Writes a 2D slice into a 3D image. More...

#include <mitkOverwriteSliceImageFilter.h>

Inheritance diagram for mitk::OverwriteSliceImageFilter:

Collaboration diagram for mitk::OverwriteSliceImageFilter:

Public Member Functions
	mitkClassMacro (OverwriteSliceImageFilter, ImageToImageFilter)

Pointer	Clone () const

virtual void	SetSliceIndex (unsigned int _arg)
	Which slice to overwrite (first one has index 0). More...

virtual unsigned int	GetSliceIndex () const

virtual void	SetSliceDimension (unsigned int _arg)
	The orientation of the slice to overwrite. More...

virtual unsigned int	GetSliceDimension () const

virtual void	SetTimeStep (unsigned int _arg)
	Time step of the slice to overwrite. More...

virtual unsigned int	GetTimeStep () const

virtual void	SetCreateUndoInformation (bool _arg)
	Whether to create undo operation in the MITK undo stack. More...

virtual bool	GetCreateUndoInformation () const

virtual void	SetSliceImage (Image *_arg)

const Image *	GetSliceImage ()

const Image *	GetLastDifferenceImage ()

Public Member Functions inherited from mitk::ImageToImageFilter
virtual std::vector< std::string >	GetClassHierarchy () const override

virtual const char *	GetClassName () const

Pointer	Clone () const

virtual void	SetInput (const InputImageType *image)

virtual void	SetInput (unsigned int, const InputImageType *image)

InputImageType *	GetInput (void)

InputImageType *	GetInput (unsigned int idx)

const InputImageType *	GetInput (void) const

const InputImageType *	GetInput (unsigned int idx) const

Public Member Functions inherited from mitk::ImageSource
Pointer	Clone () const

OutputType *	GetOutput ()
	Get the output data of this image source object. More...

const OutputType *	GetOutput () const

OutputType *	GetOutput (DataObjectPointerArraySizeType idx)

const OutputType *	GetOutput (DataObjectPointerArraySizeType idx) const

virtual itk::DataObject::Pointer	MakeOutput (DataObjectPointerArraySizeType idx) override
	Make a DataObject of the correct type to used as the specified output. More...

virtual itk::DataObject::Pointer	MakeOutput (const DataObjectIdentifierType &name) override

virtual vtkImageData *	GetVtkImageData ()

virtual const vtkImageData *	GetVtkImageData () const

Public Member Functions inherited from mitk::BaseDataSource
OutputType *	GetOutput ()

const OutputType *	GetOutput () const

OutputType *	GetOutput (DataObjectPointerArraySizeType idx)

const OutputType *	GetOutput (DataObjectPointerArraySizeType idx) const

virtual void	GraftOutput (OutputType *output)
	Graft the specified BaseData onto this BaseDataSource's output. More...

virtual void	GraftOutput (const DataObjectIdentifierType &key, OutputType *output)

virtual void	GraftNthOutput (unsigned int idx, OutputType *output)
	Graft the specified base data object onto this BaseDataSource's idx'th output. More...

bool	Updating () const
	Access itk::ProcessObject::m_Updating. More...

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from mitk::ImageToImageFilter
static const char *	GetStaticNameOfClass ()

static Pointer	New ()

Static Public Member Functions inherited from mitk::ImageSource
static const char *	GetStaticNameOfClass ()

static Pointer	New ()
	Method for creation through the object factory. More...

Static Public Member Functions inherited from mitk::BaseDataSource
static const char *	GetStaticNameOfClass ()

Protected Member Functions
	OverwriteSliceImageFilter ()

virtual	~OverwriteSliceImageFilter ()

virtual void	GenerateData () override
	A version of GenerateData() specific for image processing filters. More...

template<typename TPixel , unsigned int VImageDimension>
void	ItkImageSwitch (itk::Image< TPixel, VImageDimension > *image)

template<typename TPixel1 , unsigned int VImageDimension1, typename TPixel2 , unsigned int VImageDimension2>
void	ItkImageProcessing (const itk::Image< TPixel1, VImageDimension1 > itkImage1, itk::Image< TPixel2, VImageDimension2 > itkImage2)

std::string	EventDescription (unsigned int sliceDimension, unsigned int sliceIndex, unsigned int timeStep)

Protected Member Functions inherited from mitk::ImageToImageFilter
	ImageToImageFilter ()

virtual	~ImageToImageFilter ()

virtual void	PrintSelf (std::ostream &os, itk::Indent indent) const override

virtual void	GenerateInputRequestedRegion () override

Protected Member Functions inherited from mitk::ImageSource
	ImageSource ()

virtual	~ImageSource ()

virtual void	ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, itk::ThreadIdType threadId)
	If an imaging filter can be implemented as a multithreaded algorithm, the filter will provide an implementation of ThreadedGenerateData(). More...

virtual void	PrepareOutputs () override
	This method is intentionally left blank. More...

virtual void	AllocateOutputs ()
	The GenerateData method normally allocates the buffers for all of the outputs of a filter. More...

virtual void	BeforeThreadedGenerateData ()
	If an imaging filter needs to perform processing after the buffer has been allocated but before threads are spawned, the filter can can provide an implementation for BeforeThreadedGenerateData(). More...

virtual void	AfterThreadedGenerateData ()
	If an imaging filter needs to perform processing after all processing threads have completed, the filter can can provide an implementation for AfterThreadedGenerateData(). More...

virtual unsigned int	SplitRequestedRegion (unsigned int i, unsigned int num, OutputImageRegionType &splitRegion)
	Split the output's RequestedRegion into "num" pieces, returning region "i" as "splitRegion". More...

Protected Member Functions inherited from mitk::BaseDataSource
	BaseDataSource ()

virtual	~BaseDataSource ()

Protected Attributes
Image::ConstPointer	m_SliceImage

Image::Pointer	m_SliceDifferenceImage

unsigned int	m_SliceIndex

unsigned int	m_SliceDimension

unsigned int	m_TimeStep

unsigned int	m_Dimension0

unsigned int	m_Dimension1

bool	m_CreateUndoInformation

Additional Inherited Members
Public Types inherited from mitk::ImageToImageFilter
typedef ImageToImageFilter	Self

typedef ImageSource	Superclass

typedef itk::SmartPointer< Self >	Pointer

typedef itk::SmartPointer< const Self >	ConstPointer

typedef Superclass::OutputImageRegionType	OutputImageRegionType

typedef mitk::Image	InputImageType

typedef InputImageType::Pointer	InputImagePointer

typedef InputImageType::ConstPointer	InputImageConstPointer

typedef SlicedData::RegionType	InputImageRegionType

Public Types inherited from mitk::ImageSource
typedef ImageSource	Self

typedef BaseDataSource	Superclass

typedef itk::SmartPointer< Self >	Pointer

typedef itk::SmartPointer< const Self >	ConstPointer

typedef mitk::Image	OutputImageType
	Some convenient typedefs. More...

typedef OutputImageType	OutputType

typedef OutputImageType::Pointer	OutputImagePointer

typedef SlicedData::RegionType	OutputImageRegionType

Public Types inherited from mitk::BaseDataSource
typedef BaseDataSource	Self

typedef itk::ProcessObject	Superclass

typedef itk::SmartPointer< Self >	Pointer

typedef itk::SmartPointer< const Self >	ConstPointer

typedef BaseData	OutputType

typedef itk::DataObject::DataObjectIdentifierType	DataObjectIdentifierType

Static Protected Member Functions inherited from mitk::ImageSource
static ITK_THREAD_RETURN_TYPE	ThreaderCallback (void *arg)
	Static function used as a "callback" by the MultiThreader. More...

Static Protected Member Functions inherited from mitk::BaseDataSource
static Pointer	New ()

Detailed Description

Writes a 2D slice into a 3D image.

Deprecated:

This class is deprecated. Use mitkVtkImageOverwrite instead.

See also: mitkVtkImageOverwrite

See also: SegTool2D; ContourTool; ExtractImageFilter

There is a separate page describing the general design of QmitkInteractiveSegmentation: QmitkInteractiveSegmentationTechnicalPage

This class takes a 3D mitk::Image as input and tries to replace one slice in it with the second input image, which is specified by calling SetSliceImage with a 2D mitk::Image.

Two parameters determine which slice is replaced: the "slice dimension" is that one, which is constant for all points in the plane, e.g. axial would mean 2. The "slice index" is the slice index in the image direction you specified with "affected dimension". Indices count from zero.

This class works with all kind of image types, the only restrictions being that the input is 3D, and the slice image is 2D.

If requested by SetCreateUndoInformation(true), this class will create instances of ApplyDiffImageOperation for the undo stack. These operations will (on user request) be executed by DiffImageApplier to perform undo.

Last contributor: $Author$

Definition at line 62 of file mitkOverwriteSliceImageFilter.h.

Constructor & Destructor Documentation

mitk::OverwriteSliceImageFilter::OverwriteSliceImageFilter ( )

protected

Definition at line 31 of file mitkOverwriteSliceImageFilter.cpp.

References MITK_WARN.

mitk::OverwriteSliceImageFilter::~OverwriteSliceImageFilter ( )

protectedvirtual

Definition at line 42 of file mitkOverwriteSliceImageFilter.cpp.

Member Function Documentation

Pointer mitk::OverwriteSliceImageFilter::Clone ( ) const

std::string mitk::OverwriteSliceImageFilter::EventDescription	(	unsigned int	sliceDimension,
		unsigned int	sliceIndex,
		unsigned int	timeStep
	)

protected

Definition at line 263 of file mitkOverwriteSliceImageFilter.cpp.

void mitk::OverwriteSliceImageFilter::GenerateData ( )

overrideprotectedvirtual

A version of GenerateData() specific for image processing filters.

This implementation will split the processing across multiple threads. The buffer is allocated by this method. Then the BeforeThreadedGenerateData() method is called (if provided). Then, a series of threads are spawned each calling ThreadedGenerateData(). After all the threads have completed processing, the AfterThreadedGenerateData() method is called (if provided). If an image processing filter cannot be threaded, the filter should provide an implementation of GenerateData(). That implementation is responsible for allocating the output buffer. If a filter an be threaded, it should NOT provide a GenerateData() method but should provide a ThreadedGenerateData() instead.

See also: ThreadedGenerateData()

Reimplemented from mitk::ImageSource.

Definition at line 46 of file mitkOverwriteSliceImageFilter.cpp.

References AccessFixedDimensionByItk, mitk::SegmentationInterpolationController::BlockModified(), mitk::UndoController::GetCurrentUndoModel(), mitk::ImageToImageFilter::GetInput(), mitk::DiffImageApplier::GetInstanceForUndo(), mitk::UndoStackItem::IncCurrObjectEventId(), mitk::SegmentationInterpolationController::InterpolatorForImage(), mitk::ImageTimeSelector::New(), mitk::Image::New(), mitk::OpTEST, mitk::SegmentationInterpolationController::SetChangedSlice(), and mitk::UndoModel::SetOperationEvent().

virtual bool mitk::OverwriteSliceImageFilter::GetCreateUndoInformation ( ) const

virtual

const Image* mitk::OverwriteSliceImageFilter::GetLastDifferenceImage ( )

inline

Definition at line 97 of file mitkOverwriteSliceImageFilter.h.

virtual unsigned int mitk::OverwriteSliceImageFilter::GetSliceDimension ( ) const

virtual

const Image* mitk::OverwriteSliceImageFilter::GetSliceImage ( )

inline

Definition at line 96 of file mitkOverwriteSliceImageFilter.h.

virtual unsigned int mitk::OverwriteSliceImageFilter::GetSliceIndex ( ) const

virtual

virtual unsigned int mitk::OverwriteSliceImageFilter::GetTimeStep ( ) const

virtual

template<typename TPixel1 , unsigned int VImageDimension1, typename TPixel2 , unsigned int VImageDimension2>

void mitk::OverwriteSliceImageFilter::ItkImageProcessing	(	const itk::Image< TPixel1, VImageDimension1 > *	itkImage1,
		itk::Image< TPixel2, VImageDimension2 > *	itkImage2
	)