mitkLabelSetImageConverter.h

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/*============================================================================
 
The Medical Imaging Interaction Toolkit (MITK)
 
Copyright (c) German Cancer Research Center (DKFZ)
All rights reserved.
 
Use of this source code is governed by a 3-clause BSD license that can be
found in the LICENSE file.
 
============================================================================*/
 
#ifndef mitkLabelSetImageConverter_h
#define mitkLabelSetImageConverter_h
 
#include <mitkLabelSetImage.h>
 
namespace mitk
{
  MITKMULTILABEL_EXPORT Image::Pointer ConvertLabelSetImageToImage(LabelSetImage::ConstPointer labelSetImage);
 
  MITKMULTILABEL_EXPORT LabelSetImage::Pointer ConvertImageToLabelSetImage(Image::Pointer image);
  MITKMULTILABEL_EXPORT LabelSetImage::Pointer ConvertImageVectorToLabelSetImage(const std::vector<mitk::Image::Pointer>& images, const TimeGeometry* timeGeometry);
 
  MITKMULTILABEL_EXPORT std::vector<mitk::Image::Pointer> SplitVectorImage(const Image* vecImage);
 
  MITKMULTILABEL_EXPORT LabelSetImage::LabelVectorType GenerateLabelSetWithMappedValues(const LabelSetImage::ConstLabelVectorType&, LabelValueMappingVector labelMapping);
 
  MITKMULTILABEL_EXPORT Image::Pointer ConvertImageToGroupImage(const Image* inputImage, mitk::LabelSetImage::LabelValueVectorType& foundLabels);
 
  MITKMULTILABEL_EXPORT bool CheckForLabelValueConflictsAndResolve(const mitk::LabelSetImage::LabelValueVectorType& newValues, mitk::LabelSetImage::LabelValueVectorType& usedLabelValues, mitk::LabelSetImage::LabelValueVectorType& correctedLabelValues);
 
  MITKMULTILABEL_EXPORT Image::Pointer CreateLabelMask(const LabelSetImage* segmentation, LabelSetImage::LabelValueType labelValue, bool createBinaryMap = true);
 
  using IDToLabelClassNameMapType = std::map<LabelSetImage::LabelValueType, std::string>;
  MITKMULTILABEL_EXPORT std::pair<Image::Pointer, IDToLabelClassNameMapType> CreateLabelClassMap(const LabelSetImage* segmentation, LabelSetImage::GroupIndexType groupID, const LabelSetImage::LabelValueVectorType& selectedLabels);
 
  MITKMULTILABEL_EXPORT std::pair<Image::Pointer, IDToLabelClassNameMapType> CreateLabelClassMap(const LabelSetImage* segmentation, LabelSetImage::GroupIndexType groupID);
 
}
 
#endif