mitkCESTImageNormalizationFilter.h

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/*============================================================================
 
The Medical Imaging Interaction Toolkit (MITK)
 
Copyright (c) German Cancer Research Center (DKFZ)
All rights reserved.
 
Use of this source code is governed by a 3-clause BSD license that can be
found in the LICENSE file.
 
============================================================================*/
#ifndef mitkCESTImageNormalizationFilter_h
#define mitkCESTImageNormalizationFilter_h
 
#include <MitkCESTExports.h>
 
// MITK
#include "mitkImageToImageFilter.h"
 
namespace mitk
{
  class MITKCEST_EXPORT CESTImageNormalizationFilter : public ImageToImageFilter
  {
  public:
    mitkClassMacro(CESTImageNormalizationFilter, ImageToImageFilter);
    itkFactorylessNewMacro(Self);
    itkCloneMacro(Self);
 
  protected:
    CESTImageNormalizationFilter();
    ~CESTImageNormalizationFilter() override;
    void GenerateOutputInformation() override;
    void GenerateData() override;
 
    template <typename TPixel, unsigned int VImageDimension>
    void NormalizeTimeSteps(const itk::Image<TPixel, VImageDimension>* image);
 
    std::string m_RealOffsets;
 
    std::vector< unsigned int > m_NonM0Indices;
 
  };
 
  MITKCEST_EXPORT bool IsNotNormalizedCESTImage(const Image* cestImage);
 
} // END mitk namespace
 
#endif