Medical Imaging Interaction Toolkit  2018.4.99-08619e4f
Medical Imaging Interaction Toolkit
mitk::OneTissueCompartmentModelParameterizer Class Reference

#include <mitkOneTissueCompartmentModelParameterizer.h>

Inheritance diagram for mitk::OneTissueCompartmentModelParameterizer:
Collaboration diagram for mitk::OneTissueCompartmentModelParameterizer:

Public Types

typedef OneTissueCompartmentModelParameterizer Self
 
typedef mitk::AIFBasedModelParameterizerBase< mitk::OneTissueCompartmentModelSuperclass
 
typedef itk::SmartPointer< SelfPointer
 
typedef itk::SmartPointer< const SelfConstPointer
 
typedef Superclass::ModelBaseType ModelBaseType
 
typedef Superclass::ModelBasePointer ModelBasePointer
 
typedef Superclass::ModelType ModelType
 
typedef ModelType::Pointer ModelPointer
 
typedef Superclass::StaticParameterValueType StaticParameterValueType
 
typedef Superclass::StaticParameterValuesType StaticParameterValuesType
 
typedef Superclass::StaticParameterMapType StaticParameterMapType
 
typedef Superclass::IndexType IndexType
 
- Public Types inherited from mitk::AIFBasedModelParameterizerBase< mitk::OneTissueCompartmentModel >
typedef AIFBasedModelParameterizerBase< mitk::OneTissueCompartmentModelSelf
 
typedef ConcreteModelParameterizerBase< mitk::OneTissueCompartmentModelSuperclass
 
typedef itk::SmartPointer< SelfPointer
 
typedef itk::SmartPointer< const SelfConstPointer
 
typedef Superclass::ModelBaseType ModelBaseType
 
typedef Superclass::ModelBasePointer ModelBasePointer
 
typedef Superclass::ModelType ModelType
 
typedef Superclass::ModelPointer ModelPointer
 
typedef Superclass::StaticParameterValueType StaticParameterValueType
 
typedef Superclass::StaticParameterValuesType StaticParameterValuesType
 
typedef Superclass::StaticParameterMapType StaticParameterMapType
 
typedef Superclass::IndexType IndexType
 
- Public Types inherited from mitk::ConcreteModelParameterizerBase< mitk::OneTissueCompartmentModel >
typedef ConcreteModelParameterizerBase< mitk::OneTissueCompartmentModelSelf
 
typedef ModelParameterizerBase Superclass
 
typedef itk::SmartPointer< SelfPointer
 
typedef itk::SmartPointer< const SelfConstPointer
 
typedef Superclass::ModelBaseType ModelBaseType
 
typedef Superclass::ModelBasePointer ModelBasePointer
 
typedef mitk::OneTissueCompartmentModel ModelType
 
typedef ModelType::Pointer ModelPointer
 
typedef Superclass::StaticParameterValueType StaticParameterValueType
 
typedef Superclass::StaticParameterValuesType StaticParameterValuesType
 
typedef Superclass::StaticParameterMapType StaticParameterMapType
 
typedef Superclass::IndexType IndexType
 
- Public Types inherited from mitk::ModelParameterizerBase
typedef ModelParameterizerBase Self
 
typedef itk::Object Superclass
 
typedef itk::SmartPointer< SelfPointer
 
typedef itk::SmartPointer< const SelfConstPointer
 
typedef ModelBase ModelBaseType
 
typedef ModelBaseType::Pointer ModelBasePointer
 
typedef ModelBaseType::ParametersType ParametersType
 
typedef ModelBaseType::StaticParameterValueType StaticParameterValueType
 
typedef ModelBaseType::StaticParameterValuesType StaticParameterValuesType
 
typedef ModelBaseType::StaticParameterMapType StaticParameterMapType
 
typedef ModelBaseType::TimeGridType TimeGridType
 
typedef ::itk::Index< 3 > IndexType
 
- Public Types inherited from mitk::ModelTraitsInterface
typedef itk::Array< double > ModelResultType
 
using ParameterValueType = double
 
typedef itk::Array< ParameterValueTypeParametersType
 
typedef std::string ParameterNameType
 
typedef std::vector< ParameterNameTypeParameterNamesType
 
typedef ParametersType::SizeValueType ParametersSizeType
 
typedef ParameterNamesType DerivedParameterNamesType
 
typedef ParametersSizeType DerivedParametersSizeType
 
typedef std::map< ParameterNameType, double > ParamterScaleMapType
 
typedef std::map< ParameterNameType, std::string > ParamterUnitMapType
 
typedef std::map< ParameterNameType, double > DerivedParamterScaleMapType
 
typedef std::map< ParameterNameType, std::string > DerivedParamterUnitMapType
 
typedef std::string FunctionStringType
 
typedef std::string ModellClassIDType
 

Public Member Functions

virtual const char * GetClassName () const
 
ParametersType GetDefaultInitialParameterization () const override
 
- Public Member Functions inherited from mitk::AIFBasedModelParameterizerBase< mitk::OneTissueCompartmentModel >
virtual void SetAIF (mitk::AIFBasedModelBase::AterialInputFunctionType _arg)
 
virtual const mitk::AIFBasedModelBase::AterialInputFunctionTypeGetAIF ()
 
virtual void SetAIFTimeGrid (mitk::ModelBase::TimeGridType _arg)
 
virtual const mitk::ModelBase::TimeGridTypeGetAIFTimeGrid ()
 
StaticParameterMapType GetGlobalStaticParameters () const override
 
- Public Member Functions inherited from mitk::ConcreteModelParameterizerBase< mitk::OneTissueCompartmentModel >
StaticParameterMapType GetLocalStaticParameters (const IndexType &) const override
 
ModelBasePointer GenerateParameterizedModel (const IndexType &currentPosition) const override
 
ModelBasePointer GenerateParameterizedModel () const override
 
ParametersType GetDefaultInitialParameterization () const override
 
ParameterNamesType GetParameterNames () const override
 
ParametersSizeType GetNumberOfParameters () const override
 
ParamterScaleMapType GetParameterScales () const override
 
ParamterUnitMapType GetParameterUnits () const override
 
ParameterNamesType GetDerivedParameterNames () const override
 
ParametersSizeType GetNumberOfDerivedParameters () const override
 
DerivedParamterScaleMapType GetDerivedParameterScales () const override
 
DerivedParamterUnitMapType GetDerivedParameterUnits () const override
 
std::string GetModelDisplayName () const override
 
std::string GetModelType () const override
 
FunctionStringType GetFunctionString () const override
 
ModellClassIDType GetClassID () const override
 
std::string GetXName () const override
 
std::string GetXAxisName () const override
 
std::string GetXAxisUnit () const override
 
std::string GetYAxisName () const override
 
std::string GetYAxisUnit () const override
 
- Public Member Functions inherited from mitk::ModelParameterizerBase
ParametersType GetInitialParameterization () const
 
ParametersType GetInitialParameterization (const IndexType &currentPosition) const
 
void SetInitialParameterizationDelegate (const InitialParameterizationDelegateBase *delegate)
 
virtual void SetDefaultTimeGrid (TimeGridType _arg)
 
virtual const TimeGridTypeGetDefaultTimeGrid ()
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from mitk::ConcreteModelParameterizerBase< mitk::OneTissueCompartmentModel >
static Pointer New ()
 

Protected Member Functions

 OneTissueCompartmentModelParameterizer ()
 
 ~OneTissueCompartmentModelParameterizer () override
 
- Protected Member Functions inherited from mitk::AIFBasedModelParameterizerBase< mitk::OneTissueCompartmentModel >
 AIFBasedModelParameterizerBase ()
 
 ~AIFBasedModelParameterizerBase () override
 
- Protected Member Functions inherited from mitk::ConcreteModelParameterizerBase< mitk::OneTissueCompartmentModel >
 ConcreteModelParameterizerBase ()
 
 ~ConcreteModelParameterizerBase () override
 
- Protected Member Functions inherited from mitk::ModelParameterizerBase
 ModelParameterizerBase ()
 
 ~ModelParameterizerBase () override
 
- Protected Member Functions inherited from mitk::ModelTraitsInterface
 ModelTraitsInterface ()
 
virtual ~ModelTraitsInterface ()
 

Additional Inherited Members

- Protected Attributes inherited from mitk::AIFBasedModelParameterizerBase< mitk::OneTissueCompartmentModel >
mitk::AIFBasedModelBase::AterialInputFunctionType m_AIF
 
mitk::ModelBase::TimeGridType m_AIFTimeGrid
 
- Protected Attributes inherited from mitk::ModelParameterizerBase
InitialParameterizationDelegateBase::ConstPointer m_InitialDelegate
 
TimeGridType m_DefaultTimeGrid
 

Detailed Description

Definition at line 24 of file mitkOneTissueCompartmentModelParameterizer.h.

Member Typedef Documentation

◆ ConstPointer

◆ IndexType

◆ ModelBasePointer

◆ ModelBaseType

◆ ModelPointer

◆ ModelType

◆ Pointer

◆ Self

◆ StaticParameterMapType

◆ StaticParameterValuesType

typedef Superclass::StaticParameterValuesType mitk::OneTissueCompartmentModelParameterizer::StaticParameterValuesType

Definition at line 44 of file mitkOneTissueCompartmentModelParameterizer.h.

◆ StaticParameterValueType

◆ Superclass

Constructor & Destructor Documentation

◆ OneTissueCompartmentModelParameterizer()

mitk::OneTissueCompartmentModelParameterizer::OneTissueCompartmentModelParameterizer ( )
protected

◆ ~OneTissueCompartmentModelParameterizer()

mitk::OneTissueCompartmentModelParameterizer::~OneTissueCompartmentModelParameterizer ( )
overrideprotected

Member Function Documentation

◆ GetClassName()

virtual const char* mitk::OneTissueCompartmentModelParameterizer::GetClassName ( ) const
virtual

◆ GetDefaultInitialParameterization()

mitk::OneTissueCompartmentModelParameterizer::ParametersType mitk::OneTissueCompartmentModelParameterizer::GetDefaultInitialParameterization ( ) const
overridevirtual

This function returns the default parameterization (e.g. initial parametrization for fitting) defined by the model developer for for the given model.

Implements mitk::ModelParameterizerBase.

Definition at line 16 of file mitkOneTissueCompartmentModelParameterizer.cpp.

References mitk::OneTissueCompartmentModel::POSITION_PARAMETER_k1, and mitk::OneTissueCompartmentModel::POSITION_PARAMETER_k2.

◆ New()

static Pointer mitk::OneTissueCompartmentModelParameterizer::New ( )
static

The documentation for this class was generated from the following files: