mitkImageMappingHelper.h

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/*============================================================================
 
The Medical Imaging Interaction Toolkit (MITK)
 
Copyright (c) German Cancer Research Center (DKFZ)
All rights reserved.
 
Use of this source code is governed by a 3-clause BSD license that can be
found in the LICENSE file.
 
============================================================================*/
 
 
#ifndef mitkImageMappingHelper_h
#define mitkImageMappingHelper_h
 
#include "mapImageMappingTask.h"
#include "mapRegistrationBase.h"
#include "mitkImage.h"
#include "mitkGeometry3D.h"
 
#include "mitkMAPRegistrationWrapper.h"
 
#include "MitkMatchPointRegistrationExports.h"
 
namespace mitk
{
  struct ImageMappingInterpolator
  {
    enum Type
    {
      UserDefined = 0, //< User may specify the interpolator to use
      NearestNeighbor = 1, //< use nearest neighbor
      Linear = 2, //< use linear
      BSpline_3 = 3, //< use a 3rd order spline
      WSinc_Hamming = 4, //< use a wsinc with hamming window
      WSinc_Welch = 5 //< use a wsinc with welch window
    };
  };
 
  namespace ImageMappingHelper
  {
    typedef ::map::core::RegistrationBase RegistrationType;
    typedef ::mitk::MAPRegistrationWrapper MITKRegistrationType;
 
    typedef ::mitk::BaseGeometry ResultImageGeometryType;
    typedef ::mitk::Image InputImageType;
    typedef ::mitk::Image ResultImageType;
 
    MITKMATCHPOINTREGISTRATION_EXPORT TimeGeometry::Pointer CreateResultTimeGeometry(const mitk::BaseData* input,
      const mitk::ImageMappingHelper::ResultImageGeometryType* resultGeometry);
 
 
    MITKMATCHPOINTREGISTRATION_EXPORT ResultImageType::Pointer map(const InputImageType* input, const RegistrationType* registration,
      bool throwOnOutOfInputAreaError = false, const double& paddingValue = 0,
      const ResultImageGeometryType* resultGeometry = nullptr,
      bool throwOnMappingError = true, const double& errorValue = 0, mitk::ImageMappingInterpolator::Type interpolatorType = mitk::ImageMappingInterpolator::Linear);
 
    MITKMATCHPOINTREGISTRATION_EXPORT ResultImageType::Pointer map(const InputImageType* input, const MITKRegistrationType* registration,
      bool throwOnOutOfInputAreaError = false, const double& paddingValue = 0,
      const ResultImageGeometryType* resultGeometry = nullptr,
      bool throwOnMappingError = true, const double& errorValue = 0, mitk::ImageMappingInterpolator::Type interpolatorType = mitk::ImageMappingInterpolator::Linear);
 
    MITKMATCHPOINTREGISTRATION_EXPORT ResultImageGeometryType::Pointer GenerateSuperSampledGeometry(const ResultImageGeometryType* inputGeometry,
      double xScaling, double yScaling, double zScaling);
 
    MITKMATCHPOINTREGISTRATION_EXPORT ResultImageType::Pointer refineGeometry(const InputImageType* input, const RegistrationType* registration, bool throwOnError = true);
    MITKMATCHPOINTREGISTRATION_EXPORT ResultImageType::Pointer refineGeometry(const InputImageType* input, const MITKRegistrationType* registration, bool throwOnError = true);
 
    MITKMATCHPOINTREGISTRATION_EXPORT bool canRefineGeometry(const RegistrationType* registration);
    MITKMATCHPOINTREGISTRATION_EXPORT bool canRefineGeometry(const MITKRegistrationType* registration);
 
  }
 
}
 
#endif