mitkGIFNeighbouringGreyLevelDependenceFeatures.h

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/*============================================================================

The Medical Imaging Interaction Toolkit (MITK)

Copyright (c) German Cancer Research Center (DKFZ)
All rights reserved.

Use of this source code is governed by a 3-clause BSD license that can be
found in the LICENSE file.

============================================================================*/

#ifndef mitkGIFNeighbouringGreyLevelDependenceFeatures_h
#define mitkGIFNeighbouringGreyLevelDependenceFeatures_h

#include <mitkAbstractGlobalImageFeature.h>
#include <mitkBaseData.h>
#include <MitkCLUtilitiesExports.h>

#include <Eigen/src/Core/Array.h>

namespace mitk
{
  class MITKCLUTILITIES_EXPORT GIFNeighbouringGreyLevelDependenceFeature : public AbstractGlobalImageFeature
  {
    public:
      mitkClassMacro(GIFNeighbouringGreyLevelDependenceFeature, AbstractGlobalImageFeature);
      itkFactorylessNewMacro(Self);
      itkCloneMacro(Self);

      GIFNeighbouringGreyLevelDependenceFeature();

      FeatureListType CalculateFeatures(const Image::Pointer & image, const Image::Pointer &feature) override;

      FeatureNameListType GetFeatureNames() override;

      std::string GetCurrentFeatureEncoding() override;

      itkGetConstMacro(Range,double);
      itkSetMacro(Range, double);
    itkGetConstMacro(Alpha, int);
    itkSetMacro(Alpha, int);

    void CalculateFeaturesUsingParameters(const Image::Pointer & feature, const Image::Pointer &mask, const Image::Pointer &maskNoNAN, FeatureListType &featureList) override;
    void AddArguments(mitkCommandLineParser &parser) override;


    struct GIFNeighbouringGreyLevelDependenceFeatureConfiguration
    {
      double range;
      unsigned int direction;
      int alpha;

      double MinimumIntensity;
      double MaximumIntensity;
      int Bins;
      std::string FeatureEncoding;
    };

    private:
    double m_Range;
    int m_Alpha;
  };

}
#endif //mitkGIFNeighbouringGreyLevelDependenceFeature_h