| Classes related to the Segmentation plugin | A couple of classes related to the Segmentation plugin. See also Technical design of QmitkSegmentation |
| ▼MITK Modules | This group includes all MITK Modules |
| AlgorithmsExt | General purpose algorithms |
| ►Core | This category includes classes of the MITK Core module |
| Geometry Classes | This subcategory includes the geometry classes, which describe the geometry of the data in space and time |
| Micro Services Interfaces | Classes (interfaces) in this category are explicitely designed for usage with the MITK Micro Services |
| Data Classes | This subcategory includes the data classes, e.g., for images (mitk::Image), surfaces (mitk::Surface), vessel-trees (mitk::VesselTreeData), etc |
| IO Classes | This subcategory includes the IO classes to read or write data objects |
| Deprecated IO Classes | This subcategory includes the Deprecated IO classes to read or write data objects |
| Data Storage Classes | This subcategory includes the classes to store and retrieve objects from the mitk::DataStorage |
| ►Process and Adaptor Classes | This category includes process (algorithm) classes developed specifically for mitk and (mainly) adaptor classes for the integration of algorithms from other toolkits (currently vtk, itk) |
| Adaptor Classes | This subcategory includes adaptor classes for the integration of algorithms from other toolkits, especially ITK |
| Process Classes | This subcategory includes process (algorithm) classes developed specifically for mitk |
| ►Interaction and Undo Classes | This category includes classes that support the developer to create software that allows the user to interact with the data |
| Interaction Classes | This subcategory includes interaction classes (subclasses of mitk::StateMachine) that change the data according to the input of the user |
| Undo Classes | This subcategory includes the undo/redo-specific classes |
| ►Visualization and Visualization Organization Classes | This category includes renderwindows (currently one for OpenGL), renderers (currently only one, for OpenGL-based renderwindows), mappers and classes for navigating in the data |
| Mapper Classes | In the MITK rendering concept, Mappers are responsible for actually rendering data onto the screen |
| Navigation Control Classes | The classes in this category tell the render (subclass of mitk::BaseRenderer) which slice (subclass mitk::SliceNavigationController) or from which direction (subclass mitk::CameraController) it has to render |
| Renderer and RenderWindow Classes | The MITK rendering model resembles the mechisms found in VTK. This section describes the core components for coordinating rendering processes and render windows |
| DataTypesExt | MITK data types and related classes |
| The DICOMReader Module | DICOM This module contains a number of classes for DICOM image loading within MITK |
| IOExt | Reader, writer, and mapper extensions for MITK |
| LegacyIO | Legay reader and writer extensions for MITK |
| MapperExt | MITK mapper classes for data type extensions |
| PlanarFigure | Planar figure data types |
| QtWidgets | Basic Qt widgets and classes for MITK |
| MitkRDF | MITK RDF Library |
| ►RigidRegistration | A couple of classes related to registration |
| Classes related to rigid registration | A couple of classes related to rigid registration |
| Classes related to point based registration | A couple of classes related to point based registration |
| Micro Services Classes | This category includes classes related to the C++ Micro Services component |
| Utility Classes | This category includes utility classes which can be used by others |
| ▼BlueBerry Plugins | This group includes all BlueBerry Plugins |
| ►org.blueberry.core.commands | Provides an infrastructure for executing commands in the Workbench |
| Internal | This subcategory includes the internal classes of the org.blueberry.core.commands plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.blueberry.core.expressions | Evaluates complex expressions defined in XML |
| Internal | This subcategory includes the internal classes of the org.blueberry.core.expressions plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.blueberry.core.jobs | A generic jobs API for running background tasks in a BlueBerry application |
| Internal | This subcategory includes the internal classes of the org.blueberry.core.jobs plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.blueberry.core.runtime | Provides runtime services like preferences |
| Internal | This subcategory includes the internal classes of the org.blueberry.core.runtime plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.blueberry.test | Testing infrastructure for running unit tests defined in BlueBerry plug-ins |
| Internal | This subcategory includes the internal classes of the org.blueberry.test plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.blueberry.ui.qt | This is the user interface plugin. It provides a Qt based framework to build a BlueBerry workbench |
| Internal | This subcategory includes the internal classes of the org.blueberry.ui.qt plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.blueberry.ui.qt.help | Provides access to Qt Help information from inside the Workbench |
| Internal | This subcategory includes the internal classes of the org.blueberry.ui.qt.help plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.blueberry.ui.qt.log | Provides a Logging View for BlueBerry applications |
| Internal | This subcategory includes the internal classes of the org.blueberry.ui.qt.log plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.blueberry.ui.qt.objectinspector | A debugging plug-in providing a BlueBerry View for inspecting berry::Object instances and their associated smart-pointers |
| Internal | This subcategory includes the internal classes of the org.blueberry.ui.qt.objectinspector plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.blueberry.uitest | Testing infrastructure for executing unit tests which require a running workbench |
| Internal | This subcategory includes the internal classes of the org.blueberry.uitest plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ▼MITK Plugins | This group includes all MITK Plugins |
| ►org.mitk.gui.qt.stdmultiwidgeteditor | Contributes a QmitkStdMultiWidget based render window editor to the MITK Workbench |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.stdmultiwidgeteditor plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.core.ext | This small plug-in is responsible for initializing the MBI CoreExt module |
| Internal | This subcategory includes the internal classes of the org.mitk.core.ext plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.core.jobs | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.core.jobs plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.core.services | Provides basic MITK services |
| Internal | This subcategory includes the internal classes of the org.mitk.core.services plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.diffusionimaging | This small plug-in is responsible for initializing the mitkDiffusionImaging module |
| Internal | This subcategory includes the internal classes of the org.mitk.diffusionimaging plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.common | Provides common interfaces and utility classes for MITK Worbkench Views and Editors |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.common plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| org.mitk.gui.qt.surfaceregistration | Describe your plugin here |
| ►org.mitk.gui.qt.application | Provides utility classes for MITK application developers |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.application plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.basicimageprocessing | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.basicimageprocessing plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.classificationsegmentation | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.classificationsegmentation plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.cmdlinemodules | This plugin, provided by University College London (UCL), written by Matt Clarkson (m.cla.nosp@m.rkso.nosp@m.n@ucl.nosp@m..ac..nosp@m.uk) uses the CTK (http://www.commontk.org) Command Line Modules library to run command line programs as an external process |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.cmdlinemodules plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.common | Provides Qt GUI specific utility classes for MITK View and Editor developers |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.common plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.common.legacy | Provides legacy classes and functionality common for MITK plug-ins |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.common.legacy plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.coreapplication | The CoreApp applictaion plug-in |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.coreapplication plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.datamanager | This is the datamanager plugin. It provides means to query mitk::DataStorage objects and to change properties of the contained nodes |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.datamanager plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.datamanagerlight | This is the datamanagerlight plugin. It provides means to query mitk::DataStorage objects and to change properties of the contained nodes |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.datamanagerlight plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.dicom Plugin | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.dicom plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.dicominspector | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.dicominspector plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.diffusionimaging | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.diffusionimaging plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.diffusionimagingapp | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.diffusionimagingapp plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.eventrecorder | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.eventrecorder plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.ext | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.ext plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.mitkworkbench | This plug-in is responsible for initializing the MITK Workbench |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.mitkworkbench plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.geometrytools | A plugin to modify geometry of mitkBaseData via interaction. Currently, the following operations can be performed: |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.geometrytools plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mbi.gui.qt.usnavigation | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mbi.gui.qt.usnavigation plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.igtexamples | QmitkIGTExamples shows a small typically navigation MITK functionality |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.igtexamples plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.igttracking | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.igttracking plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.imagecropper | This is the image cropper plugin. It can crop images |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.imagecropper plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.imagenavigator | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.imagenavigator plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| org.mitk.gui.qt.registration.evaluator | Describe your plugin here |
| ►de.dkfz.matchpoint.mitk | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the de.dkfz.matchpoint.mitk plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| org.mitk.gui.qt.mapper | Describe your plugin here |
| org.mitk.gui.qt.mapper | Describe your plugin here |
| ►org.mitk.gui.qt.materialeditor | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.materialeditor plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.measurementtoolbox | This is the measurementtoolbox plugin |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.measurementtoolbox plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.igtlplugin | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.igtlplugin plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.overlaymanager | This is the overlaymanager plugin. Overlays that have been addded to the OverlayManager can be viewed and modified. The plugin also allows to add new overlays |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.overlaymanager plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.pointsetinteraction | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.pointsetinteraction plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.pointsetinteractionmultispectrum | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.pointsetinteractionmultispectrum plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.spectrocamrecorder | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.spectrocamrecorder plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.toftutorial | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.toftutorial plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.tofutil | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.tofutil plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.ugvisualization | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.ugvisualization plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.ultrasound | A plugin that manages and views images from ultrasound devices |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.ultrasound plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.viewnavigator | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.viewnavigator plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.volumevisualization | This is the volume visualization plugin |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.volumevisualization plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.gui.qt.xnat | This plug-in is a new possibility of communication with a XNAT server in MITK. It takes data from the server, shows it as hierarchy in the main window of the plug-in as editor and it works like a normal browser. There is also a view, where the XNAT hierarchy is displayed as tree structure. Editor and view can communicate with each other, so the editor updates for a selection in the view. The session data must be written in Preferences -> XNAT Session |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.xnat plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.planarfigure | This small plug-in is responsible for initializing the PlanarFigure module |
| Internal | This subcategory includes the internal classes of the org.mitk.planarfigure plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ▼MITK Example Plugins | This group includes all MITK example plugins demonstrating specific framework features |
| ►org.mitk.example.gui.customviewer | The custom viewer plug-in implements simple viewer functionality presented in a customized look and feel. It was developed to demonstrate extensibility and customizability of the BlueBerry application framework |
| Internal | This subcategory includes the internal classes of the org.mitk.example.gui.customviewer plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.example.gui.customviewer.views | Contributes BlueBerry Views for the code example A highly customized viewer |
| Internal | This subcategory includes the internal classes of the org.mitk.example.gui.customviewer.views plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.example.gui.extensionpointcontribution | A minimal applictaion that contributes an extension to an extension point |
| Internal | This subcategory includes the internal classes of the org.mitk.example.gui.extensionpointcontribution plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.example.gui.extensionpointdefinition | A minimal applictaion that definines an extension point and collects extensions |
| Internal | This subcategory includes the internal classes of the org.mitk.example.gui.extensionpointdefinition plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.example.gui.imaging | Example plug-in demonstrating various imaging related techniques |
| Internal | This subcategory includes the internal classes of the org.mitk.example.gui.imaging plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.example.gui.minimalapplication | A minimal applictaion plug-in |
| Internal | This subcategory includes the internal classes of the org.mitk.example.gui.minimalapplication plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.example.gui.multipleperspectives | An example application plug-in with multiple perspectives |
| Internal | This subcategory includes the internal classes of the org.mitk.example.gui.multipleperspectives plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.example.gui.opencv | An example plug-in showing how to play a video using OpenCV |
| Internal | This subcategory includes the internal classes of the org.mitk.example.gui.opencv plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.example.gui.regiongrowing | Describe your plugin here |
| Internal | This subcategory includes the internal classes of the org.mitk.example.gui.regiongrowing plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.example.gui.selectionservicemitk | An example application plug-in with a minimal selection service based on MITK elements |
| Internal | This subcategory includes the internal classes of the org.mitk.example.gui.selectionservicemitk plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.example.gui.selectionservicemitk.views | Contributes Views for the BlueBerry example MITK DataNode Selections |
| Internal | This subcategory includes the internal classes of the org.mitk.example.gui.selectionservicemitk.views plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| ►org.mitk.example.gui.selectionserviceqt | An example application plug-in with a minimal selection service based on QT elements |
| Internal | This subcategory includes the internal classes of the org.mitk.example.gui.selectionserviceqt plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| MITK Testing | In this group, the API documentation of methods useful for testing is collected. The more general concepts of testing in MITK are described on the General: Tests in MITK page |
| Deprecated | |
| ContourModel | |
| CMake Functions | This category includes CMake utility functions for external projects |
| mitkImageStatisticsHotspotTest | |
| Internal | This subcategory includes the internal classes of the org.mitk.gui.qt.aicpregistration plugin. Other plugins must not rely on these classes. They contain implementation details and their interface may change at any time. We mean it |
| Geometry | Organizes geometries over arbitrary defined time steps |
1.8.9.1 
