#include <mitkSurfaceInterpolationController.h>

Inheritance diagram for mitk::SurfaceInterpolationController:

Collaboration diagram for mitk::SurfaceInterpolationController:

Classes
struct	ContourPositionInformation

Public Types
typedef std::vector< ContourPositionInformation >	ContourPositionInformationList

typedef std::vector< ContourPositionInformationList >	ContourPositionInformationVec2D

typedef std::map< mitk::Image *, ContourPositionInformationVec2D >	ContourListMap

Public Member Functions
	mitkClassMacroItkParent (SurfaceInterpolationController, itk::Object)

Pointer	Clone () const

virtual double	GetDistanceImageSpacing ()

void	SetCurrentTimePoint (TimePointType tp)

TimePointType	GetCurrentTimePoint () const

void	AddNewContour (Surface::Pointer newContour)
	Adds a new extracted contour to the list. More...

bool	RemoveContour (ContourPositionInformation contourInfo)
	Removes the contour for a given plane for the current selected segmenation. More...

void	AddNewContours (std::vector< Surface::Pointer > newContours)
	Adds new extracted contours to the list. If one or more contours at a given position already exist they will be updated respectively. More...

const mitk::Surface *	GetContour (ContourPositionInformation contourInfo)
	Returns the contour for a given plane for the current selected segmenation. More...

unsigned int	GetNumberOfContours ()
	Returns the number of available contours for the current selected segmentation. More...

void	Interpolate ()

mitk::Surface::Pointer	GetInterpolationResult ()

void	SetMinSpacing (double minSpacing)

void	SetMaxSpacing (double maxSpacing)

void	SetDistanceImageVolume (unsigned int distImageVolume)

mitk::Image::Pointer	GetCurrentSegmentation ()
	Get the current selected segmentation for which the interpolation is performed. More...

Surface *	GetContoursAsSurface ()

void	SetDataStorage (DataStorage::Pointer ds)

void	SetCurrentSegmentationInterpolationList (mitk::Image::Pointer segmentation)

void	SetCurrentInterpolationSession (mitk::Image::Pointer currentSegmentationImage)

void	RemoveSegmentationFromContourList (mitk::Image *segmentation)

void	RemoveInterpolationSession (mitk::Image::Pointer segmentationImage)
	Remove interpolation session. More...

bool	ReplaceInterpolationSession (mitk::Image::Pointer oldSession, mitk::Image::Pointer newSession)

void	RemoveAllInterpolationSessions ()
	Removes all sessions. More...

void	ReinitializeInterpolation (mitk::Surface::Pointer contours)
	Reinitializes the interpolation using the provided contour data. More...

mitk::Image *	GetImage ()

double	EstimatePortionOfNeededMemory ()

unsigned int	GetNumberOfInterpolationSessions ()

Static Public Member Functions
static Pointer	New ()

static SurfaceInterpolationController *	GetInstance ()

Protected Member Functions
	SurfaceInterpolationController ()

	~SurfaceInterpolationController () override

template<typename TPixel , unsigned int VImageDimension>
void	GetImageBase (itk::Image< TPixel, VImageDimension > *input, itk::ImageBase< 3 >::Pointer &result)

Detailed Description

Definition at line 48 of file mitkSurfaceInterpolationController.h.

Member Typedef Documentation

◆ ContourListMap

typedef std::map<mitk::Image *, ContourPositionInformationVec2D> mitk::SurfaceInterpolationController::ContourListMap

Definition at line 65 of file mitkSurfaceInterpolationController.h.

◆ ContourPositionInformationList

typedef std::vector<ContourPositionInformation> mitk::SurfaceInterpolationController::ContourPositionInformationList

Definition at line 63 of file mitkSurfaceInterpolationController.h.

◆ ContourPositionInformationVec2D

typedef std::vector<ContourPositionInformationList> mitk::SurfaceInterpolationController::ContourPositionInformationVec2D

Definition at line 64 of file mitkSurfaceInterpolationController.h.

Constructor & Destructor Documentation

◆ SurfaceInterpolationController()

mitk::SurfaceInterpolationController::SurfaceInterpolationController ( )

protected

◆ ~SurfaceInterpolationController()

mitk::SurfaceInterpolationController::~SurfaceInterpolationController ( )

overrideprotected

Member Function Documentation

◆ AddNewContour()

void mitk::SurfaceInterpolationController::AddNewContour ( Surface::Pointer newContour )

Adds a new extracted contour to the list.

Parameters

newContour the contour to be added. If a contour at that position already exists the related contour will be updated

◆ AddNewContours()

void mitk::SurfaceInterpolationController::AddNewContours ( std::vector< Surface::Pointer > newContours )

Adds new extracted contours to the list. If one or more contours at a given position already exist they will be updated respectively.

Parameters

newContours the list of the contours

◆ Clone()

Pointer mitk::SurfaceInterpolationController::Clone ( ) const

◆ EstimatePortionOfNeededMemory()

double mitk::SurfaceInterpolationController::EstimatePortionOfNeededMemory ( )

Estimates the memory which is needed to build up the equationsystem for the interpolation.

Returns: The percentage of the real memory which will be used by the interpolation

◆ GetContour()

const mitk::Surface* mitk::SurfaceInterpolationController::GetContour ( ContourPositionInformation contourInfo )

Returns the contour for a given plane for the current selected segmenation.

Parameters

contourInfo the contour which should be returned

Returns: the contour as an mitk::Surface. If no contour is available at the give position nullptr is returned

◆ GetContoursAsSurface()

Surface* mitk::SurfaceInterpolationController::GetContoursAsSurface ( )

◆ GetCurrentSegmentation()

mitk::Image::Pointer mitk::SurfaceInterpolationController::GetCurrentSegmentation ( )

Get the current selected segmentation for which the interpolation is performed.

Returns: the current segmentation image

◆ GetCurrentTimePoint()

TimePointType mitk::SurfaceInterpolationController::GetCurrentTimePoint ( ) const

inline

Definition at line 82 of file mitkSurfaceInterpolationController.h.

References DEPRECATED.

◆ GetDistanceImageSpacing()

virtual double mitk::SurfaceInterpolationController::GetDistanceImageSpacing ( )

virtual

◆ GetImage()

mitk::Image* mitk::SurfaceInterpolationController::GetImage ( )

◆ GetImageBase()

template<typename TPixel , unsigned int VImageDimension>

void mitk::SurfaceInterpolationController::GetImageBase	(	itk::Image< TPixel, VImageDimension > *	input,
		itk::ImageBase< 3 >::Pointer &	result
	)

protected

◆ GetInstance()

static SurfaceInterpolationController* mitk::SurfaceInterpolationController::GetInstance ( )

static

◆ GetInterpolationResult()

mitk::Surface::Pointer mitk::SurfaceInterpolationController::GetInterpolationResult ( )

◆ GetNumberOfContours()

unsigned int mitk::SurfaceInterpolationController::GetNumberOfContours ( )

Returns the number of available contours for the current selected segmentation.

Returns: the number of contours

◆ GetNumberOfInterpolationSessions()

unsigned int mitk::SurfaceInterpolationController::GetNumberOfInterpolationSessions ( )

◆ Interpolate()

void mitk::SurfaceInterpolationController::Interpolate ( )

Interpolates the 3D surface from the given extracted contours

◆ mitkClassMacroItkParent()

mitk::SurfaceInterpolationController::mitkClassMacroItkParent	(	SurfaceInterpolationController	,
		itk::Object
	)

◆ New()

static Pointer mitk::SurfaceInterpolationController::New ( )

static

◆ ReinitializeInterpolation()

void mitk::SurfaceInterpolationController::ReinitializeInterpolation ( mitk::Surface::Pointer contours )

Reinitializes the interpolation using the provided contour data.

Parameters

contours a mitk::Surface which contains the contours as polys in the vtkPolyData

◆ RemoveAllInterpolationSessions()

void mitk::SurfaceInterpolationController::RemoveAllInterpolationSessions ( )

Removes all sessions.

◆ RemoveContour()

bool mitk::SurfaceInterpolationController::RemoveContour ( ContourPositionInformation contourInfo )

Removes the contour for a given plane for the current selected segmenation.

Parameters

contourInfo the contour which should be removed

Returns: true if a contour was found and removed, false if no contour was found

◆ RemoveInterpolationSession()

void mitk::SurfaceInterpolationController::RemoveInterpolationSession ( mitk::Image::Pointer segmentationImage )

Remove interpolation session.

Parameters

segmentationImage the session to be removed

◆ RemoveSegmentationFromContourList()

void mitk::SurfaceInterpolationController::RemoveSegmentationFromContourList ( mitk::Image * segmentation )

Removes the segmentation and all its contours from the list

Parameters

segmentation The segmentation to be removed

Deprecated:: (as of 2014_03)

◆ ReplaceInterpolationSession()

bool mitk::SurfaceInterpolationController::ReplaceInterpolationSession	(	mitk::Image::Pointer	oldSession,
		mitk::Image::Pointer	newSession
	)

Replaces the current interpolation session with a new one. All contours form the old session will be applied to the new session. This only works if the two images have the geometry

Parameters

oldSession	the session which should be replaced
newSession	the new session which replaces the old one

Returns: true it the the replacement was successful, false if not (e.g. the image's geometry differs)

◆ SetCurrentInterpolationSession()

void mitk::SurfaceInterpolationController::SetCurrentInterpolationSession ( mitk::Image::Pointer currentSegmentationImage )

Sets the current list of contourpoints which is used for the surface interpolation

Parameters

currentSegmentationImage The current selected segmentation

◆ SetCurrentSegmentationInterpolationList()

void mitk::SurfaceInterpolationController::SetCurrentSegmentationInterpolationList ( mitk::Image::Pointer segmentation )

Sets the current list of contourpoints which is used for the surface interpolation

Parameters

segmentation The current selected segmentation

Deprecated:: (as of 2014_03)

◆ SetCurrentTimePoint()

void mitk::SurfaceInterpolationController::SetCurrentTimePoint ( TimePointType tp )

inline

Definition at line 69 of file mitkSurfaceInterpolationController.h.

◆ SetDataStorage()

void mitk::SurfaceInterpolationController::SetDataStorage ( DataStorage::Pointer ds )

◆ SetDistanceImageVolume()

void mitk::SurfaceInterpolationController::SetDistanceImageVolume ( unsigned int distImageVolume )

Sets the volume i.e. the number of pixels that the distance image should have By evaluation we found out that 50.000 pixel delivers a good result

◆ SetMaxSpacing()

void mitk::SurfaceInterpolationController::SetMaxSpacing ( double maxSpacing )

Sets the minimum spacing of the current selected segmentation This is needed since the contour points we reduced before they are used to interpolate the surface

◆ SetMinSpacing()

void mitk::SurfaceInterpolationController::SetMinSpacing ( double minSpacing )

Sets the minimum spacing of the current selected segmentation This is needed since the contour points we reduced before they are used to interpolate the surface

The documentation for this class was generated from the following file:

mitkSurfaceInterpolationController.h

Classes

Public Types

Public Member Functions

Static Public Member Functions

Protected Member Functions

Detailed Description

Member Typedef Documentation

◆ ContourListMap

◆ ContourPositionInformationList

◆ ContourPositionInformationVec2D

Constructor & Destructor Documentation

◆ SurfaceInterpolationController()

◆ ~SurfaceInterpolationController()

Member Function Documentation

◆ AddNewContour()

◆ AddNewContours()

◆ Clone()

◆ EstimatePortionOfNeededMemory()

◆ GetContour()

◆ GetContoursAsSurface()

◆ GetCurrentSegmentation()

◆ GetCurrentTimePoint()

◆ GetDistanceImageSpacing()

◆ GetImage()

◆ GetImageBase()

◆ GetInstance()

◆ GetInterpolationResult()

◆ GetNumberOfContours()

◆ GetNumberOfInterpolationSessions()

◆ Interpolate()

◆ mitkClassMacroItkParent()

◆ New()

◆ ReinitializeInterpolation()

◆ RemoveAllInterpolationSessions()

◆ RemoveContour()

◆ RemoveInterpolationSession()

◆ RemoveSegmentationFromContourList()

◆ ReplaceInterpolationSession()

◆ SetCurrentInterpolationSession()

◆ SetCurrentSegmentationInterpolationList()

◆ SetCurrentTimePoint()

◆ SetDataStorage()

◆ SetDistanceImageVolume()

◆ SetMaxSpacing()

◆ SetMinSpacing()