#include <mitkSurfaceInterpolationController.h>

Inheritance diagram for mitk::SurfaceInterpolationController:

Collaboration diagram for mitk::SurfaceInterpolationController:

Classes
struct	ContourPositionInformation

Public Types
typedef std::vector< ContourPositionInformation >	CPIVector

Public Member Functions
	mitkClassMacroItkParent (SurfaceInterpolationController, itk::Object)

Pointer	Clone () const

void	AddNewContours (const std::vector< ContourPositionInformation > &newCPIs, bool reinitializeAction=false, bool silent=false)
	Adds new extracted contours to the list. If one or more contours at a given position already exist they will be updated respectively. More...

bool	RemoveContour (ContourPositionInformation contourInfo, bool keepPlaceholderForUndo=false)
	Removes the contour for a given plane for the current selected segmentation. More...

void	RemoveObservers ()

void	Interpolate (const MultiLabelSegmentation *segmentationImage, MultiLabelSegmentation::LabelValueType labelValue, TimeStepType timeStep)
	Performs the interpolation. More...

mitk::Surface::Pointer	GetInterpolationResult (const MultiLabelSegmentation *segmentationImage, MultiLabelSegmentation::LabelValueType labelValue, TimeStepType timeStep)
	Get the Result of the interpolation operation. More...

void	SetMinSpacing (double minSpacing)
	Sets the minimum spacing of the current selected segmentation This is needed since the contour points we reduced before they are used to interpolate the surface. More...

void	SetMaxSpacing (double maxSpacing)
	Sets the minimum spacing of the current selected segmentation This is needed since the contour points we reduced before they are used to interpolate the surface. More...

void	SetDistanceImageVolume (unsigned int distImageVolume)

mitk::MultiLabelSegmentation *	GetCurrentSegmentation ()
	Get the current selected segmentation for which the interpolation is performed. More...

void	SetDataStorage (DataStorage::Pointer ds)

void	SetCurrentInterpolationSession (MultiLabelSegmentation *currentSegmentationImage)

void	RemoveInterpolationSession (const MultiLabelSegmentation *segmentationImage)
	Remove interpolation session. More...

void	RemoveAllInterpolationSessions ()
	Removes all sessions. More...

CPIVector *	GetContours (MultiLabelSegmentation::LabelValueType labelValue, TimeStepType timeStep)
	Get the Contours at a certain timeStep and layerID. More...

std::vector< MultiLabelSegmentation::LabelValueType >	GetAffectedLabels (const MultiLabelSegmentation seg, TimeStepType timeStep, const PlaneGeometry plane) const

void	CompleteReinitialization (const std::vector< ContourPositionInformation > &newCPIs)
	Triggered with the "Reinit Interpolation" action. The contours are used to repopulate the. More...

void	RemoveContours (const MultiLabelSegmentation *segmentationImage, mitk::Label::PixelType label, TimeStepType timeStep)
	Removes contours of a particular label and at a given time step for the current session/segmentation. More...

void	RemoveContours (const MultiLabelSegmentation *segmentationImage, mitk::Label::PixelType label)
	Removes contours of a particular label and at a given time step for the current session/segmentation. More...

unsigned int	GetNumberOfInterpolationSessions ()

mitk::DataNode *	GetSegmentationImageNode () const
	Get the Segmentation Image Node object. More...

Static Public Member Functions
static Pointer	New ()

static SurfaceInterpolationController *	GetInstance ()

Protected Member Functions
	SurfaceInterpolationController ()

	~SurfaceInterpolationController () override

template<typename TPixel , unsigned int VImageDimension>
void	GetImageBase (itk::Image< TPixel, VImageDimension > *input, itk::ImageBase< 3 >::Pointer &result)

Detailed Description

Definition at line 30 of file mitkSurfaceInterpolationController.h.

Member Typedef Documentation

◆ CPIVector

typedef std::vector<ContourPositionInformation> mitk::SurfaceInterpolationController::CPIVector

Definition at line 69 of file mitkSurfaceInterpolationController.h.

Constructor & Destructor Documentation

◆ SurfaceInterpolationController()

mitk::SurfaceInterpolationController::SurfaceInterpolationController ( )

protected

◆ ~SurfaceInterpolationController()

mitk::SurfaceInterpolationController::~SurfaceInterpolationController ( )

overrideprotected

Member Function Documentation

◆ AddNewContours()

void mitk::SurfaceInterpolationController::AddNewContours	(	const std::vector< ContourPositionInformation > &	newCPIs,
		bool	reinitializeAction = `false`,
		bool	silent = `false`
	)

Adds new extracted contours to the list. If one or more contours at a given position already exist they will be updated respectively.

◆ Clone()

Pointer mitk::SurfaceInterpolationController::Clone ( ) const

◆ CompleteReinitialization()

void mitk::SurfaceInterpolationController::CompleteReinitialization ( const std::vector< ContourPositionInformation > & newCPIs )

Triggered with the "Reinit Interpolation" action. The contours are used to repopulate the.

Triggered with the "Reinit Interpolation" action. The contours are used to repopulate the surfaceInterpolator data structures so that interpolation can be performed after reloading data.

◆ GetAffectedLabels()

std::vector<MultiLabelSegmentation::LabelValueType> mitk::SurfaceInterpolationController::GetAffectedLabels	(	const MultiLabelSegmentation *	seg,
		TimeStepType	timeStep,
		const PlaneGeometry *	plane
	)		const

◆ GetContours()

CPIVector* mitk::SurfaceInterpolationController::GetContours	(	MultiLabelSegmentation::LabelValueType	labelValue,
		TimeStepType	timeStep
	)

Get the Contours at a certain timeStep and layerID.

Parameters

timeStep	Time Step from which to get the contours.
labelValue	label from which to get the contours.

Returns: std::vector<ContourPositionInformation> Returns contours.

◆ GetCurrentSegmentation()

mitk::MultiLabelSegmentation* mitk::SurfaceInterpolationController::GetCurrentSegmentation ( )

Get the current selected segmentation for which the interpolation is performed.

Returns: the current segmentation image

◆ GetImageBase()

template<typename TPixel , unsigned int VImageDimension>

void mitk::SurfaceInterpolationController::GetImageBase	(	itk::Image< TPixel, VImageDimension > *	input,
		itk::ImageBase< 3 >::Pointer &	result
	)

protected

◆ GetInstance()

static SurfaceInterpolationController* mitk::SurfaceInterpolationController::GetInstance ( )

static

◆ GetInterpolationResult()

mitk::Surface::Pointer mitk::SurfaceInterpolationController::GetInterpolationResult	(	const MultiLabelSegmentation *	segmentationImage,
		MultiLabelSegmentation::LabelValueType	labelValue,
		TimeStepType	timeStep
	)

Get the Result of the interpolation operation.

Returns: mitk::Surface::Pointer

◆ GetNumberOfInterpolationSessions()

unsigned int mitk::SurfaceInterpolationController::GetNumberOfInterpolationSessions ( )

◆ GetSegmentationImageNode()

mitk::DataNode* mitk::SurfaceInterpolationController::GetSegmentationImageNode ( ) const

Get the Segmentation Image Node object.

Returns: DataNode* returns the DataNode containing the segmentation image.

◆ Interpolate()

void mitk::SurfaceInterpolationController::Interpolate	(	const MultiLabelSegmentation *	segmentationImage,
		MultiLabelSegmentation::LabelValueType	labelValue,
		TimeStepType	timeStep
	)

Performs the interpolation.

◆ mitkClassMacroItkParent()

mitk::SurfaceInterpolationController::mitkClassMacroItkParent	(	SurfaceInterpolationController	,
		itk::Object
	)

◆ New()

static Pointer mitk::SurfaceInterpolationController::New ( )

static

◆ RemoveAllInterpolationSessions()

void mitk::SurfaceInterpolationController::RemoveAllInterpolationSessions ( )

Removes all sessions.

◆ RemoveContour()

bool mitk::SurfaceInterpolationController::RemoveContour	(	ContourPositionInformation	contourInfo,
		bool	keepPlaceholderForUndo = `false`
	)

Removes the contour for a given plane for the current selected segmentation.

Parameters

contourInfo	the contour which should be removed
keepPlaceholderForUndo

Returns: true if a contour was found and removed, false if no contour was found

◆ RemoveContours() [1/2]

void mitk::SurfaceInterpolationController::RemoveContours	(	const MultiLabelSegmentation *	segmentationImage,
		mitk::Label::PixelType	label
	)

Removes contours of a particular label and at a given time step for the current session/segmentation.

Parameters

segmentationImage
label	Label of contour to remove.

Remarks: if the label or time step does not exist, nothing happens.

◆ RemoveContours() [2/2]

void mitk::SurfaceInterpolationController::RemoveContours	(	const MultiLabelSegmentation *	segmentationImage,
		mitk::Label::PixelType	label,
		TimeStepType	timeStep
	)

Removes contours of a particular label and at a given time step for the current session/segmentation.

Parameters

segmentationImage
label	Label of contour to remove.
timeStep	Time step in which to remove the contours.

Remarks: if the label or time step does not exist, nothing happens.

◆ RemoveInterpolationSession()

void mitk::SurfaceInterpolationController::RemoveInterpolationSession ( const MultiLabelSegmentation * segmentationImage )

Remove interpolation session.

Parameters

segmentationImage the session to be removed

◆ RemoveObservers()

void mitk::SurfaceInterpolationController::RemoveObservers ( )

◆ SetCurrentInterpolationSession()

void mitk::SurfaceInterpolationController::SetCurrentInterpolationSession ( MultiLabelSegmentation * currentSegmentationImage )

Sets the current list of contourpoints which is used for the surface interpolation

Parameters

currentSegmentationImage The current selected segmentation

◆ SetDataStorage()

void mitk::SurfaceInterpolationController::SetDataStorage ( DataStorage::Pointer ds )

◆ SetDistanceImageVolume()

void mitk::SurfaceInterpolationController::SetDistanceImageVolume ( unsigned int distImageVolume )

Sets the volume i.e. the number of pixels that the distance image should have By evaluation we found out that 50.000 pixel delivers a good result

◆ SetMaxSpacing()

void mitk::SurfaceInterpolationController::SetMaxSpacing ( double maxSpacing )

Sets the minimum spacing of the current selected segmentation This is needed since the contour points we reduced before they are used to interpolate the surface.

Parameters

maxSpacing Set the max Spacing for interpolation

◆ SetMinSpacing()

void mitk::SurfaceInterpolationController::SetMinSpacing ( double minSpacing )

Sets the minimum spacing of the current selected segmentation This is needed since the contour points we reduced before they are used to interpolate the surface.

Parameters

minSpacing Parameter to set

The documentation for this class was generated from the following file:

mitkSurfaceInterpolationController.h

Classes

Public Types

Public Member Functions

Static Public Member Functions

Protected Member Functions

Detailed Description

Member Typedef Documentation

◆ CPIVector

Constructor & Destructor Documentation

◆ SurfaceInterpolationController()

◆ ~SurfaceInterpolationController()

Member Function Documentation

◆ AddNewContours()

◆ Clone()

◆ CompleteReinitialization()

◆ GetAffectedLabels()

◆ GetContours()

◆ GetCurrentSegmentation()

◆ GetImageBase()

◆ GetInstance()

◆ GetInterpolationResult()

◆ GetNumberOfInterpolationSessions()

◆ GetSegmentationImageNode()

◆ Interpolate()

◆ mitkClassMacroItkParent()

◆ New()

◆ RemoveAllInterpolationSessions()

◆ RemoveContour()

◆ RemoveContours() [1/2]

◆ RemoveContours() [2/2]

◆ RemoveInterpolationSession()

◆ RemoveObservers()

◆ SetCurrentInterpolationSession()

◆ SetDataStorage()

◆ SetDistanceImageVolume()

◆ SetMaxSpacing()

◆ SetMinSpacing()