mitkLabelSetImageHelper.h

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/*============================================================================
 
The Medical Imaging Interaction Toolkit (MITK)
 
Copyright (c) German Cancer Research Center (DKFZ)
All rights reserved.
 
Use of this source code is governed by a 3-clause BSD license that can be
found in the LICENSE file.
 
============================================================================*/
 
#ifndef mitkLabelSetImageHelper_h
#define mitkLabelSetImageHelper_h
 
#include <MitkMultilabelExports.h>
 
#include <mitkDataNode.h>
#include <mitkLabelSetImage.h>
 
namespace mitk
{
  class DataStorage;
 
  namespace LabelSetImageHelper
  {
    MITKMULTILABEL_EXPORT mitk::DataNode::Pointer CreateEmptySegmentationNode(const std::string& segmentationName = std::string());
 
    MITKMULTILABEL_EXPORT mitk::DataNode::Pointer CreateNewSegmentationNode(const DataNode* referenceNode,
      const Image* initialSegmentationImage = nullptr, const std::string& segmentationName = std::string(),
      const DataStorage* dataStorage = nullptr);
 
    MITKMULTILABEL_EXPORT void SetupDerivedSegmentation(MultiLabelSegmentation* seg,
                                                        const Image* source);
 
    MITKMULTILABEL_EXPORT Label::Pointer CreateNewLabel(const MultiLabelSegmentation* labelSetImage, const std::string& namePrefix = "Label", bool hideIDIfUnique = false);
 
    MITKMULTILABEL_EXPORT mitk::Color SuggestNewLabelColor(const std::vector<mitk::Color>& usedColors);
 
    using GroupIDToLabelValueMapType = std::map<mitk::MultiLabelSegmentation::GroupIndexType, MultiLabelSegmentation::LabelValueVectorType>;
    MITKMULTILABEL_EXPORT GroupIDToLabelValueMapType SplitLabelValuesByGroup(const MultiLabelSegmentation* labelSetImage, const MultiLabelSegmentation::LabelValueVectorType& labelValues);
 
    using LabelClassNameToLabelValueMapType = std::map<std::string, MultiLabelSegmentation::LabelValueVectorType>;
    MITKMULTILABEL_EXPORT LabelClassNameToLabelValueMapType SplitLabelValuesByClassName(const MultiLabelSegmentation* labelSetImage, MultiLabelSegmentation::GroupIndexType groupID);
    MITKMULTILABEL_EXPORT LabelClassNameToLabelValueMapType SplitLabelValuesByClassName(const MultiLabelSegmentation* labelSetImage, MultiLabelSegmentation::GroupIndexType groupID, const MultiLabelSegmentation::LabelValueVectorType& labelValues);
 
    using SourceToTargetGroupIDToLabelValueMappingMapType = std::map<MultiLabelSegmentation::GroupIndexType, std::map<MultiLabelSegmentation::GroupIndexType, LabelValueMappingVector> >;
    MITKMULTILABEL_EXPORT SourceToTargetGroupIDToLabelValueMappingMapType SplitLabelValueMappingBySourceAndTargetGroup(const MultiLabelSegmentation* sourceSeg, const MultiLabelSegmentation* targetSeg, const LabelValueMappingVector& labelMapping);
 
    MITKMULTILABEL_EXPORT std::string CreateDisplayGroupName(const MultiLabelSegmentation* labelSetImage, MultiLabelSegmentation::GroupIndexType groupID);
 
    MITKMULTILABEL_EXPORT std::string CreateDisplayLabelName(const MultiLabelSegmentation* labelSetImage, const Label* label);
 
    MITKMULTILABEL_EXPORT std::string CreateHTMLLabelName(const Label* label, const MultiLabelSegmentation* segmentation = nullptr);
 
    MITKMULTILABEL_EXPORT std::string CreateHTMLLabelDetails(const mitk::Label* label, const MultiLabelSegmentation* segmentation = nullptr);
 
  } // namespace LabelSetImageHelper
} // namespace mitk
 
#endif