  Key_sterling, Key_currency, Key_yen, Key_brokenbar,
  Key_section, Key_diaeresis, Key_copyright, Key_ordfeminine,
  Key_guillemotleft, Key_notsign, Key_hyphen, Key_registered,
  Key_macron, Key_degree, Key_plusminus, Key_twosuperior,
  Key_threesuperior, Key_acute, Key_mu, Key_paragraph,
  Key_periodcentered, Key_cedilla, Key_onesuperior, Key_masculine,
  Key_guillemotright, Key_onequarter, Key_onehalf, Key_threequarters,
  Key_questiondown, Key_Agrave, Key_Aacute, Key_Acircumflex,
  Key_Atilde, Key_Adiaeresis, Key_Aring, Key_AE,
  Key_Ccedilla, Key_Egrave, Key_Eacute, Key_Ecircumflex,
  Key_Ediaeresis, Key_Igrave, Key_Iacute, Key_Icircumflex,
  Key_Idiaeresis, Key_ETH, Key_Ntilde, Key_Ograve,
  Key_Oacute, Key_Ocircumflex, Key_Otilde, Key_Odiaeresis,
  Key_multiply, Key_Ooblique, Key_Ugrave, Key_Uacute,
  Key_Ucircumflex, Key_Udiaeresis, Key_Yacute, Key_THORN,
  Key_ssharp, Key_agrave, Key_aacute, Key_acircumflex,
  Key_atilde, Key_adiaeresis, Key_aring, Key_ae,
  Key_ccedilla, Key_egrave, Key_eacute, Key_ecircumflex,
  Key_ediaeresis, Key_igrave, Key_iacute, Key_icircumflex,
  Key_idiaeresis, Key_eth, Key_ntilde, Key_ograve,
  Key_oacute, Key_ocircumflex, Key_otilde, Key_odiaeresis,
  Key_division, Key_oslash, Key_ugrave, Key_uacute,
  Key_ucircumflex, Key_udiaeresis, Key_yacute, Key_thorn,
  Key_ydiaeresis, Key_unknown, Key_none
}
 
enum  PointSpecificationType {
  PTUNDEFINED, PTSTART, PTCORNER, PTEDGE,
  PTEND
}
 enumeration of the type a point can be More...
 
enum  PixelSpacingInterpretation { SpacingInPatient, SpacingAtDetector, SpacingUnknown }
 How the mitk::Image spacing should be interpreted (see mitk::DICOMFileReader). More...
 
enum  ReaderImplementationLevel {
  SOPClassSupported, SOPClassPartlySupported, SOPClassImplemented, SOPClassUnsupported,
  SOPClassUnknown
}
 Describes how well the reader is tested for a certain file type (see mitk::DICOMFileReader). More...
 
enum  LogLevel {
  LogLevel::Info, LogLevel::Warn, LogLevel::Error, LogLevel::Fatal,
  LogLevel::Debug
}
 Message/event levels of the MITK log mechanism. More...
 
enum  { PropertyRole }
 

Functions

MITKNEWMODULE_EXPORT bool Equal (mitk::ExampleDataStructure *leftHandSide, mitk::ExampleDataStructure *rightHandSide, mitk::ScalarType eps, bool verbose)
 Returns true if the example data structures are considered equal. More...
 
 itkEventMacroDeclaration (BoundingShapeInteractionEvent, itk::AnyEvent)
 
MITKBOUNDINGSHAPE_EXPORT void RegisterBoundingShapeObjectFactory ()
 
std::vector< mitk::Point3DGetCornerPoints (mitk::BaseGeometry::Pointer geometry, bool visualizationOffset)
 helper function for calculating corner points of the bounding object from a given geometry More...
 
mitk::Point3D CalcAvgPoint (mitk::Point3D a, mitk::Point3D b)
 helper function for calculating the average of two points More...
 
std::vector< int > GetHandleIndices (int index)
 
DICOMTagPath DICOM_IMAGING_FREQUENCY_PATH ()
 
MITKCEST_EXPORT bool IsAnyCESTImage (const Image *cestImage)
 
MITKCEST_EXPORT bool IsCESTorWasabiImage (const Image *cestImage)
 
MITKCEST_EXPORT bool IsCESTT1Image (const Image *cestImage)
 
MITKCEST_EXPORT NodePredicateBase::Pointer CreateAnyCESTImageNodePredicate ()
 
MITKCEST_EXPORT NodePredicateBase::Pointer CreateCESTorWasabiImageNodePredicate ()
 
MITKCEST_EXPORT NodePredicateBase::Pointer CreateCESTT1ImageNodePredicate ()
 
MITKCEST_EXPORT bool IsNotNormalizedCESTImage (const Image *cestImage)
 
const std::string MITKCEST_EXPORT CEST_PROPERTY_NAME_PREPERATIONTYPE ()
 
const std::string MITKCEST_EXPORT CEST_PROPERTY_NAME_RECOVERYMODE ()
 
const std::string MITKCEST_EXPORT CEST_PROPERTY_NAME_SPOILINGTYPE ()
 
const std::string MITKCEST_EXPORT CEST_PROPERTY_NAME_OFFSETS ()
 
const std::string MITKCEST_EXPORT CEST_PROPERTY_NAME_TREC ()
 
const std::string MITKCEST_EXPORT CEST_PROPERTY_NAME_FREQ ()
 
const std::string MITKCEST_EXPORT CEST_PROPERTY_NAME_PULSEDURATION ()
 
const std::string MITKCEST_EXPORT CEST_PROPERTY_NAME_B1Amplitude ()
 
const std::string MITKCEST_EXPORT CEST_PROPERTY_NAME_DutyCycle ()
 
double MITKCEST_EXPORT GetCESTB1Amplitude (const IPropertyProvider *provider)
 
double MITKCEST_EXPORT GetCESTFrequency (const IPropertyProvider *provider)
 
void MITKCEST_EXPORT SetCESTFrequencyMHz (IPropertyOwner *owner, double freqInMHz)
 
double MITKCEST_EXPORT GetCESTPulseDuration (const IPropertyProvider *provider)
 
double MITKCEST_EXPORT GetCESTDutyCycle (const IPropertyProvider *provider)
 
MITKCEST_EXPORT std::vector< ScalarTypeExtractCESTOffset (const BaseData *image)
 
MITKCEST_EXPORT std::vector< ScalarTypeExtractCESTT1Time (const BaseData *image)
 
MITKCLCORE_EXPORT FeatureID CreateFeatureID (FeatureID templateID, std::string name)
 
 itkEventMacroDeclaration (ContourModelEvent, itk::AnyEvent)
 
 itkEventMacroDeclaration (ContourModelShiftEvent, ContourModelEvent)
 
 itkEventMacroDeclaration (ContourModelSizeChangeEvent, ContourModelEvent)
 
 itkEventMacroDeclaration (ContourModelAddEvent, ContourModelSizeChangeEvent)
 
 itkEventMacroDeclaration (ContourModelRemoveEvent, ContourModelSizeChangeEvent)
 
 itkEventMacroDeclaration (ContourModelExpandTimeBoundsEvent, ContourModelEvent)
 
 itkEventMacroDeclaration (ContourModelClosedEvent, ContourModelEvent)
 
MITKCORE_EXPORT void ToJSON (nlohmann::json &j, AffineTransform3D::ConstPointer transform)
 Write transform (4x4 matrix) as JSON array with 16 elements. More...
 
MITKCORE_EXPORT void FromJSON (const nlohmann::json &j, AffineTransform3D::Pointer transform)
 Read transform from JSON array (16 elements, resp. 4x4 matrix). More...
 
template<typename ArrayType , typename TCoordRep , unsigned int NVectorDimension>
void FillArray (itk::FixedArray< TCoordRep, NVectorDimension > &toArray, const ArrayType &array)
 Copies elements of an array to this Vector. More...
 
template<typename ArrayType , typename TCoordRep , unsigned int NVectorDimension>
itk::FixedArray< TCoordRep, NVectorDimension > FillArray (const ArrayType &array)
 Copies elements of an array to this Vector. More...
 
template<typename ArrayType , typename TCoordRep , unsigned int NVectorDimension>
void ToArray (ArrayType &array, const itk::FixedArray< TCoordRep, NVectorDimension > &vectorOrPoint)
 Copies the elements of this into an array. More...
 
template<typename ArrayType , typename TCoordRep , unsigned int NVectorDimension>
ArrayType ToArray (const itk::FixedArray< TCoordRep, NVectorDimension > &vectorOrPoint)
 Copies the elements of this into an array. More...
 
template<class Tout >
void FillVector3D (Tout &out, mitk::ScalarType x, mitk::ScalarType y, mitk::ScalarType z)
 
template<class Tout >
void FillVector4D (Tout &out, mitk::ScalarType x, mitk::ScalarType y, mitk::ScalarType z, mitk::ScalarType t)
 
template<typename TArrayType1 , typename TArrayType2 >
bool EqualArray (TArrayType1 &arrayType1, TArrayType2 &arrayType2, int size, ScalarType eps=mitk::eps, bool verbose=false)
 
MITKCORE_EXPORT bool Equal (const mitk::BaseGeometry &leftHandSide, const mitk::BaseGeometry &rightHandSide, ScalarType coordinateEps, ScalarType directionEps, bool verbose=false)
 Equal A function comparing two geometries for being identical. More...
 
MITKCORE_EXPORT bool Equal (const mitk::BaseGeometry &leftHandSide, const mitk::BaseGeometry &rightHandSide, ScalarType eps=mitk::eps, bool verbose=false)
 Equal A function comparing two geometries for being identical. More...
 
MITKCORE_EXPORT bool Equal (const mitk::BaseGeometry::TransformType &leftHandSide, const mitk::BaseGeometry::TransformType &rightHandSide, ScalarType eps, bool verbose)
 Equal A function comparing two transforms (TransformType) for being identical. More...
 
MITKCORE_EXPORT bool Equal (const mitk::BaseGeometry::BoundingBoxType &leftHandSide, const mitk::BaseGeometry::BoundingBoxType &rightHandSide, ScalarType eps, bool verbose)
 Equal A function comparing two bounding boxes (BoundingBoxType) for being identical. More...
 
MITKCORE_EXPORT bool IsSubGeometry (const mitk::BaseGeometry &testGeo, const mitk::BaseGeometry &referenceGeo, ScalarType coordinateEps, ScalarType directionEps, bool verbose=false)
 A function checks if a test geometry is a sub geometry of a given reference geometry. More...
 
MITKCORE_EXPORT bool IsSubGeometry (const mitk::BaseGeometry &testGeo, const mitk::BaseGeometry &referenceGeo, ScalarType eps=mitk::eps, bool verbose=false)
 A function checks if a test geometry is a sub geometry of a given reference geometry. More...
 
 itkEventMacroDeclaration (RendererResetEvent, itk::AnyEvent)
 
std::string MITKCORE_EXPORT ConvertCompositePixelValueToString (Image::Pointer image, itk::Index< 3 > index)
 Converts composite pixel values to a displayable string. More...
 
void swap (CustomMimeType &l, CustomMimeType &r)
 
 itkEventMacroDeclaration (DataInteractorEvent, itk::AnyEvent)
 
 itkEventMacroDeclaration (StartInteraction, DataInteractorEvent)
 
 itkEventMacroDeclaration (ResultReady, DataInteractorEvent)
 
 itkEventMacroDeclaration (InteractorChangedEvent, itk::AnyEvent)
 Definition of an itk::Event that is invoked when a DataInteractor is set on this DataNode. More...
 
MITKCORE_EXPORT std::istream & operator>> (std::istream &i, DataNode::Pointer &dtn)
 
MITKCORE_EXPORT std::ostream & operator<< (std::ostream &o, DataNode::Pointer &dtn)
 
MITKCORE_EXPORT DataNode::Pointer FindTopmostVisibleNode (const DataStorage::SetOfObjects::ConstPointer nodes, const Point3D worldPosition, const TimePointType timePoint, const BaseRenderer *baseRender)
 returns the topmost visible node of a given list of nodes. The function returns a node that is visible and has the highest layer of a set of given nodes. The property list, which is used to find the visibility- and layer-property is specified by the given base renderer. More...
 
template<typename DifferenceType >
bool DifferenceBiggerOrEqualEps (DifferenceType diff, mitk::ScalarType epsilon=mitk::eps)
 
template<typename ElementToOutput1 , typename ElementToOutput2 >
void ConditionalOutputOfDifference (ElementToOutput1 elem1, ElementToOutput2 elem2, mitk::ScalarType eps, bool verbose, bool isEqual)
 
bool Equal (ScalarType scalar1, ScalarType scalar2, ScalarType eps=mitk::eps, bool verbose=false)
 
MITKCORE_EXPORT std::ostream & operator<< (std::ostream &os, const mitk::Exception &e)
 
void swap (FileReaderSelector &fws1, FileReaderSelector &fws2)
 
void swap (FileWriterSelector &fws1, FileWriterSelector &fws2)
 
template<typename T >
void from_json (const nlohmann::json &, GenericLookupTable< T > &)
 
template<typename T >
void to_json (nlohmann::json &j, const GenericLookupTable< T > &t)
 
MITKCORE_EXPORT bool Equal (const mitk::GeometryData &leftHandSide, const mitk::GeometryData &rightHandSide, mitk::ScalarType eps, bool verbose)
 Equal Compare two GeometryData objects for equality, returns true if found equal. More...
 
MITKCORE_EXPORT bool Equal (const mitk::GeometryTransformHolder &leftHandSide, const mitk::GeometryTransformHolder &rightHandSide, ScalarType eps, bool verbose)
 
MITKCORE_EXPORT bool Equal (const mitk::GeometryTransformHolder *leftHandSide, const mitk::GeometryTransformHolder *rightHandSide, ScalarType eps, bool verbose)
 
template<typename T >
std::vector< std::string > GetClassHierarchy ()
 
template<>
std::vector< std::string > GetClassHierarchy< void > ()
 
MITKCORE_EXPORT bool Equal (const mitk::Image &leftHandSide, const mitk::Image &rightHandSide, ScalarType eps, bool verbose)
 Equal A function comparing two images for being equal in meta- and imagedata. More...
 
template<typename TPixel , unsigned int VImageDimension, class ItkOutputImageType >
void _CastToItkImage2Access (const itk::Image< TPixel, VImageDimension > *itkInputImage, itk::SmartPointer< ItkOutputImageType > &itkOutputImage)
 
template<typename TPixel , unsigned int VImageDimension, class ItkOutputImageType >
void _CastToItkImage2Access (const itk::VectorImage< TPixel, VImageDimension > *itkInputImage, itk::SmartPointer< ItkOutputImageType > &itkOutputImage)
 
template<typename ItkOutputImageType >
void MITKCORE_EXPORT CastToItkImage (const mitk::Image *mitkImage, itk::SmartPointer< ItkOutputImageType > &itkOutputImage)
 Cast an mitk::Image to an itk::Image with a specific type. More...
 
template<typename TPixelType , unsigned int VImageDimension>
void MITKCORE_EXPORT CastToItkImage (const mitk::Image *mitkImage, itk::SmartPointer< itk::VectorImage< TPixelType, VImageDimension >> &itkOutputImage)
 Cast an mitk::Image to an itk::VectorImage with a specific type. More...
 
template<typename ItkOutputImageType >
void CastToMitkImage (const itk::SmartPointer< ItkOutputImageType > &itkimage, itk::SmartPointer< mitk::Image > &mitkoutputimage)
 Cast an itk::Image (with a specific type) to an mitk::Image. More...
 
template<typename ItkOutputImageType >
void CastToMitkImage (const ItkOutputImageType *itkimage, itk::SmartPointer< mitk::Image > &mitkoutputimage)
 Cast an itk::Image (with a specific type) to an mitk::Image. More...
 
template<class TPixel >
mitk::ScalarType FastSinglePixelAccess (mitk::PixelType, mitk::Image::Pointer im, ImageDataItem *item, itk::Index< 3 > idx, mitk::ScalarType &val, int component=0)
 
template<class TPixel >
mitk::ScalarType FastSinglePixelAccess (mitk::PixelType, mitk::Image::ConstPointer im, const ImageDataItem *item, itk::Index< 3 > idx, mitk::ScalarType &val, int component=0)
 
MITKCORE_EXPORT Image::ConstPointer SelectImageByTimeStep (const Image *image, unsigned int timestep)
 
MITKCORE_EXPORT Image::Pointer SelectImageByTimeStep (Image *image, unsigned int timestep)
 
MITKCORE_EXPORT Image::ConstPointer SelectImageByTimePoint (const Image *image, TimePointType timePoint)
 
MITKCORE_EXPORT Image::Pointer SelectImageByTimePoint (Image *image, TimePointType timePoint)
 
template<typename TPixel , unsigned int VDimension>
ImageTypeTrait< TPixel, VDimension >::ImageType::Pointer ImageToItkImage (mitk::Image *mitkImage)
 Convert a MITK image to an ITK image. More...
 
template<typename TPixel , unsigned int VDimension>
ImageTypeTrait< TPixel, VDimension >::ImageType::ConstPointer ImageToItkImage (const mitk::Image *mitkImage)
 Convert a MITK image to an ITK image. More...
 
MITKCORE_EXPORT bool operator== (const InteractionEvent &a, const InteractionEvent &b)
 
MITKCORE_EXPORT bool operator!= (const InteractionEvent &a, const InteractionEvent &b)
 
InteractionEvent::MouseButtons operator| (InteractionEvent::MouseButtons a, InteractionEvent::MouseButtons b)
 
InteractionEvent::MouseButtonsoperator|= (InteractionEvent::MouseButtons &a, InteractionEvent::MouseButtons &b)
 
InteractionEvent::ModifierKeys operator| (InteractionEvent::ModifierKeys a, InteractionEvent::ModifierKeys b)
 
InteractionEvent::ModifierKeysoperator|= (InteractionEvent::ModifierKeys &a, InteractionEvent::ModifierKeys &b)
 
 itkEventMacroDeclaration (InteractionSchemeChangedEvent, itk::AnyEvent)
 Can be observed by GUI class to update button states when type is changed programmatically. More...
 
template<typename BasicJsonType >
void to_json (BasicJsonType &j, const IOVolumeSplitReason::ReasonType &e)
 
template<typename BasicJsonType >
void from_json (const BasicJsonType &j, IOVolumeSplitReason::ReasonType &e)
 
MITKCORE_EXPORT void to_json (nlohmann::json &j, IOVolumeSplitReason::ConstPointer reason)
 
MITKCORE_EXPORT void to_json (nlohmann::json &j, IOVolumeSplitReason::Pointer reason)
 
MITKCORE_EXPORT void from_json (const nlohmann::json &j, IOVolumeSplitReason &reason)
 
template<typename ItkOutputImageType >
Image::Pointer ImportItkImage (const itk::SmartPointer< ItkOutputImageType > &itkimage, const BaseGeometry *geometry=nullptr, bool update=true)
 Imports an itk::Image (with a specific type) as an mitk::Image. More...
 
template<typename ItkOutputImageType >
Image::Pointer ImportItkImage (const ItkOutputImageType *itkimage, const BaseGeometry *geometry=nullptr, bool update=true)
 Imports an itk::Image (with a specific type) as an mitk::Image. More...
 
template<typename ItkOutputImageType >
Image::Pointer GrabItkImageMemory (itk::SmartPointer< ItkOutputImageType > &itkimage, mitk::Image *mitkImage=nullptr, const BaseGeometry *geometry=nullptr, bool update=true)
 Grabs the memory of an itk::Image (with a specific type) and puts it into an mitk::Image. More...
 
template<typename ItkOutputImageType >
Image::Pointer GrabItkImageMemory (ItkOutputImageType *itkimage, mitk::Image *mitkImage=nullptr, const BaseGeometry *geometry=nullptr, bool update=true)
 Grabs the memory of an itk::Image (with a specific type) and puts it into an mitk::Image. More...
 
template<typename ItkOutputImageType >
Image::Pointer GrabItkImageMemoryChannel (ItkOutputImageType *itkimage, const TimeGeometry *geometry=nullptr, mitk::Image *mitkImage=nullptr, bool update=true)
 Grabs the memory of an itk::Image (with a specific type) and puts it into an mitk::Image. More...
 
MITKCORE_EXPORT std::vector< TimePointTypeConvertMetaDataObjectToTimePointList (const itk::MetaDataObjectBase *data)
 
MITKCORE_EXPORT itk::MetaDataObjectBase::Pointer ConvertTimePointListToMetaDataObject (const mitk::TimeGeometry *timeGeometry)
 
MITKCORE_EXPORT void to_json (nlohmann::json &j, const LevelWindow &lw)
 
MITKCORE_EXPORT void from_json (const nlohmann::json &j, LevelWindow &lw)
 
template<typename Target >
Target lexical_cast (const std::string &arg)
 
 itkEventMacroDeclaration (UndoStackEvent, itk::ModifiedEvent)
 
 itkEventMacroDeclaration (UndoEmptyEvent, UndoStackEvent)
 
 itkEventMacroDeclaration (RedoEmptyEvent, UndoStackEvent)
 
 itkEventMacroDeclaration (UndoNotEmptyEvent, UndoStackEvent)
 
 itkEventMacroDeclaration (RedoNotEmptyEvent, UndoStackEvent)
 
 itkEventMacroDeclaration (UndoFullEvent, UndoStackEvent)
 Additional unused events, if anybody wants to put an artificial limit to the possible number of items in the stack. More...
 
 itkEventMacroDeclaration (RedoFullEvent, UndoStackEvent)
 
MITKCORE_EXPORT std::ostream & operator<< (std::ostream &stream, const BoolLookupTable &)
 
MITKCORE_EXPORT std::ostream & operator<< (std::ostream &stream, const FloatLookupTable &)
 
MITKCORE_EXPORT std::ostream & operator<< (std::ostream &stream, const IntLookupTable &)
 
MITKCORE_EXPORT std::ostream & operator<< (std::ostream &stream, const StringLookupTable &)
 
template<typename TCoordRep , unsigned int NRows, unsigned int NCols>
bool MatrixEqualRMS (const vnl_matrix_fixed< TCoordRep, NRows, NCols > &matrix1, const vnl_matrix_fixed< TCoordRep, NRows, NCols > &matrix2, mitk::ScalarType epsilon=mitk::eps)
 Check for matrix equality with a user defined accuracy. As an equality metric the root mean squared error (RMS) of all elements is calculated. More...
 
template<typename TCoordRep , unsigned int NRows, unsigned int NCols>
bool MatrixEqualRMS (const itk::Matrix< TCoordRep, NRows, NCols > &matrix1, const itk::Matrix< TCoordRep, NRows, NCols > &matrix2, mitk::ScalarType epsilon=mitk::eps)
 Check for matrix equality with a user defined accuracy. As an equality metric the root mean squared error (RMS) of all elements is calculated. More...
 
template<typename TCoordRep , unsigned int NRows, unsigned int NCols>
bool MatrixEqualElementWise (const vnl_matrix_fixed< TCoordRep, NRows, NCols > &matrix1, const vnl_matrix_fixed< TCoordRep, NRows, NCols > &matrix2, mitk::ScalarType epsilon=mitk::eps)
 Check for element-wise matrix equality with a user defined accuracy. More...
 
template<typename TCoordRep , unsigned int NRows, unsigned int NCols>
bool MatrixEqualElementWise (const itk::Matrix< TCoordRep, NRows, NCols > &matrix1, const itk::Matrix< TCoordRep, NRows, NCols > &matrix2, mitk::ScalarType epsilon=mitk::eps)
 Check for element-wise matrix equality with a user defined accuracy. More...
 
template<class TTransformType >
void TransferVtkMatrixToItkTransform (const vtkMatrix4x4 *vtkmatrix, TTransformType *itkTransform)
 
template<class TTransformType >
void TransferItkTransformToVtkMatrix (const TTransformType *itkTransform, vtkMatrix4x4 *vtkmatrix)
 
template<class TTransformType1 , class TTransformType2 >
void ConvertItkTransform (const TTransformType1 *sourceTransform, TTransformType2 *destTransform)
 
template<class TMatrixType >
void GetRotation (const mitk::BaseGeometry *geometry, TMatrixType &itkmatrix)
 
template<class TTransformType >
void GetWorldToItkPhysicalTransform (const mitk::BaseGeometry *geometry, TTransformType *itkTransform)
 
MITKCORE_EXPORT void swap (MimeType &m1, MimeType &m2)
 
MITKCORE_EXPORT std::ostream & operator<< (std::ostream &os, const MimeType &mimeType)
 
template<typename T >
std::string PixelComponentTypeToString ()
 
template<typename PixelT >
std::string PixelTypeToString ()
 
MITKCORE_EXPORT mitk::PixelType MakePixelType (vtkImageData *vtkimagedata)
 deduct the PixelType for a given vtk image More...
 
template<typename ComponentT , typename PixelT >
PixelType MakePixelType (std::size_t numOfComponents)
 A template method for creating a pixel type. More...
 
template<typename ComponentT , typename PixelT , std::size_t numOfComponents>
PixelType MakePixelType ()
 A template method for creating a pixel type. More...
 
template<typename ItkImageType >
PixelType MakePixelType (std::size_t numOfComponents)
 A template method for creating a MITK pixel type na ITK image type. More...
 
template<typename ItkImageType >
PixelType MakePixelType ()
 A template method for creating a MITK pixel type from an ITK image pixel type and dimension. More...
 
PixelType MakePixelType (const itk::ImageIOBase *imageIO)
 Create a MITK pixel type based on a itk::ImageIOBase object. More...
 
template<typename T >
PixelType MakeScalarPixelType ()
 An interface to the MakePixelType method for creating scalar pixel types. More...
 
template<class TCoordRep , unsigned int NPointDimension>
void to_json (nlohmann::json &j, const Point< TCoordRep, NPointDimension > &p)
 
template<class TCoordRep , unsigned int NPointDimension>
void from_json (const nlohmann::json &j, Point< TCoordRep, NPointDimension > &p)
 
template<typename TCoordRep , unsigned int NPointDimension>
bool Equal (const itk::Point< TCoordRep, NPointDimension > &point1, const itk::Point< TCoordRep, NPointDimension > &point2, TCoordRep eps=mitk::eps, bool verbose=false)
 
MITKCORE_EXPORT bool Equal (const mitk::PointSet *leftHandSide, const mitk::PointSet *rightHandSide, mitk::ScalarType eps, bool verbose, bool checkGeometry=true)
 Equal A function comparing two pointsets for being identical. More...
 
MITKCORE_EXPORT bool Equal (const mitk::PointSet &leftHandSide, const mitk::PointSet &rightHandSide, mitk::ScalarType eps, bool verbose, bool checkGeometry=true)
 Equal A function comparing two pointsets for being identical. More...
 
 itkEventMacroDeclaration (PointSetEvent, itk::AnyEvent)
 
 itkEventMacroDeclaration (PointSetMoveEvent, PointSetEvent)
 
 itkEventMacroDeclaration (PointSetSizeChangeEvent, PointSetEvent)
 
 itkEventMacroDeclaration (PointSetAddEvent, PointSetSizeChangeEvent)
 
 itkEventMacroDeclaration (PointSetRemoveEvent, PointSetSizeChangeEvent)
 
 itkEventMacroDeclaration (PointSetExtendTimeRangeEvent, PointSetEvent)
 
MITKCORE_EXPORT std::ostream & operator<< (std::ostream &os, const PropertyKeyPath &path)
 
MITKCORE_EXPORT std::string PropertyKeyPathToPropertyRegEx (const PropertyKeyPath &tagPath)
 
MITKCORE_EXPORT std::string PropertyKeyPathToPersistenceKeyRegEx (const PropertyKeyPath &tagPath)
 
MITKCORE_EXPORT std::string PropertyKeyPathToPersistenceKeyTemplate (const PropertyKeyPath &tagPath)
 
MITKCORE_EXPORT std::string PropertyKeyPathToPersistenceNameTemplate (const PropertyKeyPath &tagPath)
 
MITKCORE_EXPORT PropertyKeyPath PropertyNameToPropertyKeyPath (const std::string &propertyName)
 
MITKCORE_EXPORT std::string PropertyKeyPathToPropertyName (const PropertyKeyPath &tagPath)
 
std::string MITKCORE_EXPORT GeneratePropertyNameForDICOMTag (unsigned int group, unsigned int element)
 
bool MITKCORE_EXPORT GetBackwardsCompatibleDICOMProperty (unsigned int group, unsigned int element, std::string const &backwardsCompatiblePropertyName, PropertyList const *propertyList, std::string &propertyValue)
 
MITKCORE_EXPORT IPropertyPersistenceCreateTestInstancePropertyPersistence ()
 
MITKCORE_EXPORT std::ostream & operator<< (std::ostream &os, const PropertyPersistenceInfo &info)
 
MITKCORE_EXPORT IPropertyRelationsCreateTestInstancePropertyRelations ()
 
MITKCORE_EXPORT bool Equal (const mitk::ProportionalTimeGeometry &leftHandSide, const mitk::ProportionalTimeGeometry &rightHandSide, ScalarType eps, bool verbose)
 Equal A function comparing two ProportionalTimeGeometries for being identical. More...
 
 itkEventMacroDeclaration (RenderingManagerEvent, itk::AnyEvent)
 
 itkEventMacroDeclaration (RenderingManagerViewsInitializedEvent, RenderingManagerEvent)
 
 itkEventMacroDeclaration (FocusChangedEvent, itk::AnyEvent)
 
MITKCORE_EXPORT bool Equal (mitk::Surface *leftHandSide, mitk::Surface *rightHandSide, mitk::ScalarType eps, bool verbose)
 Equal Compare two surfaces for equality, returns true if found equal. More...
 
MITKCORE_EXPORT bool Equal (mitk::Surface &leftHandSide, mitk::Surface &rightHandSide, mitk::ScalarType eps, bool verbose)
 Equal Compare two surfaces for equality, returns true if found equal. More...
 
MITKCORE_EXPORT bool Equal (vtkPolyData *leftHandSide, vtkPolyData *rightHandSide, mitk::ScalarType eps, bool verbose)
 Equal Compare two vtk PolyDatas for equality, returns true if found equal. More...
 
MITKCORE_EXPORT bool Equal (vtkPolyData &leftHandSide, vtkPolyData &rightHandSide, mitk::ScalarType eps, bool verbose)
 Equal Compare two vtk PolyDatas for equality, returns true if found equal. More...
 
TemporoSpatialStringProperty::Pointer MITKCORE_EXPORT ExtractTimeStepFromTemporoSpatialStringProperty (const TemporoSpatialStringProperty *tsProperty, TimeStepType ts)
 
MITKCORE_EXPORT bool Equal (const mitk::TimeGeometry &leftHandSide, const mitk::TimeGeometry &rightHandSide, ScalarType eps, bool verbose)
 Equal A function comparing two instances of TimeGeometry for being identical. More...
 
MITKCORE_EXPORT bool Equal (const mitk::TimeGeometry &leftHandSide, const mitk::TimeGeometry &rightHandSide, ScalarType coordinateEps, ScalarType directionEps, bool verbose)
 Compare two instances of TimeGeometry. More...
 
template<class TOutputRegion , class TInputRegion >
void GenerateTimeInInputRegion (const mitk::TimeGeometry *outputTimeGeometry, const TOutputRegion &outputRegion, const mitk::TimeGeometry *inputTimeGeometry, TInputRegion &inputRegion)
 
template<class TOutputData , class TInputData >
void GenerateTimeInInputRegion (const TOutputData *output, TInputData *input)
 convert the start- and end-index-time of output in start- and end-index-time of input1 and input2 via millisecond-time More...
 
template<class TCoordRep , unsigned int NVectorDimension>
void to_json (nlohmann::json &j, const Vector< TCoordRep, NVectorDimension > &v)
 
template<class TCoordRep , unsigned int NVectorDimension>
void from_json (const nlohmann::json &j, Vector< TCoordRep, NVectorDimension > &v)
 
template<typename TCoordRep , unsigned int NPointDimension>
bool Equal (const itk::Vector< TCoordRep, NPointDimension > &vector1, const itk::Vector< TCoordRep, NPointDimension > &vector2, TCoordRep eps=mitk::eps, bool verbose=false)
 
bool Equal (const mitk::VnlVector &vector1, const mitk::VnlVector &vector2, ScalarType eps=mitk::eps, bool verbose=false)
 
template<typename TCoordRep , unsigned int NPointDimension>
bool Equal (const vnl_vector_fixed< TCoordRep, NPointDimension > &vector1, const vnl_vector_fixed< TCoordRep, NPointDimension > &vector2, TCoordRep eps=mitk::eps, bool verbose=false)
 
template<class Tin , class Tout >
void itk2vtk (const Tin &in, Tout &out)
 
template<class Tin , class Tout >
void vtk2itk (const Tin &in, Tout &out)
 
template<class Tin , class Tout >
void vnl2vtk (const vnl_vector< Tin > &in, Tout *out)
 
template<class Tin , class Tout >
void vtk2vnl (const Tin *in, vnl_vector< Tout > &out)
 
template<class Tin , class Tout , unsigned int n>
void vnl2vtk (const vnl_vector_fixed< Tin, n > &in, Tout *out)
 
template<class Tin , class Tout , unsigned int n>
void vtk2vnl (const Tin *in, vnl_vector_fixed< Tout, n > &out)
 
template<typename U , typename V , unsigned int NRows, unsigned int NColumns>
void TransferMatrix (const itk::Matrix< U, NRows, NColumns > &in, itk::Matrix< V, NRows, NColumns > &out)
 
TestImageType::Pointer MITKTESTINGHELPER_EXPORT GenerateTestImage (int factor=1)
 
TestMaskType::Pointer MITKTESTINGHELPER_EXPORT GenerateTestMask ()
 
Image::Pointer MITKTESTINGHELPER_EXPORT GenerateTestFrame (double timePoint)
 
Image::Pointer MITKTESTINGHELPER_EXPORT GenerateTestMaskMITK ()
 
Image::Pointer MITKTESTINGHELPER_EXPORT GenerateDynamicTestImageMITK ()
 
 itkEventMacroDeclaration (AffineInteractionEvent, itk::AnyEvent)
 
 itkEventMacroDeclaration (ScaleEvent, AffineInteractionEvent)
 
 itkEventMacroDeclaration (RotateEvent, AffineInteractionEvent)
 
 itkEventMacroDeclaration (TranslateEvent, AffineInteractionEvent)
 
std::string MITKDICOM_EXPORT GenerateNameFromDICOMProperties (const mitk::IPropertyProvider *provider)
 
MITKDICOM_EXPORT mitk::DICOMImageFrameList ConvertToDICOMImageFrameList (const DICOMDatasetAccessingImageFrameList &input)
 
MITKDICOM_EXPORT mitk::DICOMDatasetList ConvertToDICOMDatasetList (const DICOMDatasetAccessingImageFrameList &input)
 
MITKDICOM_EXPORT mitk::DICOMDatasetAccessingImageFrameList ConvertToDICOMDatasetAccessingImageFrameList (const DICOMDatasetList &input)
 
std::string PixelSpacingInterpretationToString (const PixelSpacingInterpretation &value)
 Convert mitk::PixelSpacingInterpretation to a human readable string. More...
 
std::string ReaderImplementationLevelToString (const ReaderImplementationLevel &enumValue)
 Convert mitk::ReaderImplementationLevel to a human readable string. More...
 
DICOMFilePathList MITKDICOM_EXPORT GetDICOMFilesInSameDirectory (const std::string &filePath)
 
DICOMFilePathList MITKDICOM_EXPORT FilterForDICOMFiles (const DICOMFilePathList &fileList)
 
DICOMFilePathList MITKDICOM_EXPORT FilterDICOMFilesForSameSeries (const std::string &refFilePath, const DICOMFilePathList &fileList)
 
MITKDICOM_EXPORT mitk::BaseProperty::Pointer GetDICOMPropertyForDICOMValuesFunctor (const DICOMCachedValueLookupTable &cacheLookupTable)
 
MITKDICOM_EXPORT std::map< std::string, BaseProperty::PointerGetPropertyByDICOMTagPath (const PropertyList *list, const DICOMTagPath &path)
 
MITKDICOM_EXPORT std::map< std::string, BaseProperty::PointerGetPropertyByDICOMTagPath (const BaseData *data, const DICOMTagPath &path)
 
template<typename TNumericReturnType >
TNumericReturnType ConvertDICOMStrToValue (const std::string &dcmValueString)
 
template<typename TNumericType >
std::string ConvertValueToDICOMStr (const TNumericType value)
 
void DICOMStringToOrientationVectors (const std::string &s, Vector3D &right, Vector3D &up, bool &successful)
 Convert DICOM string describing a point two Vector3D. More...
 
bool DICOMStringToSpacing (const std::string &s, ScalarType &spacingX, ScalarType &spacingY)
 
Point3D DICOMStringToPoint3D (const std::string &s, bool &successful)
 Convert DICOM string describing a point to Point3D. More...
 
MITKDICOM_EXPORT std::ostream & operator<< (std::ostream &os, const DICOMTagPath &path)
 
MITKDICOM_EXPORT std::string DICOMTagPathToPropertyRegEx (const DICOMTagPath &tagPath)
 
MITKDICOM_EXPORT std::string DICOMTagPathToPersistenceKeyRegEx (const DICOMTagPath &tagPath)
 
MITKDICOM_EXPORT std::string DICOMTagPathToPersistenceKeyTemplate (const DICOMTagPath &tagPath)
 
MITKDICOM_EXPORT std::string DICOMTagPathToPersistenceNameTemplate (const DICOMTagPath &tagPath)
 
MITKDICOM_EXPORT std::string DICOMTagPathToDCMTKSearchPath (const DICOMTagPath &tagPath)
 
MITKDICOM_EXPORT DICOMTagPath PropertyNameToDICOMTagPath (const std::string &propertyName)
 
MITKDICOM_EXPORT std::string DICOMTagPathToPropertyName (const DICOMTagPath &tagPath)
 
DICOMTagPathMapType MITKDICOM_EXPORT GetCurrentDICOMTagsOfInterest ()
 
DICOMTagPathMapType MITKDICOM_EXPORT GetDefaultDICOMTagsOfInterest ()
 
MITKIMAGESTATISTICS_EXPORT ImageStatisticsContainer::ImageStatisticsObject::StatisticNameVector GetAllStatisticNames (const ImageStatisticsContainer *container)
 
MITKIMAGESTATISTICS_EXPORT ImageStatisticsContainer::ImageStatisticsObject::StatisticNameVector GetAllStatisticNames (std::vector< ImageStatisticsContainer::ConstPointer > containers)
 
MITKIMAGESTATISTICS_EXPORT DataNode::Pointer CreateImageStatisticsNode (ImageStatisticsContainer::Pointer statistic, const std::string &name="statistics")
 
mitk::NodePredicateBase::Pointer MITKIMAGESTATISTICS_EXPORT GetImageStatisticsImagePredicate ()
 Gets a predicate for the ImageStatistics plugin input image. More...
 
mitk::NodePredicateBase::Pointer MITKIMAGESTATISTICS_EXPORT GetImageStatisticsMaskPredicate ()
 Gets a predicate for the ImageStatistics plugin input mask. More...
 
mitk::NodePredicateBase::Pointer MITKIMAGESTATISTICS_EXPORT GetImageStatisticsPlanarFigurePredicate ()
 Gets a predicate for the ImageStatistics plugin planar figure. More...
 
MITKIMAGESTATISTICS_EXPORT IntensityProfile::Pointer ComputeIntensityProfile (Image::Pointer image, PlanarFigure::Pointer planarFigure)
 Compute intensity profile of an image for each pixel along the first PolyLine of a given planar figure. More...
 
MITKIMAGESTATISTICS_EXPORT IntensityProfile::Pointer ComputeIntensityProfile (Image::Pointer image, PlanarLine::Pointer planarLine, unsigned int numSamples, InterpolateImageFunction::Enum interpolator=InterpolateImageFunction::NearestNeighbor)
 Compute intensity profile of an image for each sample along a planar line. More...
 
MITKIMAGESTATISTICS_EXPORT IntensityProfile::Pointer ComputeIntensityProfile (Image::Pointer image, const Point3D &startPoint, const Point3D &endPoint, unsigned int numSamples, InterpolateImageFunction::Enum interpolator=InterpolateImageFunction::NearestNeighbor)
 Compute intensity profile of an image for each sample between two points. More...
 
MITKIMAGESTATISTICS_EXPORT IntensityProfile::InstanceIdentifier ComputeGlobalMaximum (IntensityProfile::ConstPointer intensityProfile, IntensityProfile::MeasurementType &max)
 Compute global maximum of an intensity profile. More...
 
MITKIMAGESTATISTICS_EXPORT IntensityProfile::InstanceIdentifier ComputeGlobalMinimum (IntensityProfile::ConstPointer intensityProfile, IntensityProfile::MeasurementType &min)
 Compute global minimum of an intensity profile. More...
 
MITKIMAGESTATISTICS_EXPORT void ComputeIntensityProfileStatistics (IntensityProfile::ConstPointer intensityProfile, ImageStatisticsContainer::ImageStatisticsObject &stats)
 Compute statistics of an intensity profile. More...
 
MITKIMAGESTATISTICS_EXPORT IntensityProfile::InstanceIdentifier ComputeCenterOfMaximumArea (IntensityProfile::ConstPointer intensityProfile, IntensityProfile::InstanceIdentifier radius)
 Compute center of maximum area under the curve of an intensity profile. More...
 
MITKIMAGESTATISTICS_EXPORT std::vector< IntensityProfile::MeasurementType > CreateVectorFromIntensityProfile (IntensityProfile::ConstPointer intensityProfile)
 Convert an intensity profile to a standard library vector. More...
 
MITKIMAGESTATISTICS_EXPORT IntensityProfile::Pointer CreateIntensityProfileFromVector (const std::vector< IntensityProfile::MeasurementType > &vector)
 Convert a standard library vector to an intensity profile. More...
 
void MITKLOG_EXPORT RegisterBackend (LogBackendBase *backend)
 Register a backend in the MITK log mechanism. More...
 
void MITKLOG_EXPORT UnregisterBackend (LogBackendBase *backend)
 Unregister a backend. More...
 
void MITKLOG_EXPORT DistributeToBackends (LogMessage &message)
 Distribute the given message to all registered backends. More...
 
void MITKLOG_EXPORT EnableBackends (LogBackendBase::OutputType type)
 Enable the output of a backend. More...
 
void MITKLOG_EXPORT DisableBackends (LogBackendBase::OutputType type)
 Disable the output of a backend. More...
 
bool MITKLOG_EXPORT IsBackendEnabled (LogBackendBase::OutputType type)
 Check whether the output of this backend is enabled. More...
 
MITKMATCHPOINTREGISTRATION_EXPORT Image::Pointer StitchImages (std::vector< Image::ConstPointer > inputs, std::vector<::map::core::RegistrationBase::ConstPointer > registrations, const BaseGeometry *resultGeometry, const double &paddingValue=0, itk::StitchStrategy stitchStrategy=itk::StitchStrategy::Mean, mitk::ImageMappingInterpolator::Type interpolatorType=mitk::ImageMappingInterpolator::Linear)
 
MITKMATCHPOINTREGISTRATION_EXPORT Image::Pointer StitchImages (std::vector< Image::ConstPointer > inputs, std::vector< MAPRegistrationWrapper::ConstPointer > registrations, const BaseGeometry *resultGeometry, const double &paddingValue=0, itk::StitchStrategy stitchStrategy=itk::StitchStrategy::Mean, mitk::ImageMappingInterpolator::Type interpolatorType=mitk::ImageMappingInterpolator::Linear)
 
MITKMATCHPOINTREGISTRATION_EXPORT Image::Pointer StitchImages (std::vector< Image::ConstPointer > inputs, const BaseGeometry *resultGeometry, const double &paddingValue=0, itk::StitchStrategy stitchStrategy=itk::StitchStrategy::Mean, mitk::ImageMappingInterpolator::Type interpolatorType=mitk::ImageMappingInterpolator::Linear)
 
mitk::MAPRegistrationWrapper::Pointer MITKMATCHPOINTREGISTRATION_EXPORT GenerateIdentityRegistration3D ()
 
void MITKMATCHPOINTREGISTRATION_EXPORT GetGridGeometryFromNode (const mitk::DataNode *regNode, mitk::Geometry3D::Pointer &gridDesc, unsigned int &gridFrequ)
 
vtkSmartPointer< vtkPolyData > MITKMATCHPOINTREGISTRATION_EXPORT Generate3DDeformationGrid (const mitk::BaseGeometry *gridDesc, unsigned int gridFrequence, const map::core::RegistrationKernelBase< 3, 3 > *regKernel=nullptr)
 
vtkSmartPointer< vtkPolyData > MITKMATCHPOINTREGISTRATION_EXPORT Generate3DDeformationGlyph (const mitk::BaseGeometry *gridDesc, const map::core::RegistrationKernelBase< 3, 3 > *regKernel)
 
bool MITKMATCHPOINTREGISTRATION_EXPORT GridIsOutdated (const mitk::DataNode *regNode, const itk::TimeStamp &reference)
 
bool MITKMATCHPOINTREGISTRATION_EXPORT PropertyIsOutdated (const mitk::DataNode *regNode, const std::string &propName, const itk::TimeStamp &reference)
 
const MITKMATCHPOINTREGISTRATION_EXPORT map::core::RegistrationKernelBase< 3, 3 > * GetRelevantRegKernelOfNode (const mitk::DataNode *regNode)
 
MITKMATCHPOINTREGISTRATION_EXPORT mitk::DataNode::Pointer generateRegistrationResultNode (const std::string &nodeName, mitk::MAPRegistrationWrapper::Pointer resultReg, const std::string &algorithmUID, const std::string &movingDataUID, const std::string &targetDataUID)
 
MITKMATCHPOINTREGISTRATION_EXPORT mitk::DataNode::Pointer generateMappedResultNode (const std::string &nodeName, mitk::BaseData::Pointer mappedData, const std::string &regUID, const std::string &inputDataUID, const bool refinedGeometry, const std::string &interpolator="Unkown")
 
 mapEventMacro (FrameRegistrationEvent, ::map::events::TaskBatchEvent, MITKMATCHPOINTREGISTRATION_EXPORT)
 
 mapEventMacro (FrameMappingEvent, ::map::events::TaskBatchEvent, MITKMATCHPOINTREGISTRATION_EXPORT)
 
NodeUIDType MITKMATCHPOINTREGISTRATION_EXPORT EnsureUID (mitk::DataNode *node)
 
bool MITKMATCHPOINTREGISTRATION_EXPORT CheckUID (const mitk::DataNode *node, const NodeUIDType &uid)
 
NodeUIDType MITKMATCHPOINTREGISTRATION_EXPORT EnsureUID (mitk::BaseData *data)
 
bool MITKMATCHPOINTREGISTRATION_EXPORT CheckUID (const mitk::BaseData *data, const NodeUIDType &uid)
 
MITKMODELFIT_EXPORT ModelBase::TimeGridType ExtractTimeGrid (const Image *image)
 
MITKMODELFIT_EXPORT ModelBase::TimeGridType ExtractTimeGrid (const TimeGeometry *geometry)
 
double fresnel_c (double x)
 
double fresnel_s (double x)
 
double fresnel_c2 (double x)
 
double fresnel_s2 (double x)
 
MITKMODELFIT_EXPORT std::string generateModelFitResultImagePath (const std::string &outputPathTemplate, const std::string &parameterName)
 
MITKMODELFIT_EXPORT void storeParameterResultImage (const std::string &outputPathTemplate, const std::string &parameterName, mitk::Image *image, mitk::modelFit::Parameter::Type parameterType=mitk::modelFit::Parameter::ParameterType)
 
MITKMODELFIT_EXPORT void storeModelFitResultImage (const std::string &outputPathTemplate, const std::string &parameterName, mitk::Image *image, mitk::modelFit::Parameter::Type nodeType, const mitk::modelFit::ModelFitInfo *modelFitInfo)
 
MITKMODELFIT_EXPORT void storeModelFitGeneratorResults (const std::string &outputPathTemplate, mitk::ParameterFitImageGeneratorBase *generator, const mitk::modelFit::ModelFitInfo *fitSession)
 
MITKMODELFIT_EXPORT void previewModelFitGeneratorResults (const std::string &outputPathTemplate, mitk::ParameterFitImageGeneratorBase *generator)
 
MITKMODELFIT_EXPORT ModelTraitsInterface::ParameterValueType ReadVoxel (const mitk::Image *image, const mitk::Point3D &position, unsigned int timestep=0, bool noThrow=true)
 
MITKMODELFIT_EXPORT ModelTraitsInterface::ParameterValueType ReadVoxel (const mitk::Image *image, const ::itk::Index< 3 > &index, unsigned int timestep=0, bool noThrow=true)
 
MITKMODELFIT_EXPORT ParameterValueMapType ExtractParameterValueMapFromModelFit (const mitk::modelFit::ModelFitInfo *fitInfo, const mitk::Point3D &position)
 
MITKMODELFIT_EXPORT ParameterValueMapType ExtractParameterValueMapFromModelFit (const mitk::modelFit::ModelFitInfo *fitInfo, const ::itk::Index< 3 > &index)
 
MITKMODELFIT_EXPORT ModelTraitsInterface::ParametersType ConvertParameterMapToParameterVector (const ParameterValueMapType &valueMap, const ModelTraitsInterface *pTraitInterface)
 
void CheckYMinMaxFromPlotDataValues (const PlotDataValues &data, double &min, double &max)
 
void CheckXMinMaxFromPlotDataValues (const PlotDataValues &data, double &min, double &max)
 
MITKMODELFIT_EXPORT PlotDataCurve::Pointer GenerateModelSignalPlotData (const mitk::Point3D &position, const mitk::modelFit::ModelFitInfo *fitInfo, const mitk::ModelBase::TimeGridType &timeGrid, mitk::ModelParameterizerBase *parameterizer=nullptr)
 
MITKMODELFIT_EXPORT PlotDataCurveCollection::Pointer GenerateAdditionalModelFitPlotData (const mitk::Point3D &position, const mitk::modelFit::ModelFitInfo *fitInfo, const mitk::ModelBase::TimeGridType &timeGrid)
 
MITKMODELFIT_EXPORT PlotDataCurve::Pointer GenerateImageSamplePlotData (const mitk::Point3D &position, const mitk::Image *image, const mitk::ModelBase::TimeGridType &timeGrid)
 
const MITKMODELFIT_EXPORT std::string MODEL_FIT_PLOT_SAMPLE_NAME ()
 
const MITKMODELFIT_EXPORT std::string MODEL_FIT_PLOT_SIGNAL_NAME ()
 
const MITKMODELFIT_EXPORT std::string MODEL_FIT_PLOT_INTERPOLATED_SIGNAL_NAME ()
 
MITKMODELFIT_EXPORT std::ostream & operator<< (std::ostream &stream, const ScalarListLookupTable &l)
 Adds the string representation of the given ScalarListLookupTable to the given stream. More...
 
MITKMODELFIT_EXPORT void to_json (nlohmann::json &j, const ScalarListLookupTable &lut)
 
MITKMODELFIT_EXPORT void from_json (const nlohmann::json &j, ScalarListLookupTable &lut)
 
 mitkDeclareGenericProperty (ScalarListLookupTableProperty, ScalarListLookupTable, MITKMODELFIT_EXPORT)
 
MITKMODELFIT_EXPORT bool TimeGridIsMonotonIncreasing (const ModelBase::TimeGridType timeGrid)
 
MITKMODELFIT_EXPORT ModelBase::ModelResultType InterpolateSignalToNewTimeGrid (const ModelBase::ModelResultType &inputSignal, const ModelBase::TimeGridType &inputGrid, const ModelBase::TimeGridType &outputGrid)
 
MITKMODELFIT_EXPORT ModelBase::TimeGridType GenerateSupersampledTimeGrid (const mitk::ModelBase::TimeGridType &grid, const unsigned int samplingRate)
 
MITKMULTILABEL_EXPORT bool Equal (const mitk::Label &leftHandSide, const mitk::Label &rightHandSide, ScalarType eps, bool verbose)
 Equal A function comparing two labels for being equal in data. More...
 
MITKMULTILABEL_EXPORT bool Equal (const mitk::LabelSetImage &leftHandSide, const mitk::LabelSetImage &rightHandSide, ScalarType eps, bool verbose)
 Equal A function comparing two label set images for being equal in meta- and imagedata. More...
 
MITKMULTILABEL_EXPORT bool Equal (const mitk::LabelSetImage::ConstLabelVectorType &leftHandSide, const mitk::LabelSetImage::ConstLabelVectorType &rightHandSide, ScalarType eps, bool verbose)
 Equal A function comparing two vectors of labels for being equal in data. More...
 
MITKMULTILABEL_EXPORT void TransferLabelContentAtTimeStep (const LabelSetImage *sourceImage, LabelSetImage *destinationImage, const TimeStepType timeStep, LabelValueMappingVector labelMapping={ {1, 1} }, MultiLabelSegmentation::MergeStyle mergeStyle=MultiLabelSegmentation::MergeStyle::Replace, MultiLabelSegmentation::OverwriteStyle overwriteStlye=MultiLabelSegmentation::OverwriteStyle::RegardLocks)
 
MITKMULTILABEL_EXPORT void TransferLabelContent (const LabelSetImage *sourceImage, LabelSetImage *destinationImage, LabelValueMappingVector labelMapping={ {1, 1} }, MultiLabelSegmentation::MergeStyle mergeStyle=MultiLabelSegmentation::MergeStyle::Replace, MultiLabelSegmentation::OverwriteStyle overwriteStlye=MultiLabelSegmentation::OverwriteStyle::RegardLocks)
 
MITKMULTILABEL_EXPORT void TransferLabelContentAtTimeStep (const Image *sourceImage, Image *destinationImage, const mitk::ConstLabelVector &destinationLabelVector, const TimeStepType timeStep, mitk::Label::PixelType sourceBackground=LabelSetImage::UNLABELED_VALUE, mitk::Label::PixelType destinationBackground=LabelSetImage::UNLABELED_VALUE, bool destinationBackgroundLocked=false, LabelValueMappingVector labelMapping={ {1, 1} }, MultiLabelSegmentation::MergeStyle mergeStyle=MultiLabelSegmentation::MergeStyle::Replace, MultiLabelSegmentation::OverwriteStyle overwriteStlye=MultiLabelSegmentation::OverwriteStyle::RegardLocks)
 
MITKMULTILABEL_EXPORT void TransferLabelContent (const Image *sourceImage, Image *destinationImage, const mitk::ConstLabelVector &destinationLabelVector, mitk::Label::PixelType sourceBackground=LabelSetImage::UNLABELED_VALUE, mitk::Label::PixelType destinationBackground=LabelSetImage::UNLABELED_VALUE, bool destinationBackgroundLocked=false, LabelValueMappingVector labelMapping={ {1, 1} }, MultiLabelSegmentation::MergeStyle mergeStyle=MultiLabelSegmentation::MergeStyle::Replace, MultiLabelSegmentation::OverwriteStyle overwriteStlye=MultiLabelSegmentation::OverwriteStyle::RegardLocks)
 
MITKMULTILABEL_EXPORT Image::Pointer ConvertLabelSetImageToImage (LabelSetImage::ConstPointer labelSetImage)
 Convert mitk::LabelSetImage to mitk::Image (itk::VectorImage) More...
 
MITKMULTILABEL_EXPORT LabelSetImage::Pointer ConvertImageToLabelSetImage (Image::Pointer image)
 Convert mitk::Image to mitk::LabelSetImage, templating and differentation between itk::Image and itk::VectorImage is internal. More...
 
MITKMULTILABEL_EXPORT LabelSetImage::Pointer ConvertImageVectorToLabelSetImage (const std::vector< mitk::Image::Pointer > &images, const TimeGeometry *timeGeometry)
 
MITKMULTILABEL_EXPORT std::vector< mitk::Image::PointerSplitVectorImage (const Image *vecImage)
 
MITKMULTILABEL_EXPORT LabelSetImage::LabelVectorType GenerateLabelSetWithMappedValues (const LabelSetImage::ConstLabelVectorType &, LabelValueMappingVector labelMapping)
 
MITKMULTILABEL_EXPORT Image::Pointer ConvertImageToGroupImage (const Image *inputImage, mitk::LabelSetImage::LabelValueVectorType &foundLabels)
 
MITKMULTILABEL_EXPORT bool CheckForLabelValueConflictsAndResolve (const mitk::LabelSetImage::LabelValueVectorType &newValues, mitk::LabelSetImage::LabelValueVectorType &usedLabelValues, mitk::LabelSetImage::LabelValueVectorType &correctedLabelValues)
 
MITKMULTILABEL_EXPORT Image::Pointer CreateLabelMask (const LabelSetImage *segmentation, LabelSetImage::LabelValueType labelValue, bool createBinaryMap=true)
 
MITKMULTILABEL_EXPORT std::pair< Image::Pointer, IDToLabelClassNameMapTypeCreateLabelClassMap (const LabelSetImage *segmentation, LabelSetImage::GroupIndexType groupID, const LabelSetImage::LabelValueVectorType &selectedLabels)
 
MITKMULTILABEL_EXPORT std::pair< Image::Pointer, IDToLabelClassNameMapTypeCreateLabelClassMap (const LabelSetImage *segmentation, LabelSetImage::GroupIndexType groupID)
 
mitk::NodePredicateBase::Pointer MITKMULTILABEL_EXPORT GetMultiLabelSegmentationPredicate (const mitk::BaseGeometry *referenceGeometry=nullptr)
 Gets a predicate for a valid multi label segmentation node. More...
 
mitk::NodePredicateBase::Pointer MITKMULTILABEL_EXPORT GetSegmentationReferenceImagePredicate ()
 Gets a predicate for the images that can be used as reference for a segmentation. More...
 
MITKPHARMACOKINETICS_EXPORT ModelBase::StaticParameterValuesType convertArrayToParameter (itk::Array< double > array)
 
MITKPHARMACOKINETICS_EXPORT itk::Array< double > convertParameterToArray (ModelBase::StaticParameterValuesType)
 
itk::Array< double > convoluteAIFWithExponential (mitk::ModelBase::TimeGridType timeGrid, mitk::AIFBasedModelBase::AterialInputFunctionType aif, double lambda)
 
itk::Array< double > convoluteAIFWithConstant (mitk::ModelBase::TimeGridType timeGrid, mitk::AIFBasedModelBase::AterialInputFunctionType aif, double constant)
 
MITKPLANARFIGURE_EXPORT bool Equal (const mitk::PlanarFigure &leftHandSide, const mitk::PlanarFigure &rightHandSide, ScalarType eps, bool verbose)
 
 itkEventMacroDeclaration (PlanarFigureEvent, itk::AnyEvent)
 
 itkEventMacroDeclaration (StartPlacementPlanarFigureEvent, PlanarFigureEvent)
 
 itkEventMacroDeclaration (EndPlacementPlanarFigureEvent, PlanarFigureEvent)
 
 itkEventMacroDeclaration (SelectPlanarFigureEvent, PlanarFigureEvent)
 
 itkEventMacroDeclaration (StartInteractionPlanarFigureEvent, PlanarFigureEvent)
 
 itkEventMacroDeclaration (EndInteractionPlanarFigureEvent, PlanarFigureEvent)
 
 itkEventMacroDeclaration (StartHoverPlanarFigureEvent, PlanarFigureEvent)
 
 itkEventMacroDeclaration (EndHoverPlanarFigureEvent, PlanarFigureEvent)
 
 itkEventMacroDeclaration (ContextMenuPlanarFigureEvent, PlanarFigureEvent)
 
 itkEventMacroDeclaration (PointMovedPlanarFigureEvent, PlanarFigureEvent)
 
MITKQTWIDGETS_EXPORT void PutPreferredDataStorageInspector (const DataStorageInspectorIDType &id)
 
MITKQTWIDGETS_EXPORT DataStorageInspectorIDType GetPreferredDataStorageInspector ()
 
MITKQTWIDGETS_EXPORT void PutVisibleDataStorageInspectors (const VisibleDataStorageInspectorMapType &inspectors)
 
MITKQTWIDGETS_EXPORT VisibleDataStorageInspectorMapType GetVisibleDataStorageInspectors ()
 
MITKQTWIDGETS_EXPORT void PutShowFavoritesInspector (bool show)
 
MITKQTWIDGETS_EXPORT bool GetShowFavoritesInspector ()
 
MITKQTWIDGETS_EXPORT void PutShowHistoryInspector (bool show)
 
MITKQTWIDGETS_EXPORT bool GetShowHistoryInspector ()
 
MITKREGISTRATIONONTOLOGY_EXPORT void FindClosestSegmentationMask ()
 
MITKREMESHING_EXPORT Surface::Pointer Remesh (const Surface *surface, TimeStepType t, int numVertices, double gradation, int subsampling=10, double edgeSplitting=0.0, int optimizationLevel=1, bool forceManifold=false, bool boundaryFixing=false)
 Remesh a surface and store the result in a new surface. More...
 
MITKROI_EXPORT void to_json (nlohmann::json &j, const ROI::Element &roi)
 
MITKROI_EXPORT void from_json (const nlohmann::json &j, ROI::Element &roi)
 
void MITKRT_EXPORT ConfigureNodeAsDoseNode (mitk::DataNode *doseNode, const mitk::IsoDoseLevelSet *colorPreset, mitk::DoseValueAbs referenceDose, bool showColorWashGlobal=true)
 
void MITKRT_EXPORT ConfigureNodeAsIsoLineNode (mitk::DataNode *doseOutlineNode, const mitk::IsoDoseLevelSet *colorPreset, mitk::DoseValueAbs referenceDose, bool showIsolinesGlobal=true)
 
IsoDoseLevelSet::Pointer MITKRT_EXPORT GenerateIsoLevels_Virtuos ()
 
template<typename NUMBER_TYPE , typename STRING_ARRAY , typename DOUBLE_ARRAY >
void StringsToNumbers (unsigned int count, const STRING_ARRAY &strings, DOUBLE_ARRAY &numbers)
 
 itkEventMacroDeclaration (ToolEvent, itk::ModifiedEvent)
 Basic tool event without any parameters Can simply be inherited using the itkEventMacro, e.g. More...
 
MITK_GUI_COMMON_PLUGIN IRenderingManagerMakeRenderingManagerInterface (RenderingManager::Pointer manager)
 

Variables

constexpr double NODE_PREDICATE_GEOMETRY_DEFAULT_CHECK_COORDINATE_PRECISION
 
constexpr double NODE_PREDICATE_GEOMETRY_DEFAULT_CHECK_DIRECTION_PRECISION
 
const MITKCORE_EXPORT ScalarType eps
 
const MITKCORE_EXPORT ScalarType sqrteps
 
const MITKCORE_EXPORT double large
 
static const int PixelUserType
 
static const int PixelComponentUserType
 
static const TimeStepType TIMESTEP_INVALID
 
static const std::string STATS_HISTOGRAM_BIN_PROPERTY_NAME
 
static const std::string STATS_IGNORE_ZERO_VOXEL_PROPERTY_NAME
 
static const std::string STATS_GENERATION_STATUS_PROPERTY_NAME
 
static const std::string STATS_GENERATION_STATUS_VALUE_WORK_IN_PROGRESS
 
static const std::string STATS_GENERATION_STATUS_VALUE_PENDING
 
static const std::string STATS_GENERATION_STATUS_VALUE_BASE_DATA_FAILED
 
constexpr double MASK_SUITABILITY_TOLERANCE_COORDINATE
 
constexpr double MASK_SUITABILITY_TOLERANCE_DIRECTION
 
static const char * replace []
 This is a dictionary to replace long names of classes, modules, etc. to shorter versions in the console output. More...
 
const char *const Prop_RegAlgUsed
 
const char *const Prop_RegAlgTargetData
 
const char *const Prop_RegAlgMovingData
 
const char *const Prop_RegUID
 
const char *const Prop_MappingInput
 
const char *const Prop_MappingInputData
 
const char *const Prop_MappingInterpolator
 
const char *const Prop_MappingRefinedGeometry
 
const char *const Prop_UID
 
const char *const nodeProp_UID
 
const char *const nodeProp_RegVisGrid
 
const char *const nodeProp_RegVisGlyph
 
const char *const nodeProp_RegVisPoints
 
const char *const nodeProp_RegVisDirection
 
const char *const nodeProp_RegVisFOVSize
 
const char *const nodeProp_RegVisFOVOrigin
 
const char *const nodeProp_RegVisFOVSpacing
 
const char *const nodeProp_RegVisFOVOrientation1
 
const char *const nodeProp_RegVisFOVOrientation2
 
const char *const nodeProp_RegVisFOVOrientation3
 
const char *const nodeProp_RegVisGridFrequence
 
const char *const nodeProp_RegVisGridShowStart
 
const char *const nodeProp_RegVisColorStyle
 
const char *const nodeProp_RegVisGridStartColor
 
const char *const nodeProp_RegVisColorUni
 
const char *const nodeProp_RegVisColor1Value
 
const char *const nodeProp_RegVisColor1Magnitude
 
const char *const nodeProp_RegVisColor2Value
 
const char *const nodeProp_RegVisColor2Magnitude
 
const char *const nodeProp_RegVisColor3Value
 
const char *const nodeProp_RegVisColor3Magnitude
 
const char *const nodeProp_RegVisColor4Value
 
const char *const nodeProp_RegVisColor4Magnitude
 
const char *const nodeProp_RegVisColorInterpolate
 
const char *const nodeProp_RegEvalStyle
 
const char *const nodeProp_RegEvalBlendFactor
 
const char *const nodeProp_RegEvalCheckerCount
 
const char *const nodeProp_RegEvalWipeStyle
 
const char *const nodeProp_RegEvalTargetContour
 
const char *const nodeProp_RegEvalCurrentPosition
 
const constexpr char *const PROPERTY_NAME_TIMEGEOMETRY_TYPE
 
const constexpr char *const PROPERTY_NAME_TIMEGEOMETRY_TIMEPOINTS
 
const constexpr char *const PROPERTY_KEY_TIMEGEOMETRY_TYPE
 
const constexpr char *const PROPERTY_KEY_TIMEGEOMETRY_TIMEPOINTS
 
const constexpr char *const PROPERTY_KEY_UID
 

Detailed Description

Find image slices visible on a given plane.

Qmitk.

Render window layer helper functions to retrieve the currently valid layer stack.

Generates MITK events from VTK.

The class name is not helpful in finding this class. Good suggestions welcome.

Given a PlaneGeometry (e.g. the 2D plane of a render window), this class calculates which slices of an mitk::Image are visible on this plane. Calculation is done for X, Y, and Z direction, the result is available in form of a pair (minimum,maximum) slice index.

Such calculations are useful if you want to display information about the currently visible slice (overlays, statistics, ...) and you don't want to depend on any prior information about hat the renderwindow is currently showing.

Warning
The interface attempts to look like an ITK filter but it is far from being one.

Note: A Click with the MiddleButton is to be handled with MousePressEvents

This class is the NON-QT dependent pendant to QmitkEventAdapter. It provides static functions to set up MITK events from VTK source data

Typedef Documentation

◆ ActionVectorType

◆ AffineTransform3D

using mitk::AffineTransform3D = typedef itk::ScalableAffineTransform<ScalarType, 3>

Definition at line 23 of file mitkAffineTransform3D.h.

◆ BaseProcess

Definition at line 20 of file mitkBaseProcess.h.

◆ BoolList

typedef std::vector<bool> mitk::BoolList

Definition at line 23 of file mitkDICOMEnums.h.

◆ BoolToolEvent

Definition at line 165 of file mitkToolEvents.h.

◆ BoundingBox

typedef itk::BoundingBox<unsigned long, 3, ScalarType> mitk::BoundingBox

Standard 3D-BoundingBox typedef.

Standard 3D-BoundingBox typedef to get rid of template arguments (3D, type).

Definition at line 40 of file mitkBaseGeometry.h.

◆ Color

typedef itk::RGBPixel<float> mitk::Color

Color Standard RGB color typedef (float)

Standard RGB color typedef to get rid of template argument (float). Color range is from 0.0f to 1.0f for each component.

Definition at line 38 of file mitkColorProperty.h.

◆ ConditionVectorType

Definition at line 30 of file mitkStateMachineTransition.h.

◆ ConstLabelVector

using mitk::ConstLabelVector = typedef std::vector<Label::ConstPointer>

Definition at line 92 of file mitkLabel.h.

◆ DataStorageInspectorIDType

using mitk::DataStorageInspectorIDType = typedef std::string

Definition at line 23 of file QmitkNodeSelectionPreferenceHelper.h.

◆ DICOMDatasetAccessingImageFrameList

typedef std::vector<DICOMDatasetAccessingImageFrameInfo::Pointer> mitk::DICOMDatasetAccessingImageFrameList

Definition at line 46 of file mitkDICOMDatasetAccessingImageFrameInfo.h.

◆ DICOMDatasetList

Definition at line 70 of file mitkDICOMDatasetAccess.h.

◆ DICOMFilePathList

typedef std::vector<std::string> mitk::DICOMFilePathList

Definition at line 23 of file mitkDICOMFilesHelper.h.

◆ DICOMGDCMImageFrameList

typedef std::vector<DICOMGDCMImageFrameInfo::Pointer> mitk::DICOMGDCMImageFrameList

Definition at line 57 of file mitkDICOMGDCMImageFrameInfo.h.

◆ DICOMImageFrameList

typedef std::vector<DICOMImageFrameInfo::Pointer> mitk::DICOMImageFrameList

Definition at line 53 of file mitkDICOMImageFrameInfo.h.

◆ DICOMProperty

◆ DICOMTagList

typedef std::vector<DICOMTag> mitk::DICOMTagList

Definition at line 59 of file mitkDICOMTag.h.

◆ DICOMTagPathList

typedef std::vector<DICOMTagPath> mitk::DICOMTagPathList

Definition at line 155 of file mitkDICOMTagPath.h.

◆ DICOMTagPathMapType

typedef std::map<DICOMTagPath, std::string> mitk::DICOMTagPathMapType

Type specifies tags of interest. Key is the tag path of interest. The value is an optional user defined name for the property that should be used to store the tag value(s). Empty value is default and will imply to use the found DICOMTagPath as property name.

Definition at line 28 of file mitkDICOMTagsOfInterestHelper.h.

◆ DoseValueAbs

typedef double mitk::DoseValueAbs

Represents absolute dose values (in Gy).

Definition at line 23 of file mitkDoseValueType.h.

◆ DoseValueRel

typedef double mitk::DoseValueRel

Represents relative dose values (in %).

Definition at line 28 of file mitkDoseValueType.h.

◆ DoubleVectorProperty

Definition at line 131 of file mitkVectorProperty.h.

◆ DoubleVectorPropertySerializer

◆ FastSymmetricForcesDemonsMultiResDefaultRegistrationAlgorithm

template<typename TImageType >
using mitk::FastSymmetricForcesDemonsMultiResDefaultRegistrationAlgorithm = typedef map::algorithm::boxed::ITKFastSymmetricForcesDemonsMultiResRegistrationAlgorithm<TImageType, map::algorithm::mitkFastSymmetricForcesDemonsMultiResDefaultRegistrationAlgorithmUIDPolicy>

◆ FixedArrayType

typedef itk::FixedArray<ScalarType, 3> mitk::FixedArrayType

Definition at line 45 of file mitkBaseGeometry.h.

◆ FloatToolEvent

Definition at line 164 of file mitkToolEvents.h.

◆ Geometry2D

Deprecated:
(as of 2014_10) This class is deprecated. Please use PlaneGeometry instead.

Definition at line 69 of file mitkPlaneGeometry.h.

◆ Geometry2DData

Deprecated:
(as of 2014_10) This class is deprecated. Please use PlaneGeometryData instead.

Definition at line 23 of file mitkPlaneGeometryData.h.

◆ Geometry2DDataToSurfaceFilter

Deprecated:
(as of 2014_10) This class is deprecated. Please use PlaneGeometryDataToSurfaceFilter instead.

Definition at line 36 of file mitkPlaneGeometryDataToSurfaceFilter.h.

◆ Geometry2DDataVtkMapper3D

Deprecated:
(as of 2014_10) This class is deprecated. Please use PlaneGeometryDataVTKMapper3D instead.

Definition at line 40 of file mitkPlaneGeometryDataVtkMapper3D.h.

◆ GLMapper2D

Definition at line 22 of file mitkGLMapper2D.h.

◆ IDToLabelClassNameMapType

using mitk::IDToLabelClassNameMapType = typedef std::map<LabelSetImage::LabelValueType, std::string>

Definition at line 52 of file mitkLabelSetImageConverter.h.

◆ IntegerToolEvent

Definition at line 163 of file mitkToolEvents.h.

◆ IntensityProfile

typedef itk::Statistics::ListSample<itk::Statistics::MeasurementVectorPixelTraits<ScalarType>::MeasurementVectorType> mitk::IntensityProfile

Definition at line 24 of file mitkIntensityProfile.h.

◆ IntVectorProperty

Definition at line 132 of file mitkVectorProperty.h.

◆ IntVectorPropertySerializer

◆ IsoDoseLevelVector

typedef ::itk::VectorContainer<unsigned int, mitk::IsoDoseLevel::Pointer> mitk::IsoDoseLevelVector

Definition at line 30 of file mitkIsoDoseLevelCollections.h.

◆ itkIOComponentType

typedef itk::IOComponentEnum mitk::itkIOComponentType

Definition at line 175 of file mitkPixelTypeTraits.h.

◆ itkIOPixelType

typedef itk::IOPixelEnum mitk::itkIOPixelType

Definition at line 174 of file mitkPixelTypeTraits.h.

◆ LabelValueMappingVector

using mitk::LabelValueMappingVector = typedef std::vector < std::pair<Label::PixelType, Label::PixelType> >

Definition at line 620 of file mitkLabelSetImage.h.

◆ LabelVector

using mitk::LabelVector = typedef std::vector<Label::Pointer>

Definition at line 91 of file mitkLabel.h.

◆ LevelSetMotionMultiResDefaultRegistrationAlgorithm

template<typename TImageType >
using mitk::LevelSetMotionMultiResDefaultRegistrationAlgorithm = typedef map::algorithm::boxed::ITKLevelSetMotionMultiResRegistrationAlgorithm<TImageType, map::algorithm::mitkLevelSetMotionMultiResDefaultRegistrationAlgorithmUIDPolicy>

◆ Line3D

typedef Line< ScalarType, 3 > mitk::Line3D

Definition at line 409 of file mitkLine.h.

◆ LinearModelParameterizer

◆ MaterialVectorContainer

typedef itk::VectorContainer<unsigned int, Material::Pointer> mitk::MaterialVectorContainer

Definition at line 450 of file mitkMaterial.h.

◆ Matrix2D

Definition at line 84 of file mitkMatrix.h.

◆ Matrix3D

Definition at line 85 of file mitkMatrix.h.

◆ Matrix4D

Definition at line 86 of file mitkMatrix.h.

◆ MoveSurfaceInteractor

typedef MoveBaseDataInteractor mitk::MoveSurfaceInteractor

Definition at line 21 of file mitkMoveSurfaceInteractor.h.

◆ MultiModalRigidHeadNeckRegistrationAlgorithm

template<class TImageType >
using mitk::MultiModalRigidHeadNeckRegistrationAlgorithm = typedef typename map::algorithm::boxed::MultiModalRigidHeadNeckRegistrationAlgorithm<TImageType, ::map::algorithm::mitkMultiModalRigidHeadNeckRegistrationAlgorithmUIDPolicy>

◆ MultiModalRigidSlabbedHeadRegistrationAlgorithm

template<class TImageType >
using mitk::MultiModalRigidSlabbedHeadRegistrationAlgorithm = typedef typename map::algorithm::boxed::MultiModalRigidSlabbedHeadRegistrationAlgorithm<TImageType, ::map::algorithm::mitkMultiModalRigidSlabbedHeadRegistrationAlgorithmUIDPolicy>

◆ NodeUIDType

typedef std::string mitk::NodeUIDType

Definition at line 26 of file mitkUIDHelper.h.

◆ OperationType

typedef int mitk::OperationType

Definition at line 23 of file mitkOperation.h.

◆ ParameterValueMapType

◆ PlotDataCurveCollection

using mitk::PlotDataCurveCollection = typedef itk::MapContainer<std::string, PlotDataCurve::Pointer>

Collection of plot curves, e.g. every plot curve for a certain world coordinate position

Definition at line 70 of file mitkModelFitPlotDataHelper.h.

◆ PlotDataValues

using mitk::PlotDataValues = typedef std::vector<std::pair<double, double> >

Definition at line 36 of file mitkModelFitPlotDataHelper.h.

◆ Point2D

Definition at line 112 of file mitkPoint.h.

◆ Point2I

typedef Point<int, 2> mitk::Point2I

Definition at line 116 of file mitkPoint.h.

◆ Point3D

Definition at line 113 of file mitkPoint.h.

◆ Point3I

typedef Point<int, 3> mitk::Point3I

Definition at line 117 of file mitkPoint.h.

◆ Point4D

Definition at line 114 of file mitkPoint.h.

◆ Point4I

typedef Point<int, 4> mitk::Point4I

Definition at line 118 of file mitkPoint.h.

◆ Quaternion

typedef vnl_quaternion<ScalarType> mitk::Quaternion

Definition at line 21 of file mitkQuaternion.h.

◆ RigidClosedFormPointsDefaultRegistrationAlgorithm

template<typename TPointSetType >
using mitk::RigidClosedFormPointsDefaultRegistrationAlgorithm = typedef typename map::algorithm::boxed::ITKRigid3DClosedFormRegistrationAlgorithmTemplate<TPointSetType, ::map::algorithm::mitkRigidClosedFormPointsDefaultRegistrationAlgorithmUIDPolicy>::Type

◆ RigidICPDefaultRegistrationAlgorithm

template<typename TPointSetType >
using mitk::RigidICPDefaultRegistrationAlgorithm = typedef map::algorithm::boxed::ITKRigid3DICPRegistrationAlgorithm<TPointSetType, TPointSetType, ::map::algorithm::mitkRigidICPDefaultRegistrationAlgorithmUIDPolicy>

Definition at line 25 of file mitkRigidICPDefaultRegistrationAlgorithm.h.

◆ ScalarType

typedef double mitk::ScalarType

Definition at line 20 of file mitkNumericConstants.h.

◆ SpStateMachineState

◆ StringList

typedef std::vector<std::string> mitk::StringList

Definition at line 22 of file mitkDICOMEnums.h.

◆ TestImageType

Definition at line 26 of file mitkTestDynamicImageGenerator.h.

◆ TestMaskType

typedef itk::Image<unsigned char> mitk::TestMaskType

Definition at line 27 of file mitkTestDynamicImageGenerator.h.

◆ TimeBounds

typedef itk::FixedArray<ScalarType, 2> mitk::TimeBounds

Standard typedef for time-bounds.

Definition at line 44 of file mitkBaseGeometry.h.

◆ TimePointType

Definition at line 26 of file mitkTimeGeometry.h.

◆ TimeStepType

typedef std::size_t mitk::TimeStepType

Definition at line 27 of file mitkTimeGeometry.h.

◆ Vector2D

Definition at line 154 of file mitkVector.h.

◆ Vector3D

Definition at line 155 of file mitkVector.h.

◆ Vector4D

Definition at line 156 of file mitkVector.h.

◆ VisibleDataStorageInspectorMapType

map containing the IDs of all inspectors that should be visible. The map key is the order of appearance of the respective inspector.

Definition at line 27 of file QmitkNodeSelectionPreferenceHelper.h.

◆ VnlVector

typedef vnl_vector<ScalarType> mitk::VnlVector

Definition at line 159 of file mitkVector.h.

◆ VtkMapper2D

Definition at line 22 of file mitkVtkMapper2D.h.

◆ VtkMapper3D

Definition at line 22 of file mitkVtkMapper3D.h.

◆ XnatSession

typedef ctkXnatSession mitk::XnatSession

Definition at line 22 of file mitkXnatSession.h.

Enumeration Type Documentation

◆ anonymous enum

anonymous enum
Enumerator
PropertyRole 

Definition at line 31 of file QmitkPropertyItemModel.h.

◆ AnatomicalPlane

enum mitk::AnatomicalPlane
strong
Enumerator
Axial 
Sagittal 
Coronal 
Original 

Definition at line 18 of file mitkAnatomicalPlanes.h.

◆ AntiAliasing

enum mitk::AntiAliasing : int
strong
Enumerator
None 
FastApproximate 

Definition at line 18 of file mitkAntiAliasing.h.

◆ BorderCondition

Enumerator
Constant 
Periodic 
ZeroFluxNeumann 

Definition at line 23 of file mitkTransformationOperation.h.

◆ EActions

Enumerator
AcDONOTHING 
AcINITNEWOBJECT 
AcINITEDITOBJECT 
AcINITEDITGROUP 
AcINITMOVEMENT 
AcINITMOVE 
AcINITFOREGROUND 
AcINITBACKGROUND 
AcINITNEUTRAL 
AcINITUPDATE 
AcADDPOINT 
AcADDPOINTRMB 
AcADD 
AcADDLINE 
AcADDANDFINISH 
AcADDSELECTEDTOGROUP 
AcCHECKPOINT 
AcCHECKLINE 
AcCHECKCELL 
AcCHECKELEMENT 
AcCHECKOBJECT 
AcCHECKNMINUS1 
AcCHECKEQUALS1 
AcCHECKNUMBEROFPOINTS 
AcCHECKSELECTED 
AcCHECKONESELECTED 
AcCHECKHOVERING 
AcCHECKGREATERZERO 
AcCHECKGREATERTWO 
AcCHECKOPERATION 
AcCHECKONESUBINTERACTOR 
AcCHECKSUBINTERACTORS 
AcFINISHOBJECT 
AcFINISHGROUP 
AcFINISHMOVEMENT 
AcFINISHMOVE 
AcFINISH 
AcSEARCHOBJECT 
AcSEARCHGROUP 
AcSEARCHANOTHEROBJECT 
AcSELECTPICKEDOBJECT 
AcSELECTANOTHEROBJECT 
AcSELECTGROUP 
AcSELECTALL 
AcSELECT 
AcSELECTPOINT 
AcSELECTLINE 
AcSELECTCELL 
AcSELECTSUBOBJECT 
AcDESELECTOBJECT 
AcDESELECTALL 
AcDESELECT 
AcDESELECTPOINT 
AcDESELECTLINE 
AcDESELECTCELL 
AcNEWPOINT 
AcNEWSUBOBJECT 
AcMOVEPOINT 
AcMOVESELECTED 
AcMOVE 
AcMOVEPOINTUP 
AcMOVEPOINTDOWN 
AcREMOVEPOINT 
AcREMOVE 
AcREMOVELINE 
AcREMOVEALL 
AcREMOVESELECTEDSUBOBJECT 
AcWHEEL 
AcPLUS 
AcMINUS 
AcDELETEPOINT 
AcCLEAR 
AcINSERTPOINT 
AcINSERTLINE 
AC_SET_NEXT_BUTTON_VISIBLE 
AC_SET_NEXT_BUTTON_INVISIBLE 
AC_SET_PREVIOUS_BUTTON_VISIBLE 
AC_SET_PREVIOUS_BUTTON_INVISIBLE 
AC_SET_ASSISTAND_WIDGET_STECK 
AC_SETMAX_COUNT_REF_POINTS 
AC_SET_NEXT_BUTTON_TEXT 
AC_CHECK_LANDMARK_COUNT 
AC_SET_DONE_FALSE 
AC_INIT 
AC_SET_APPLICATION_SELECTED_FALSE 
AC_SENSOR_ATTACHED 
AC_CLOSE_ASSISTENT 
AC_START_APPLICATION_TEXT 
AC_START_NAVIGATION 
AC_START_PATHCOLLECTION 
AC_LOAD_LANDMARKS 
AC_CALCULATE_LANDMARK_TRANSFORM 
AcTERMINATE_INTERACTION 
AcTRANSLATESTART 
AcTRANSLATE 
AcSCALESTART 
AcSCALE 
AcROTATESTART 
AcROTATE 
AcINITAFFINEINTERACTIONS 
AcFINISHAFFINEINTERACTIONS 
AcTRANSLATEEND 
AcSCALEEND 
AcROTATEEND 
AcINITZOOM 
AcZOOM 
AcSCROLL 
AcLEVELWINDOW 
AcSCROLLMOUSEWHEEL 
AcSETSTARTPOINT 
AcMODEDESELECT 
AcMODESELECT 
AcMODESUBSELECT 
AcINFORMLISTENERS 
AcASKINTERACTORS 
AcCHECKGREATERONE 
AcCHECKBOUNDINGBOX 
AcFORCESUBINTERACTORS 
AcSENDCOORDINATES 
AcTRANSMITEVENT 
AcPERIPHERYSEARCH 
AcROOTSEARCH 
AcTHICKSTVESSELSEARCH 
AcSHORTESTPATHSEARCH 
AcSINGLE 
AcATTRIBUTATION 
AcDEFAULT 
AcSETVESSELELEMENT 
AcCHECKBARRIERSTATUS 
AcUPDATEMESH 
AcINCREASE 
AcDECREASE 
AcMODIFY 
AcUNDOUPDATE 
AcENTEROBJECT 
AcLEAVEOBJECT 
AcSWITCHOBJECT 
AcUPDATELINE 
AcINITLINE 
AcTERMINATELINE 
AcCREATEBOX 
AcCREATEOBJECTFROMLINE 
AcCANCEL 
AcACTIVATETOOL 
AcROTATEAROUNDPOINT1 
AcROTATEAROUNDPOINT2 
AcMOVEPOINT1 
AcMOVEPOINT2 
AcUPDATEPOINT 
AcUPDATERADIUSMOUSEWHEEL 
AcDISPLAYOPTIONS 
AcCYCLE 
AcACCEPT 
AcCHECKPOSITION 
AcINITIALIZECONTOUR 
AcCALCULATENEWSEGMENTATION_SP 
AcINTERACTOR 
AcCALCULATENEWSEGMENTATION_BB 

Definition at line 247 of file mitkInteractionConst.h.

◆ EButtonStates

Enumerator
BS_NoButton 
BS_LeftButton 
BS_RightButton 
BS_MidButton 
BS_MouseButtonMask 
BS_ShiftButton 
BS_ControlButton 
BS_AltButton 
BS_MetaButton 
BS_KeyButtonMask 
BS_Keypad 

Definition at line 497 of file mitkInteractionConst.h.

◆ EEventIds

Enumerator
EIDNULLEVENT