mitkGIFFirstOrderHistogramStatistics.h

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/*============================================================================

The Medical Imaging Interaction Toolkit (MITK)

Copyright (c) German Cancer Research Center (DKFZ)
All rights reserved.

Use of this source code is governed by a 3-clause BSD license that can be
found in the LICENSE file.

============================================================================*/

#ifndef mitkGIFFirstOrderHistogramStatistics_h
#define mitkGIFFirstOrderHistogramStatistics_h

#include <mitkAbstractGlobalImageFeature.h>
#include <mitkBaseData.h>
#include <MitkCLUtilitiesExports.h>

namespace mitk
{
  class MITKCLUTILITIES_EXPORT GIFFirstOrderHistogramStatistics : public AbstractGlobalImageFeature
  {
  public:
    mitkClassMacro(GIFFirstOrderHistogramStatistics,AbstractGlobalImageFeature);
    itkFactorylessNewMacro(Self);
    itkCloneMacro(Self);

      GIFFirstOrderHistogramStatistics();

    FeatureListType CalculateFeatures(const Image::Pointer & image, const Image::Pointer &feature) override;

    FeatureNameListType GetFeatureNames() override;

    itkGetConstMacro(Range,double);
    itkSetMacro(Range, double);

    void CalculateFeaturesUsingParameters(const Image::Pointer & feature, const Image::Pointer &mask, const Image::Pointer &maskNoNAN, FeatureListType &featureList) override;
    void AddArguments(mitkCommandLineParser &parser) override;
    std::string GetCurrentFeatureEncoding() override;


    struct ParameterStruct {
      double MinimumIntensity;
      double MaximumIntensity;
      int Bins;
      std::string prefix;
    };

  private:
    double m_Range;
  };
}
#endif //mitkGIFFirstOrderHistogramStatistics_h