mitkPointSetStatisticsCalculator.h

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/*============================================================================
 
The Medical Imaging Interaction Toolkit (MITK)
 
Copyright (c) German Cancer Research Center (DKFZ)
All rights reserved.
 
Use of this source code is governed by a 3-clause BSD license that can be
found in the LICENSE file.
 
============================================================================*/
 
 
#ifndef mitkPointSetStatisticsCalculator_h
#define mitkPointSetStatisticsCalculator_h
 
#include <itkObject.h>
#include <MitkImageStatisticsExports.h>
#include <mitkPointSet.h>
 
namespace mitk
{
 
class MITKIMAGESTATISTICS_EXPORT PointSetStatisticsCalculator : public itk::Object
{
public:
 
  mitkClassMacroItkParent( PointSetStatisticsCalculator, itk::Object );
  itkFactorylessNewMacro(Self);
  itkCloneMacro(Self);
 
  mitkNewMacro1Param(PointSetStatisticsCalculator,mitk::PointSet::Pointer);
 
  void SetPointSet(mitk::PointSet::Pointer pSet);
 
  mitk::Point3D GetPositionMean();
 
  mitk::Vector3D GetPositionStandardDeviation();
 
  mitk::Vector3D GetPositionSampleStandardDeviation();
 
  double GetPositionErrorMean();
 
  double GetPositionErrorStandardDeviation();
 
  double GetPositionErrorSampleStandardDeviation();
 
  double GetPositionErrorRMS();
 
  double GetPositionErrorMedian();
 
  double GetPositionErrorMax();
 
  double GetPositionErrorMin();
 
  //#####################################################################################################
 
  //this both methods are used by another class an so they are public... perhaps we want to move them
  //out of this class because they have nothing to do with point sets.
 
  double GetStabw(std::vector<double> list);
 
  double GetSampleStabw(std::vector<double> list);
 
  //#####################################################################################################
 
 
protected:
 
  PointSetStatisticsCalculator();
  explicit PointSetStatisticsCalculator(mitk::PointSet::Pointer);
  ~PointSetStatisticsCalculator() override;
 
  // TODO: Remove the std::vector<mitk::Point3D> data structure and use mitk::PointSet everywhere
 
  std::vector<double> GetErrorList(std::vector<mitk::Point3D> list);
 
  mitk::Point3D GetMean(std::vector<mitk::Point3D> list);
 
  std::vector<mitk::Point3D> PointSetToVector(mitk::PointSet::Pointer pSet);
 
  bool CheckIfAllPositionsAreEqual();
 
  mitk::PointSet::Pointer m_PointSet;
 
  double GetMean(std::vector<double> list);
 
  double GetMedian(std::vector<double> list);
 
  double GetMax(std::vector<double> list);
 
  double GetMin(std::vector<double> list);
 
};
 
}
 
#endif