mitkImageToLiveWireContourFilter.cpp

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/*============================================================================

The Medical Imaging Interaction Toolkit (MITK)

Copyright (c) German Cancer Research Center (DKFZ)
All rights reserved.

Use of this source code is governed by a 3-clause BSD license that can be
found in the LICENSE file.

============================================================================*/

#include "mitkImageToLiveWireContourFilter.h"

#include <itkImageRegionIterator.h>
#include <itkShortestPathCostFunctionLiveWire.h>
#include <itkShortestPathImageFilter.h>

mitk::ImageToLiveWireContourFilter::ImageToLiveWireContourFilter()
{
  OutputType::Pointer output = dynamic_cast<OutputType *>(this->MakeOutput(0).GetPointer());
  this->SetNumberOfRequiredInputs(1);
  this->SetNumberOfIndexedOutputs(1);
  this->SetNthOutput(0, output.GetPointer());
}

mitk::ImageToLiveWireContourFilter::~ImageToLiveWireContourFilter()
{
}

void mitk::ImageToLiveWireContourFilter::SetInput(const mitk::ImageToLiveWireContourFilter::InputType *input)
{
  this->SetInput(0, input);
}

void mitk::ImageToLiveWireContourFilter::SetInput(unsigned int idx,
                                                  const mitk::ImageToLiveWireContourFilter::InputType *input)
{
  if (idx + 1 > this->GetNumberOfInputs())
  {
    this->SetNumberOfRequiredInputs(idx + 1);
  }
  if (input != static_cast<InputType *>(this->ProcessObject::GetInput(idx)))
  {
    this->ProcessObject::SetNthInput(idx, const_cast<InputType *>(input));
    this->Modified();
  }
}

const mitk::ImageToLiveWireContourFilter::InputType *mitk::ImageToLiveWireContourFilter::GetInput(void)
{
  if (this->GetNumberOfInputs() < 1)
    return nullptr;
  return static_cast<const mitk::ImageToLiveWireContourFilter::InputType *>(this->ProcessObject::GetInput(0));
}

const mitk::ImageToLiveWireContourFilter::InputType *mitk::ImageToLiveWireContourFilter::GetInput(unsigned int idx)
{
  if (this->GetNumberOfInputs() < 1)
    return nullptr;
  return static_cast<const mitk::ImageToLiveWireContourFilter::InputType *>(this->ProcessObject::GetInput(idx));
}

void mitk::ImageToLiveWireContourFilter::GenerateData()
{
  mitk::Image::ConstPointer input = dynamic_cast<const mitk::Image *>(this->GetInput());

  if (!input)
  {
    MITK_ERROR << "No input available.";
    itkExceptionMacro("mitk::ImageToLiveWireContourFilter: No input available. Please set the input!");
    return;
  }

  if (input->GetDimension() != 2)
  {
    MITK_ERROR << "Filter is only working on 2D images.";
    itkExceptionMacro("mitk::ImageToLiveWireContourFilter: Filter is only working on 2D images.. Please make sure that "
                      "the input is 2D!");
    return;
  }

  input->GetGeometry()->WorldToIndex(m_StartPoint, m_StartPointInIndex);
  input->GetGeometry()->WorldToIndex(m_EndPoint, m_EndPointInIndex);

  AccessFixedDimensionByItk(input, ItkProcessImage, 2);
}

template <typename TPixel, unsigned int VImageDimension>
void mitk::ImageToLiveWireContourFilter::ItkProcessImage(const itk::Image<TPixel, VImageDimension> *)
{
  // typedef itk::Image< TPixel, VImageDimension >                              InputImageType;
  // typedef itk::Image< float,  2 >                                          FloatImageType;

  // typedef typename itk::ShortestPathImageFilter< InputImageType, InputImageType >     ShortestPathImageFilterType;
  // typedef typename itk::ShortestPathCostFunctionLiveWire< InputImageType >   CostFunctionType;

  // typedef InputImageType::IndexType                                        IndexType;


  // typename IndexType startPoint, endPoint;
  //
  // startPoint[0] = m_StartPointInIndex[0];
  // startPoint[1] = m_StartPointInIndex[1];

  // endPoint[0] = m_EndPointInIndex[0];
  // endPoint[1] = m_EndPointInIndex[1];

  // typename IndexType startRegion;
  // startRegion[0] = startPoint[0] < endPoint[0] ? startPoint[0] : endPoint[0];
  // startRegion[1] = startPoint[1] < endPoint[1] ? startPoint[1] : endPoint[1];

  // typename InputImageType::SizeType size;
  // size[0] = startPoint[0] > endPoint[0] ? startPoint[0] : endPoint[0];
  // size[1] = startPoint[1] > endPoint[1] ? startPoint[1] : endPoint[1];

  // typename InputImageType::RegionType region;
  // region.SetSize( size );
  // region.SetIndex( startRegion );

  // typename CostFunctionType::Pointer costFunction = CostFunctionType::New();
  // costFunction->SetImage(inputImage);
  // costFunction->SetStartIndex(startPoint);
  // costFunction->SetEndIndex(endPoint);
  // costFunction->SetRequestedRegion(region);

  // ShortestPathImageFilterType::Pointer shortestPathFilter = ShortestPathImageFilterType::New();
  // shortestPathFilter->SetFullNeighborsMode(true);
  // shortestPathFilter->SetInput(inputImage);
  // shortestPathFilter->SetMakeOutputImage(true);
  // shortestPathFilter->SetStoreVectorOrder(false);
  // shortestPathFilter->SetStartIndex(startPoint);
  // shortestPathFilter->SetEndIndex(endPoint);

  // shortestPathFilter->Update();


  // std::vector< itk::Index<3> > shortestPath = shortestPathFilter->GetVectorPath();

  // OutputType::Pointer outputContour = this->GetOutput();
  // mitk::Image::ConstPointer input = dynamic_cast<const mitk::Image*>(this->GetInput());

  // std::vector< itk::Index<3> >::iterator pathIterator = shortestPath.begin();

  // while(pathIterator != shortestPath.end())
  //{
  //  mitk::Point3D currentPoint;
  //  currentPoint[0] = (*pathIterator)[0];
  //  currentPoint[1] = (*pathIterator)[1];

  //  input->GetGeometry(0)->IndexToWorld(currentPoint, currentPoint);
  //  outputContour->AddVertex(currentPoint);
  //
  //  pathIterator++;
  //}
  /*---------------------------------------------*/
}