mitkGIFGreyLevelDistanceZone.cpp File Reference

#include <mitkGIFGreyLevelDistanceZone.h>
#include <mitkITKImageImport.h>
#include <mitkImageCast.h>
#include <mitkImageAccessByItk.h>
#include <mitkIOUtil.h>
#include <itkMinimumMaximumImageCalculator.h>
#include <itkImageRegionIteratorWithIndex.h>
#include <itkBinaryCrossStructuringElement.h>
#include <itkBinaryErodeImageFilter.h>
#include <itkAddImageFilter.h>

Go to the source code of this file.

Namespaces
	mitk
	DataCollection - Class to facilitate loading/accessing structured data.

Functions
static void	MatrixFeaturesTo (mitk::GreyLevelDistanceZoneFeatures features, std::string prefix, mitk::GIFGreyLevelDistanceZone::FeatureListType &featureList)
template<typename TPixel , unsigned int VImageDimension>
int	CalculateGlSZMatrix (itk::Image< TPixel, VImageDimension > *itkImage, itk::Image< unsigned short, VImageDimension > *mask, itk::Image< unsigned short, VImageDimension > *distanceImage, std::vector< itk::Offset< VImageDimension > > offsets, bool estimateLargestRegion, mitk::GreyLevelDistanceZoneMatrixHolder &holder)
template<typename TPixel , unsigned int VDimension>
void	itkErode2 (itk::Image< TPixel, VDimension > *sourceImage, mitk::Image::Pointer &resultImage, int &maxDistance)
void	erode (mitk::Image::Pointer input, mitk::Image::Pointer &output, int &maxDistance)
void	erodeAndAdd (mitk::Image::Pointer input, mitk::Image::Pointer &finalOutput, int &maxDistance)
static void	CalculateFeatures (mitk::GreyLevelDistanceZoneMatrixHolder &holder, mitk::GreyLevelDistanceZoneFeatures &results)
template<typename TPixel , unsigned int VImageDimension>
static void	CalculateGreyLevelDistanceZoneFeatures (itk::Image< TPixel, VImageDimension > *itkImage, mitk::Image::Pointer mask, mitk::GIFGreyLevelDistanceZone::FeatureListType &featureList, mitk::GIFGreyLevelDistanceZone::GIFGreyLevelDistanceZoneConfiguration config)

Function Documentation

CalculateFeatures()

static void CalculateFeatures ( mitk::GreyLevelDistanceZoneMatrixHolder &  holder, mitk::GreyLevelDistanceZoneFeatures &  results  )

static

Definition at line 235 of file mitkGIFGreyLevelDistanceZone.cpp.

References mitk::GreyLevelDistanceZoneFeatures::GreyLevelMean, mitk::GreyLevelDistanceZoneFeatures::GreyLevelNonUniformity, mitk::GreyLevelDistanceZoneFeatures::GreyLevelNonUniformityNormalized, mitk::GreyLevelDistanceZoneFeatures::GreyLevelVariance, mitk::GreyLevelDistanceZoneFeatures::HighGreyLevelEmphasis, mitk::GreyLevelDistanceZoneFeatures::LargeDistanceEmphasis, mitk::GreyLevelDistanceZoneFeatures::LargeDistanceHighGreyLevelEmphasis, mitk::GreyLevelDistanceZoneFeatures::LargeDistanceLowGreyLevelEmphasis, mitk::GreyLevelDistanceZoneFeatures::LowGreyLevelEmphasis, mitk::GreyLevelDistanceZoneFeatures::SmallDistanceEmphasis, mitk::GreyLevelDistanceZoneFeatures::SmallDistanceHighGreyLevelEmphasis, mitk::GreyLevelDistanceZoneFeatures::SmallDistanceLowGreyLevelEmphasis, mitk::GreyLevelDistanceZoneFeatures::ZoneDistanceEntropy, mitk::GreyLevelDistanceZoneFeatures::ZoneDistanceMean, mitk::GreyLevelDistanceZoneFeatures::ZoneDistanceNoneUniformityNormalized, mitk::GreyLevelDistanceZoneFeatures::ZoneDistanceNonUniformity, mitk::GreyLevelDistanceZoneFeatures::ZoneDistanceVariance, and mitk::GreyLevelDistanceZoneFeatures::ZonePercentage.

CalculateGlSZMatrix()

template<typename TPixel , unsigned int VImageDimension>

int CalculateGlSZMatrix	(	itk::Image< TPixel, VImageDimension > *	itkImage,
		itk::Image< unsigned short, VImageDimension > *	mask,
		itk::Image< unsigned short, VImageDimension > *	distanceImage,
		std::vector< itk::Offset< VImageDimension > >	offsets,
		bool	estimateLargestRegion,
		mitk::GreyLevelDistanceZoneMatrixHolder &	holder
	)

Definition at line 71 of file mitkGIFGreyLevelDistanceZone.cpp.

References offset.

CalculateGreyLevelDistanceZoneFeatures()

template<typename TPixel , unsigned int VImageDimension>

static void CalculateGreyLevelDistanceZoneFeatures ( itk::Image< TPixel, VImageDimension > *  itkImage, mitk::Image::Pointer  mask, mitk::GIFGreyLevelDistanceZone::FeatureListType &  featureList, mitk::GIFGreyLevelDistanceZone::GIFGreyLevelDistanceZoneConfiguration  config  )

static

Definition at line 324 of file mitkGIFGreyLevelDistanceZone.cpp.

References mitk::GIFGreyLevelDistanceZone::GIFGreyLevelDistanceZoneConfiguration::Bins, mitk::GIFFirstOrderStatistics::CalculateFeatures(), mitk::CastToItkImage(), mitk::GIFGreyLevelDistanceZone::GIFGreyLevelDistanceZoneConfiguration::direction, mitk::GIFGreyLevelDistanceZone::GIFGreyLevelDistanceZoneConfiguration::distanceMask, erodeAndAdd(), MatrixFeaturesTo(), MITK_INFO, mitk::Image::New(), offset, mitk::GIFGreyLevelDistanceZone::GIFGreyLevelDistanceZoneConfiguration::prefix, and mitk::GIFGreyLevelDistanceZone::GIFGreyLevelDistanceZoneConfiguration::Quantifier.

Referenced by mitk::GIFGreyLevelDistanceZone::CalculateFeatures().

erode()

void erode	(	mitk::Image::Pointer	input,
		mitk::Image::Pointer &	output,
		int &	maxDistance
	)

Definition at line 222 of file mitkGIFGreyLevelDistanceZone.cpp.

References AccessByItk_2, and itkErode2().

Referenced by erodeAndAdd().

erodeAndAdd()

void erodeAndAdd	(	mitk::Image::Pointer	input,
		mitk::Image::Pointer &	finalOutput,
		int &	maxDistance
	)

Definition at line 228 of file mitkGIFGreyLevelDistanceZone.cpp.

References erode().

Referenced by CalculateGreyLevelDistanceZoneFeatures().

itkErode2()

template<typename TPixel , unsigned int VDimension>

void itkErode2	(	itk::Image< TPixel, VDimension > *	sourceImage,
		mitk::Image::Pointer &	resultImage,
		int &	maxDistance
	)

Definition at line 160 of file mitkGIFGreyLevelDistanceZone.cpp.

References mitk::CastToMitkImage(), and max().

Referenced by erode().

MatrixFeaturesTo()

static void MatrixFeaturesTo ( mitk::GreyLevelDistanceZoneFeatures  features, std::string  prefix, mitk::GIFGreyLevelDistanceZone::FeatureListType &  featureList  )

static

Definition at line 383 of file mitkGIFGreyLevelDistanceZone.cpp.

References mitk::GreyLevelDistanceZoneFeatures::GreyLevelMean, mitk::GreyLevelDistanceZoneFeatures::GreyLevelNonUniformity, mitk::GreyLevelDistanceZoneFeatures::GreyLevelNonUniformityNormalized, mitk::GreyLevelDistanceZoneFeatures::GreyLevelVariance, mitk::GreyLevelDistanceZoneFeatures::HighGreyLevelEmphasis, mitk::GreyLevelDistanceZoneFeatures::LargeDistanceEmphasis, mitk::GreyLevelDistanceZoneFeatures::LargeDistanceHighGreyLevelEmphasis, mitk::GreyLevelDistanceZoneFeatures::LargeDistanceLowGreyLevelEmphasis, mitk::GreyLevelDistanceZoneFeatures::LowGreyLevelEmphasis, mitk::GreyLevelDistanceZoneFeatures::SmallDistanceEmphasis, mitk::GreyLevelDistanceZoneFeatures::SmallDistanceHighGreyLevelEmphasis, mitk::GreyLevelDistanceZoneFeatures::SmallDistanceLowGreyLevelEmphasis, mitk::GreyLevelDistanceZoneFeatures::ZoneDistanceEntropy, mitk::GreyLevelDistanceZoneFeatures::ZoneDistanceMean, mitk::GreyLevelDistanceZoneFeatures::ZoneDistanceNoneUniformityNormalized, mitk::GreyLevelDistanceZoneFeatures::ZoneDistanceNonUniformity, mitk::GreyLevelDistanceZoneFeatures::ZoneDistanceVariance, and mitk::GreyLevelDistanceZoneFeatures::ZonePercentage.

Referenced by CalculateGreyLevelDistanceZoneFeatures().