mitkGIFCooccurenceMatrix2.cpp File Reference

#include <mitkGIFCooccurenceMatrix2.h>
#include <mitkITKImageImport.h>
#include <mitkImageCast.h>
#include <mitkImageAccessByItk.h>
#include <itkEnhancedScalarImageToTextureFeaturesFilter.h>
#include <itkShapedNeighborhoodIterator.h>
#include <itkImageRegionConstIterator.h>
#include <sstream>
#include <cmath>

Go to the source code of this file.

Namespaces
	mitk
	DataCollection - Class to facilitate loading/accessing structured data.

Macros
#define	ADDFEATURE(a)
#define	CALCVARIANCE(a)

Functions
static void	MatrixFeaturesTo (mitk::CoocurenceMatrixFeatures features, std::string prefix, mitk::GIFCooccurenceMatrix2::FeatureListType &featureList)
static void	CalculateMeanAndStdDevFeatures (std::vector< mitk::CoocurenceMatrixFeatures > featureList, mitk::CoocurenceMatrixFeatures &meanFeature, mitk::CoocurenceMatrixFeatures &stdFeature)
static void	NormalizeMatrixFeature (mitk::CoocurenceMatrixFeatures &features, std::vcl_size_t number)
template<typename TPixel , unsigned int VImageDimension>
void	CalculateCoOcMatrix (itk::Image< TPixel, VImageDimension > *itkImage, itk::Image< unsigned short, VImageDimension > *mask, itk::Offset< VImageDimension > offset, int range, mitk::CoocurenceMatrixHolder &holder)
void	CalculateFeatures (mitk::CoocurenceMatrixHolder &holder, mitk::CoocurenceMatrixFeatures &results)
template<typename TPixel , unsigned int VImageDimension>
void	CalculateCoocurenceFeatures (itk::Image< TPixel, VImageDimension > *itkImage, mitk::Image::Pointer mask, mitk::GIFCooccurenceMatrix2::FeatureListType &featureList, mitk::GIFCooccurenceMatrix2::GIFCooccurenceMatrix2Configuration config)

Macro Definition Documentation

ADDFEATURE

#define ADDFEATURE

(

a

)

Referenced by CalculateMeanAndStdDevFeatures().

CALCVARIANCE

#define CALCVARIANCE

(

a

)

Referenced by CalculateMeanAndStdDevFeatures().

Function Documentation

CalculateCoOcMatrix()

template<typename TPixel , unsigned int VImageDimension>

void CalculateCoOcMatrix	(	itk::Image< TPixel, VImageDimension > *	itkImage,
		itk::Image< unsigned short, VImageDimension > *	mask,
		itk::Offset< VImageDimension >	offset,
		int	range,
		mitk::CoocurenceMatrixHolder &	holder
	)

Definition at line 168 of file mitkGIFCooccurenceMatrix2.cpp.

CalculateCoocurenceFeatures()

template<typename TPixel , unsigned int VImageDimension>

void CalculateCoocurenceFeatures	(	itk::Image< TPixel, VImageDimension > *	itkImage,
		mitk::Image::Pointer	mask,
		mitk::GIFCooccurenceMatrix2::FeatureListType &	featureList,
		mitk::GIFCooccurenceMatrix2::GIFCooccurenceMatrix2Configuration	config
	)

Definition at line 378 of file mitkGIFCooccurenceMatrix2.cpp.

References mitk::GIFCooccurenceMatrix2::GIFCooccurenceMatrix2Configuration::Bins, mitk::GIFCooccurenceMatrix::CalculateFeatures(), CalculateMeanAndStdDevFeatures(), mitk::CastToItkImage(), mitk::GIFCooccurenceMatrix2::GIFCooccurenceMatrix2Configuration::direction, MatrixFeaturesTo(), mitk::GIFCooccurenceMatrix2::GIFCooccurenceMatrix2Configuration::MaximumIntensity, mitk::GIFCooccurenceMatrix2::GIFCooccurenceMatrix2Configuration::MinimumIntensity, offset, mitk::GIFCooccurenceMatrix2::GIFCooccurenceMatrix2Configuration::prefix, and mitk::GIFCooccurenceMatrix2::GIFCooccurenceMatrix2Configuration::range.

Referenced by mitk::GIFCooccurenceMatrix2::CalculateFeatures().

CalculateFeatures()

void CalculateFeatures	(	mitk::CoocurenceMatrixHolder &	holder,
		mitk::CoocurenceMatrixFeatures &	results
	)

Definition at line 216 of file mitkGIFCooccurenceMatrix2.cpp.

References k().

Referenced by mitk::GIFIntensityVolumeHistogramFeatures::CalculateFeaturesUsingParameters(), mitk::GIFVolumetricDensityStatistics::CalculateFeaturesUsingParameters(), and mitk::GIFFirstOrderNumericStatistics::CalculateFeaturesUsingParameters().

CalculateMeanAndStdDevFeatures()

static void CalculateMeanAndStdDevFeatures ( std::vector< mitk::CoocurenceMatrixFeatures >  featureList, mitk::CoocurenceMatrixFeatures &  meanFeature, mitk::CoocurenceMatrixFeatures &  stdFeature  )

static

Definition at line 502 of file mitkGIFCooccurenceMatrix2.cpp.

References ADDFEATURE, CALCVARIANCE, and NormalizeMatrixFeature().

Referenced by CalculateCoocurenceFeatures().

MatrixFeaturesTo()

static void MatrixFeaturesTo ( mitk::CoocurenceMatrixFeatures  features, std::string  prefix, mitk::GIFCooccurenceMatrix2::FeatureListType &  featureList  )

static

Definition at line 464 of file mitkGIFCooccurenceMatrix2.cpp.

Referenced by CalculateCoocurenceFeatures().

NormalizeMatrixFeature()

static void NormalizeMatrixFeature ( mitk::CoocurenceMatrixFeatures &  features, std::vcl_size_t  number  )

static

Definition at line 585 of file mitkGIFCooccurenceMatrix2.cpp.

Referenced by CalculateMeanAndStdDevFeatures().