Medical Imaging Interaction Toolkit  2021.02.99-e55a5d2f
Medical Imaging Interaction Toolkit
mitk::BinaryThresholdBaseTool Class Reference

Base class for binary threshold tools. More...

#include <mitkBinaryThresholdBaseTool.h>

Inheritance diagram for mitk::BinaryThresholdBaseTool:
Collaboration diagram for mitk::BinaryThresholdBaseTool:

Public Member Functions

 mitkClassMacro (BinaryThresholdBaseTool, AutoSegmentationWithPreviewTool)
virtual void SetThresholdValues (double lower, double upper)
- Public Member Functions inherited from mitk::AutoSegmentationWithPreviewTool
 mitkClassMacro (AutoSegmentationWithPreviewTool, AutoSegmentationTool)
void Activated () override
 Called when the tool gets activated. More...
void Deactivated () override
 Called when the tool gets deactivated. More...
void ConfirmSegmentation ()
virtual void SetCreateAllTimeSteps (bool _arg)
virtual bool GetCreateAllTimeSteps ()
virtual void CreateAllTimeStepsOn ()
virtual void CreateAllTimeStepsOff ()
virtual void SetKeepActiveAfterAccept (bool _arg)
virtual bool GetKeepActiveAfterAccept ()
virtual void KeepActiveAfterAcceptOn ()
virtual void KeepActiveAfterAcceptOff ()
virtual void SetIsTimePointChangeAware (bool _arg)
virtual bool GetIsTimePointChangeAware ()
virtual void IsTimePointChangeAwareOn ()
virtual void IsTimePointChangeAwareOff ()
virtual void SetResetsToEmptyPreview (bool _arg)
virtual bool GetResetsToEmptyPreview ()
virtual void ResetsToEmptyPreviewOn ()
virtual void ResetsToEmptyPreviewOff ()
bool CanHandle (const BaseData *referenceData, const BaseData *workingData) const override
void UpdatePreview (bool ignoreLazyPreviewSetting=false)
bool IsUpdating () const
- Public Member Functions inherited from mitk::AutoSegmentationTool
 mitkClassMacro (AutoSegmentationTool, Tool)
void SetOverwriteExistingSegmentation (bool overwrite)
std::string GetCurrentSegmentationName ()
 Gets the name of the currently selected segmentation node. More...
virtual DataNodeGetTargetSegmentationNode () const
 Depending on the selected mode either returns the currently selected segmentation node or (if overwrite mode is false) creates a new one from the selected reference data. More...
- Public Member Functions inherited from mitk::Tool
 mitkClassMacro (Tool, EventStateMachine)
virtual const char ** GetXPM () const =0
 Returns an icon in the XPM format. More...
virtual std::string GetIconPath () const
 Returns the path of an icon. More...
virtual us::ModuleResource GetCursorIconResource () const
 Returns the path of a cursor icon. More...
virtual us::ModuleResource GetIconResource () const
 Returns the tool button icon of the tool wrapped by a usModuleResource. More...
virtual const char * GetName () const =0
 Returns the name of this tool. Make it short! More...
virtual void InitializeStateMachine ()
virtual itk::Object::Pointer GetGUI (const std::string &toolkitPrefix, const std::string &toolkitPostfix)
 Interface for GUI creation. More...
virtual NodePredicateBase::ConstPointer GetReferenceDataPreference () const
virtual NodePredicateBase::ConstPointer GetWorkingDataPreference () const
DataNode::Pointer CreateEmptySegmentationNode (const Image *original, const std::string &organName, const mitk::Color &color) const
DataNode::Pointer CreateSegmentationNode (Image *image, const std::string &organName, const mitk::Color &color) const
- Public Member Functions inherited from mitk::EventStateMachine
virtual std::vector< std::string > GetClassHierarchy () const override
virtual const char * GetClassName () const
bool LoadStateMachine (const std::string &filename, const us::Module *module=nullptr)
 Loads XML resource. More...
bool HandleEvent (InteractionEvent *event, DataNode *dataNode)
void EnableUndo (bool enable)
 Enables or disabled Undo. More...
void EnableInteraction (bool enable)
 Enables/disables the state machine. In un-enabled state it won't react to any events. More...
- Public Member Functions inherited from mitk::InteractionEventHandler
bool SetEventConfig (const std::string &filename, const us::Module *module=nullptr)
 Loads a configuration from an XML resource. More...
bool SetEventConfig (const EventConfig &config)
 Loads a configuration from an EventConfig object. More...
EventConfig GetEventConfig () const
 Returns the current configuration. More...
bool AddEventConfig (const std::string &filename, const us::Module *module=nullptr)
 This method extends the configuration. More...
bool AddEventConfig (const EventConfig &config)
 This method extends the configuration. The configuration from the EventConfig object is loaded and only the ones conflicting are replaced by the new one. This way several configurations can be combined. More...
- Public Member Functions inherited from mitk::InteractionEventObserver
 InteractionEventObserver ()
virtual ~InteractionEventObserver ()
void Disable ()
void Enable ()
bool IsEnabled () const

Public Attributes

Message3< double, double, bool > IntervalBordersChanged
Message2< mitk::ScalarType, mitk::ScalarTypeThresholdingValuesChanged
- Public Attributes inherited from mitk::Tool
Message GUIProcessEventsMessage
 To let GUI process new events (e.g. qApp->processEvents() ) More...
Message1< std::string > ErrorMessage
 To send error messages (to be shown by some GUI) More...
Message1< bool > CurrentlyBusy
 To send whether the tool is busy (to be shown by some GUI) More...
Message1< std::string > GeneralMessage
 To send general messages (to be shown by some GUI) More...

Protected Member Functions

 BinaryThresholdBaseTool ()
 ~BinaryThresholdBaseTool () override
virtual void SetLockedUpperThreshold (bool _arg)
virtual bool GetLockedUpperThreshold ()
virtual void LockedUpperThresholdOn ()
virtual void LockedUpperThresholdOff ()
virtual ScalarType GetSensibleMinimumThresholdValue ()
virtual ScalarType GetSensibleMaximumThresholdValue ()
void InitiateToolByInput () override
void DoUpdatePreview (const Image *inputAtTimeStep, const Image *oldSegAtTimeStep, Image *previewImage, TimeStepType timeStep) override
- Protected Member Functions inherited from mitk::AutoSegmentationWithPreviewTool
virtual void UpdatePrepare ()
virtual void UpdateCleanUp ()
 AutoSegmentationWithPreviewTool (bool lazyDynamicPreviews=false)
 AutoSegmentationWithPreviewTool (bool lazyDynamicPreviews, const char *interactorType, const us::Module *interactorModule=nullptr)
 ~AutoSegmentationWithPreviewTool () override
ImageGetPreviewSegmentation ()
DataNodeGetPreviewSegmentationNode ()
const ImageGetSegmentationInput () const
const ImageGetReferenceData () const
void ResetPreviewNode ()
TimePointType GetLastTimePointOfUpdate () const
virtual void SetWorkingPlaneGeometry (PlaneGeometry *_arg)
virtual const PlaneGeometryGetWorkingPlaneGeometry ()
- Protected Member Functions inherited from mitk::AutoSegmentationTool
 AutoSegmentationTool ()
 AutoSegmentationTool (const char *interactorType, const us::Module *interactorModule=nullptr)
 ~AutoSegmentationTool () override
const char * GetGroup () const override
 Name of a group. More...
void EnsureTargetSegmentationNodeInDataStorage () const
- Protected Member Functions inherited from mitk::Tool
virtual void SetToolManager (ToolManager *)
ToolManagerGetToolManager () const
mitk::DataStorageGetDataStorage () const
void ConnectActionsAndFunctions () override
 Tool (const char *, const us::Module *interactorModule=nullptr)
 ~Tool () override
void Notify (InteractionEvent *interactionEvent, bool isHandled) override
bool FilterEvents (InteractionEvent *, DataNode *) override
- Protected Member Functions inherited from mitk::EventStateMachine
 EventStateMachine ()
 ~EventStateMachine () override
void AddActionFunction (const std::string &action, TActionFunctor *functor)
void AddActionFunction (const std::string &action, const ActionFunctionDelegate &delegate)
void AddConditionFunction (const std::string &condition, const ConditionFunctionDelegate &delegate)
StateMachineStateGetCurrentState () const
void ResetToStartState ()
 ResetToStartState Reset state machine to it initial starting state. More...
virtual bool CheckCondition (const StateMachineCondition &condition, const InteractionEvent *interactionEvent)
virtual void ExecuteAction (StateMachineAction *action, InteractionEvent *interactionEvent)
void SetMouseCursor (const char *xpm[], int hotspotX, int hotspotY)
 Sets the specified mouse cursor. More...
void ResetMouseCursor ()
 Resets the mouse cursor (if modified by the SlicesCoordinator) to its original state. More...
StateMachineTransitionGetExecutableTransition (InteractionEvent *event)
 Returns the executable transition for the given event. More...
- Protected Member Functions inherited from mitk::InteractionEventHandler
 InteractionEventHandler ()
 ~InteractionEventHandler () override
PropertyList::Pointer GetAttributes () const
std::string MapToEventVariant (InteractionEvent *interactionEvent)
virtual void ConfigurationChanged ()

Additional Inherited Members

- Public Types inherited from mitk::Tool
typedef mitk::Label::PixelType DefaultSegmentationDataType
- Public Types inherited from mitk::EventStateMachine
typedef EventStateMachine Self
typedef InteractionEventHandler Superclass
typedef itk::SmartPointer< SelfPointer
typedef itk::SmartPointer< const SelfConstPointer
typedef std::map< std::string, TActionFunctor * > ActionFunctionsMapType
typedef itk::SmartPointer< StateMachineStateStateMachineStateType
- Public Types inherited from mitk::InteractionEventHandler
typedef InteractionEventHandler Self
typedef itk::Object Superclass
typedef itk::SmartPointer< SelfPointer
typedef itk::SmartPointer< const SelfConstPointer
- Static Public Member Functions inherited from mitk::EventStateMachine
static const char * GetStaticNameOfClass ()
- Static Public Member Functions inherited from mitk::InteractionEventHandler
static const char * GetStaticNameOfClass ()
- Protected Types inherited from mitk::EventStateMachine
typedef MessageAbstractDelegate2< StateMachineAction *, InteractionEvent *, void > ActionFunctionDelegate
typedef MessageAbstractDelegate1< const InteractionEvent *, bool > ConditionFunctionDelegate
- Static Protected Member Functions inherited from mitk::AutoSegmentationTool
static Image::ConstPointer GetImageByTimeStep (const Image *image, unsigned int timestep)
static Image::ConstPointer GetImageByTimePoint (const Image *image, TimePointType timePoint)
- Protected Attributes inherited from mitk::AutoSegmentationWithPreviewTool
mitk::ToolCommand::Pointer m_ProgressCommand
- Protected Attributes inherited from mitk::AutoSegmentationTool
bool m_OverwriteExistingSegmentation
- Protected Attributes inherited from mitk::Tool
std::string m_EventConfig
 Let subclasses change their event configuration. More...
- Protected Attributes inherited from mitk::EventStateMachine
bool m_IsActive
bool m_UndoEnabled

Detailed Description

Base class for binary threshold tools.

See also

Definition at line 33 of file mitkBinaryThresholdBaseTool.h.

Constructor & Destructor Documentation

◆ BinaryThresholdBaseTool()

mitk::BinaryThresholdBaseTool::BinaryThresholdBaseTool ( )

◆ ~BinaryThresholdBaseTool()

mitk::BinaryThresholdBaseTool::~BinaryThresholdBaseTool ( )

Member Function Documentation

◆ DoUpdatePreview()

void mitk::BinaryThresholdBaseTool::DoUpdatePreview ( const Image inputAtTimeStep,
const Image oldSegAtTimeStep,
Image previewImage,
TimeStepType  timeStep 

This function does the real work. Here the preview for a given input image should be computed and stored in the also passed preview image at the passed time step. It also provides the current/old segmentation at the time point, which can be used, if the preview depends on the the segmenation so far.

Implements mitk::AutoSegmentationWithPreviewTool.

◆ GetLockedUpperThreshold()

virtual bool mitk::BinaryThresholdBaseTool::GetLockedUpperThreshold ( )

◆ GetSensibleMaximumThresholdValue()

virtual ScalarType mitk::BinaryThresholdBaseTool::GetSensibleMaximumThresholdValue ( )

◆ GetSensibleMinimumThresholdValue()

virtual ScalarType mitk::BinaryThresholdBaseTool::GetSensibleMinimumThresholdValue ( )

◆ InitiateToolByInput()

void mitk::BinaryThresholdBaseTool::InitiateToolByInput ( )

Member is always called if GetSegmentationInput() has changed (e.g. because a new ROI was defined, or on activation) to give derived classes the posibility to initiate their state accordingly. Reimplement this function to implement special behavior.

Reimplemented from mitk::AutoSegmentationWithPreviewTool.

◆ LockedUpperThresholdOff()

virtual void mitk::BinaryThresholdBaseTool::LockedUpperThresholdOff ( )

◆ LockedUpperThresholdOn()

virtual void mitk::BinaryThresholdBaseTool::LockedUpperThresholdOn ( )

◆ mitkClassMacro()

mitk::BinaryThresholdBaseTool::mitkClassMacro ( BinaryThresholdBaseTool  ,

◆ SetLockedUpperThreshold()

virtual void mitk::BinaryThresholdBaseTool::SetLockedUpperThreshold ( bool  _arg)

◆ SetThresholdValues()

virtual void mitk::BinaryThresholdBaseTool::SetThresholdValues ( double  lower,
double  upper 

Member Data Documentation

◆ IntervalBordersChanged

Message3<double, double, bool> mitk::BinaryThresholdBaseTool::IntervalBordersChanged

Definition at line 36 of file mitkBinaryThresholdBaseTool.h.

◆ ThresholdingValuesChanged

Message2<mitk::ScalarType, mitk::ScalarType> mitk::BinaryThresholdBaseTool::ThresholdingValuesChanged

Definition at line 37 of file mitkBinaryThresholdBaseTool.h.

The documentation for this class was generated from the following file: