Medical Imaging Interaction Toolkit  2024.06.99-5f7b36e7
Medical Imaging Interaction Toolkit
mitkDescriptivePharmacokineticBrixModelParameterizer.h
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1 /*============================================================================
2 
3 The Medical Imaging Interaction Toolkit (MITK)
4 
5 Copyright (c) German Cancer Research Center (DKFZ)
6 All rights reserved.
7 
8 Use of this source code is governed by a 3-clause BSD license that can be
9 found in the LICENSE file.
10 
11 ============================================================================*/
12 
13 #ifndef mitkDescriptivePharmacokineticBrixModelParameterizer_h
14 #define mitkDescriptivePharmacokineticBrixModelParameterizer_h
15 
18 
19 namespace mitk
20 {
26  ConcreteModelParameterizerBase<mitk::DescriptivePharmacokineticBrixModel>
27  {
28  public:
33 
35  itkNewMacro(Self);
36 
37  typedef Superclass::ModelBaseType ModelBaseType;
38  typedef Superclass::ModelBasePointer ModelBasePointer;
39 
40  typedef Superclass::ModelType ModelType;
41  typedef Superclass::ModelPointer ModelPointer;
42 
43  typedef Superclass::StaticParameterValueType StaticParameterValueType;
44  typedef Superclass::StaticParameterValuesType StaticParameterValuesType;
45  typedef Superclass::StaticParameterMapType StaticParameterMapType;
46 
47  typedef itk::Image<double, 3> BaseImageType;
48 
49  typedef Superclass::IndexType IndexType;
50 
51  itkSetMacro(Tau, double);
52  itkGetConstReferenceMacro(Tau, double);
53 
54  itkSetConstObjectMacro(BaseImage, BaseImageType);
55  itkGetConstObjectMacro(BaseImage, BaseImageType);
56 
57  /* Returns the global static parameters for the model.
58  * @remark this default implementation assumes no global static parameters exist.
59  * Thus an empty map is returned.*/
60  StaticParameterMapType GetGlobalStaticParameters() const override;
61 
62  /* Returns the local static parameters for the model at the given index.
63  * @remark this default implementation assumes no local static parameters exist.
64  * Thus an empty map is returned.*/
65  StaticParameterMapType GetLocalStaticParameters(const IndexType& currentPosition) const override;
66 
69  ParametersType GetDefaultInitialParameterization() const override;
70 
71  protected:
72 
74 
76 
78  double m_Tau;
79 
82  BaseImageType::ConstPointer m_BaseImage;
83 
84  private:
85 
86  //No copy constructor allowed
88  void operator=(const Self&); //purposely not implemented
89  };
90 }
91 
92 #endif
MITKPHARMACOKINETICS_EXPORT
#define MITKPHARMACOKINETICS_EXPORT
Definition: MitkPharmacokineticsExports.h:15
mitk::DescriptivePharmacokineticBrixModelParameterizer::StaticParameterValuesType
Superclass::StaticParameterValuesType StaticParameterValuesType
Definition: mitkDescriptivePharmacokineticBrixModelParameterizer.h:44
mitk::ModelParameterizerBase
Definition: mitkModelParameterizerBase.h:36
mitkDescriptivePharmacokineticBrixModel.h
mitk::ModelParameterizerBase::StaticParameterMapType
ModelBaseType::StaticParameterMapType StaticParameterMapType
Definition: mitkModelParameterizerBase.h:52
mitk::DescriptivePharmacokineticBrixModelParameterizer::BaseImageType
itk::Image< double, 3 > BaseImageType
Definition: mitkDescriptivePharmacokineticBrixModelParameterizer.h:47
mitk::DescriptivePharmacokineticBrixModelParameterizer::Pointer
itk::SmartPointer< Self > Pointer
Definition: mitkDescriptivePharmacokineticBrixModelParameterizer.h:31
mitk::DescriptivePharmacokineticBrixModelParameterizer::ModelPointer
Superclass::ModelPointer ModelPointer
Definition: mitkDescriptivePharmacokineticBrixModelParameterizer.h:41
itk::SmartPointer< Self >
mitk::DescriptivePharmacokineticBrixModelParameterizer::ModelBasePointer
Superclass::ModelBasePointer ModelBasePointer
Definition: mitkDescriptivePharmacokineticBrixModelParameterizer.h:38
mitk::DescriptivePharmacokineticBrixModelParameterizer::ModelBaseType
Superclass::ModelBaseType ModelBaseType
Definition: mitkDescriptivePharmacokineticBrixModelParameterizer.h:35
mitk::ConcreteModelParameterizerBase
Definition: mitkConcreteModelParameterizerBase.h:21
mitk
Find image slices visible on a given plane.
Definition: RenderingTests.dox:1
mitk::DescriptivePharmacokineticBrixModelParameterizer::StaticParameterMapType
Superclass::StaticParameterMapType StaticParameterMapType
Definition: mitkDescriptivePharmacokineticBrixModelParameterizer.h:45
mitk::DescriptivePharmacokineticBrixModelParameterizer::m_Tau
double m_Tau
Definition: mitkDescriptivePharmacokineticBrixModelParameterizer.h:78
mitk::ModelParameterizerBase::IndexType
::itk::Index< 3 > IndexType
Definition: mitkModelParameterizerBase.h:55
mitk::DescriptivePharmacokineticBrixModelParameterizer
Definition: mitkDescriptivePharmacokineticBrixModelParameterizer.h:25
mitk::DescriptivePharmacokineticBrixModelParameterizer::ModelType
Superclass::ModelType ModelType
Definition: mitkDescriptivePharmacokineticBrixModelParameterizer.h:40
mitk::ModelParameterizerBase::ParametersType
ModelBaseType::ParametersType ParametersType
Definition: mitkModelParameterizerBase.h:49
mitk::DescriptivePharmacokineticBrixModelParameterizer::StaticParameterValueType
Superclass::StaticParameterValueType StaticParameterValueType
Definition: mitkDescriptivePharmacokineticBrixModelParameterizer.h:43
mitk::DescriptivePharmacokineticBrixModelParameterizer::ConstPointer
itk::SmartPointer< const Self > ConstPointer
Definition: mitkDescriptivePharmacokineticBrixModelParameterizer.h:32
mitkConcreteModelParameterizerBase.h
mitk::DescriptivePharmacokineticBrixModelParameterizer::Self
DescriptivePharmacokineticBrixModelParameterizer Self
Definition: mitkDescriptivePharmacokineticBrixModelParameterizer.h:29
mitk::DescriptivePharmacokineticBrixModelParameterizer::m_BaseImage
BaseImageType::ConstPointer m_BaseImage
Definition: mitkDescriptivePharmacokineticBrixModelParameterizer.h:82
mitk::DescriptivePharmacokineticBrixModelParameterizer::IndexType
Superclass::IndexType IndexType
Definition: mitkDescriptivePharmacokineticBrixModelParameterizer.h:49
mitk::DescriptivePharmacokineticBrixModelParameterizer::Superclass
ConcreteModelParameterizerBase< mitk::DescriptivePharmacokineticBrixModel > Superclass
Definition: mitkDescriptivePharmacokineticBrixModelParameterizer.h:30