Medical Imaging Interaction Toolkit
2018.4.99-389bf124
Medical Imaging Interaction Toolkit
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#include <mitkUSDiPhASDevice.h>
Public Member Functions | |
mitkClassMacro (USDiPhASDevice, mitk::USDevice) | |
mitkNewMacro2Param (Self, std::string, std::string) | |
virtual std::string | GetDeviceClass () |
Returns the class of the device. More... | |
virtual USControlInterfaceProbes::Pointer | GetControlInterfaceProbes () |
Default getter for the probes control interface. Has to be implemented in a subclass if a probes control interface is available. Default implementation returns null. More... | |
virtual itk::SmartPointer< USAbstractControlInterface > | GetControlInterfaceCustom () |
Default getter for the custom control interface. Has to be implemented in a subclass if a custom control interface is available. Default implementation returns null. More... | |
virtual bool | OnInitialization () |
Is called during the initialization process. There is nothing done on the initialization of a mik::USDiPhASDevive object. More... | |
virtual bool | OnConnection () |
Is called during the connection process. Connect to the DiPhAS API. More... | |
virtual bool | OnDisconnection () |
Is called during the disconnection process. Deactivate and remove all DiPhAS API controls. A disconnect from the DiPhAS API is not possible for which reason the hardware stays in connected state even after calling this method. More... | |
virtual bool | OnActivation () |
Is called during the activation process. After this method is finished, the device is generating images in b mode. Changing scanning mode is possible afterwards by using the appropriate control interfaces. More... | |
virtual bool | OnDeactivation () |
Is called during the deactivation process. After a call to this method the device is connected, but not producing images anymore. More... | |
virtual void | OnFreeze (bool freeze) |
Changes scan state of the device if freeze is toggeled in mitk::USDevice. More... | |
USImageSource::Pointer | GetUSImageSource () |
ScanModeNative & | GetScanMode () |
void | UpdateScanmode () |
void | MessageCallback (const char *message) |
void | SetBursts (int bursts) |
void | SetInterleaved (bool interleaved) |
bool | IsInterleaved () |
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mitkClassMacro (USDevice, mitk::ImageSource) | |
virtual void | SetSpawnAcquireThread (bool _arg) |
virtual bool | GetSpawnAcquireThread () |
mitkNewMessage2Macro (PropertyChanged, const std::string &, const std::string &) | |
Event for being notified about changes of the micro service properties. This event can be used if no micro service context is available. More... | |
virtual itk::SmartPointer< USControlInterfaceBMode > | GetControlInterfaceBMode () |
Default getter for the b mode control interface. Has to be implemented in a subclass if a b mode control interface is available. Default implementation returns null. More... | |
virtual itk::SmartPointer< USControlInterfaceDoppler > | GetControlInterfaceDoppler () |
Default getter for the doppler control interface. Has to be implemented in a subclass if a doppler control interface is available. Default implementation returns null. More... | |
bool | Initialize () |
Changes device state to mitk::USDevice::State_Initialized. During initialization the virtual method mitk::USDevice::OnInitialization will be called. If this method returns false the initialization process will be canceled. Otherwise the mitk::USDevice is registered in a micro service. More... | |
bool | Connect () |
Connects this device. A connected device is ready to deliver images (i.e. be Activated). A Connected Device can be active. A disconnected Device cannot be active. Internally calls onConnect and then registers the device with the service. A device usually should override the OnConnection() method, but never the Connect() method, since this will possibly exclude the device from normal service management. The exact flow of events is: 0. Check if the device is already connected. If yes, return true anyway, but don't do anything. More... | |
void | ConnectAsynchron () |
bool | Disconnect () |
Works analogously to mitk::USDevice::Connect(). Don't override this Method, but onDisconnection instead. More... | |
bool | Activate () |
Activates this device. After the activation process, the device will start to produce images. This Method will fail, if the device is not connected. More... | |
void | Deactivate () |
Deactivates this device. After the deactivation process, the device will no longer produce images, but still be connected. More... | |
virtual void | SetIsFreezed (bool freeze) |
Can toggle if ultrasound image is currently updated or freezed. More... | |
virtual bool | GetIsFreezed () |
void | PushFilter (AbstractOpenCVImageFilter::Pointer filter) |
void | PushFilterIfNotPushedBefore (AbstractOpenCVImageFilter::Pointer filter) |
bool | RemoveFilter (AbstractOpenCVImageFilter::Pointer filter) |
void | ProbeChanged (std::string probename) |
To be called when the used probe changed. Will update the service properties. More... | |
void | DepthChanged (double depth) |
To be called when the scanning depth of the probe changed. Will update the service properties. More... | |
void | UpdateServiceProperty (std::string key, std::string value) |
Given property is updated in the device micro service. This method is mainly for being used by the control interface superclasses. You do not need to call it by yoursefs in your concrete control interface classes. More... | |
void | UpdateServiceProperty (std::string key, double value) |
void | UpdateServiceProperty (std::string key, bool value) |
bool | GetIsInitialized () |
True, if the device object is created and initialized, false otherwise. More... | |
bool | GetIsActive () |
True, if the device is currently generating image data, false otherwise. More... | |
bool | GetIsConnected () |
True, if the device is currently ready to start transmitting image data or is already transmitting image data. A disconnected device cannot be activated. More... | |
mitk::USDevice::USImageCropArea | GetCropArea () |
unsigned int | GetSizeOfImageVector () |
std::string | GetDeviceManufacturer () |
Deprecated -> use GetManufacturer() instead. More... | |
std::string | GetDeviceModel () |
Deprecated -> use GetName() instead. More... | |
std::string | GetDeviceComment () |
Deprecated -> use GetCommend() instead. More... | |
virtual std::string | GetManufacturer () |
virtual std::string | GetName () |
virtual std::string | GetComment () |
void | SetManufacturer (std::string manufacturer) |
void | SetName (std::string name) |
void | SetComment (std::string comment) |
virtual DeviceStates | GetDeviceState () |
virtual us::ServiceProperties | GetServiceProperties () |
void | GrabImage () |
virtual std::vector< mitk::USProbe::Pointer > | GetAllProbes ()=0 |
Returns all probes for this device or an empty vector it no probes were set Returns a std::vector of all probes that exist for this device if there were probes set while creating or modifying this USVideoDevice. Otherwise it returns an empty vector. Therefore always check if vector is filled, before using it! More... | |
virtual void | DeleteAllProbes () |
Cleans the std::vector containing all configured probes. More... | |
virtual mitk::USProbe::Pointer | GetCurrentProbe ()=0 |
Return current active probe for this USDevice Returns a pointer to the probe that is currently in use. If there were probes set while creating or modifying this USDevice. Returns null otherwise. More... | |
virtual void | AddNewProbe (mitk::USProbe::Pointer) |
adds a new probe to the device More... | |
virtual mitk::USProbe::Pointer | GetProbeByName (std::string name)=0 |
get the probe by its name Returns a pointer to the probe identified by the given name. If no probe of given name exists for this Device 0 is returned. More... | |
virtual void | RemoveProbeByName (std::string) |
Removes the Probe with the given name. More... | |
virtual void | SetDefaultProbeAsCurrentProbe () |
Sets the first existing probe or the default probe of the ultrasound device as the current probe of it. More... | |
virtual void | SetCurrentProbe (std::string) |
Sets the probe with the given name as current probe if the named probe exists. More... | |
virtual void | SetSpacing (double xSpacing, double ySpacing) |
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virtual std::vector< std::string > | GetClassHierarchy () const override |
virtual const char * | GetClassName () const |
Pointer | Clone () const |
OutputType * | GetOutput () |
Get the output data of this image source object. More... | |
const OutputType * | GetOutput () const |
OutputType * | GetOutput (DataObjectPointerArraySizeType idx) |
const OutputType * | GetOutput (DataObjectPointerArraySizeType idx) const |
itk::DataObject::Pointer | MakeOutput (DataObjectPointerArraySizeType idx) override |
Make a DataObject of the correct type to used as the specified output. More... | |
itk::DataObject::Pointer | MakeOutput (const DataObjectIdentifierType &name) override |
virtual vtkImageData * | GetVtkImageData () |
virtual const vtkImageData * | GetVtkImageData () const |
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OutputType * | GetOutput () |
const OutputType * | GetOutput () const |
OutputType * | GetOutput (DataObjectPointerArraySizeType idx) |
const OutputType * | GetOutput (DataObjectPointerArraySizeType idx) const |
virtual void | GraftOutput (OutputType *output) |
Graft the specified BaseData onto this BaseDataSource's output. More... | |
virtual void | GraftOutput (const DataObjectIdentifierType &key, OutputType *output) |
virtual void | GraftNthOutput (unsigned int idx, OutputType *output) |
Graft the specified base data object onto this BaseDataSource's idx'th output. More... | |
bool | Updating () const |
Access itk::ProcessObject::m_Updating. More... | |
Public Attributes | |
BeamformingParametersInterleaved_OA_US | paramsInterleaved |
BeamformingParametersPlaneWaveCompound | paramsPlaneWave |
Protected Member Functions | |
USDiPhASDevice (std::string manufacturer, std::string model) | |
virtual | ~USDiPhASDevice () |
void | InitializeScanMode () |
void | UpdateTransmitEvents () |
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virtual void | SetImageVector (std::vector< mitk::Image::Pointer > vec) |
void | ProvideViaOIGTL () |
Registers an OpenIGTLink device as a microservice so that we can send the images of this device via the network. More... | |
void | DisableOIGTL () |
Deregisters the microservices for OpenIGTLink. More... | |
us::ServiceProperties | ConstructServiceProperties () |
This Method constructs the service properties which can later be used to register the object with the Microservices Return service properties. More... | |
void | UnregisterOnService () |
Remove this device from the micro service. More... | |
USDevice (std::string manufacturer, std::string model) | |
Enforces minimal Metadata to be set. More... | |
USDevice (mitk::USImageMetadata::Pointer metadata) | |
Constructs a device with the given Metadata. Make sure the Metadata contains meaningful content! More... | |
~USDevice () override | |
void | GenerateData () override |
Grabs the next frame from the Video input. This method is called internally, whenever Update() is invoked by an Output. More... | |
std::string | GetServicePropertyLabel () |
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ImageSource () | |
~ImageSource () override | |
void | GenerateData () override |
A version of GenerateData() specific for image processing filters. More... | |
virtual void | ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, itk::ThreadIdType threadId) |
If an imaging filter can be implemented as a multithreaded algorithm, the filter will provide an implementation of ThreadedGenerateData(). More... | |
void | PrepareOutputs () override |
This method is intentionally left blank. More... | |
virtual void | AllocateOutputs () |
The GenerateData method normally allocates the buffers for all of the outputs of a filter. More... | |
virtual void | BeforeThreadedGenerateData () |
If an imaging filter needs to perform processing after the buffer has been allocated but before threads are spawned, the filter can can provide an implementation for BeforeThreadedGenerateData(). More... | |
virtual void | AfterThreadedGenerateData () |
If an imaging filter needs to perform processing after all processing threads have completed, the filter can can provide an implementation for AfterThreadedGenerateData(). More... | |
virtual unsigned int | SplitRequestedRegion (unsigned int i, unsigned int num, OutputImageRegionType &splitRegion) |
Split the output's RequestedRegion into "num" pieces, returning region "i" as "splitRegion". More... | |
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BaseDataSource () | |
~BaseDataSource () override | |
Protected Attributes | |
USDiPhASProbesControls::Pointer | m_ControlsProbes |
itk::SmartPointer< USAbstractControlInterface > | m_ControlInterfaceCustom |
mitk::USDiPhASImageSource::Pointer | m_ImageSource |
bool | m_IsRunning |
ScanModeNative | m_ScanMode |
int | m_BurstHalfwaveClockCount |
Beamforming | m_CurrentBeamformingAlgorithm |
bool | m_Interleaved |
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itk::ConditionVariable::Pointer | m_FreezeBarrier |
itk::SimpleMutexLock | m_FreezeMutex |
itk::MultiThreader::Pointer | m_MultiThreader |
itk::MultiThreader used for thread handling More... | |
itk::FastMutexLock::Pointer | m_ImageMutex |
mutex for images provided by the image source More... | |
int | m_ThreadID |
ID of the started thread. More... | |
std::vector< mitk::Image::Pointer > | m_ImageVector |
mitk::Vector3D | m_Spacing |
mitk::IGTLServer::Pointer | m_IGTLServer |
mitk::IGTLMessageProvider::Pointer | m_IGTLMessageProvider |
mitk::ImageToIGTLMessageFilter::Pointer | m_ImageToIGTLMsgFilter |
bool | m_IsFreezed |
DeviceStates | m_DeviceState |
USImageCropArea | m_CropArea |
unsigned int | m_NumberOfOutputs |
us::ServiceProperties | m_ServiceProperties |
Properties of the device's Microservice. More... | |
us::ServiceRegistration< Self > | m_ServiceRegistration |
The device's ServiceRegistration object that allows to modify it's Microservice registraton details. More... | |
Additional Inherited Members | |
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enum | DeviceStates { State_NoState, State_Initialized, State_Connected, State_Activated } |
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typedef ImageSource | Self |
typedef BaseDataSource | Superclass |
typedef itk::SmartPointer< Self > | Pointer |
typedef itk::SmartPointer< const Self > | ConstPointer |
typedef mitk::Image | OutputImageType |
Some convenient typedefs. More... | |
typedef OutputImageType | OutputType |
typedef OutputImageType::Pointer | OutputImagePointer |
typedef SlicedData::RegionType | OutputImageRegionType |
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typedef BaseDataSource | Self |
typedef itk::ProcessObject | Superclass |
typedef itk::SmartPointer< Self > | Pointer |
typedef itk::SmartPointer< const Self > | ConstPointer |
typedef BaseData | OutputType |
typedef itk::DataObject::DataObjectIdentifierType | DataObjectIdentifierType |
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static mitk::USDevice::PropertyKeys | GetPropertyKeys () |
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static const char * | GetStaticNameOfClass () |
static Pointer | New () |
Method for creation through the object factory. More... | |
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static const char * | GetStaticNameOfClass () |
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static ITK_THREAD_RETURN_TYPE | Acquire (void *pInfoStruct) |
static ITK_THREAD_RETURN_TYPE | ConnectThread (void *pInfoStruct) |
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static ITK_THREAD_RETURN_TYPE | ThreaderCallback (void *arg) |
Static function used as a "callback" by the MultiThreader. More... | |
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static Pointer | New () |
Definition at line 46 of file mitkUSDiPhASDevice.h.
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Constructs a mitk::USDiPhASDevice object by given manufacturer and model string. These strings are just for labeling the device in the micro service.
Control interfaces and image source are available directly after construction. Registration at the micro service happens not before initialization method was called.
Definition at line 16 of file mitkUSDiPhASDevice.cpp.
References mitk::USDevice::m_NumberOfOutputs, and mitk::ImageSource::MakeOutput().
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Definition at line 31 of file mitkUSDiPhASDevice.cpp.
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Default getter for the custom control interface. Has to be implemented in a subclass if a custom control interface is available. Default implementation returns null.
Reimplemented from mitk::USDevice.
Definition at line 47 of file mitkUSDiPhASDevice.cpp.
References m_ControlInterfaceCustom.
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Default getter for the probes control interface. Has to be implemented in a subclass if a probes control interface is available. Default implementation returns null.
Reimplemented from mitk::USDevice.
Definition at line 42 of file mitkUSDiPhASDevice.cpp.
References m_ControlsProbes.
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Returns the class of the device.
Implements mitk::USDevice.
Definition at line 37 of file mitkUSDiPhASDevice.cpp.
ScanModeNative & mitk::USDiPhASDevice::GetScanMode | ( | ) |
Definition at line 57 of file mitkUSDiPhASDevice.cpp.
References m_ScanMode.
Referenced by mitk::USDiPhASImageSource::GetNextRawImage(), mitk::USDiPhASImageSource::ImageDataCallback(), mitk::USDiPhASCustomControls::OnSetAveragingCount(), mitk::USDiPhASCustomControls::OnSetBandpassEnabled(), mitk::USDiPhASCustomControls::OnSetDataType(), mitk::USDiPhASCustomControls::OnSetHighCut(), mitk::USDiPhASCustomControls::OnSetLowCut(), mitk::USDiPhASCustomControls::OnSetPitch(), mitk::USDiPhASCustomControls::OnSetReconstructedLines(), mitk::USDiPhASCustomControls::OnSetReconstructedSamples(), mitk::USDiPhASCustomControls::OnSetScanDepth(), mitk::USDiPhASCustomControls::OnSetSpeedOfSound(), mitk::USDiPhASCustomControls::OnSetTGCMax(), mitk::USDiPhASCustomControls::OnSetTGCMin(), mitk::USDiPhASCustomControls::OnSetTransmitEvents(), mitk::USDiPhASCustomControls::OnSetTransmitPhaseLength(), mitk::USDiPhASCustomControls::OnSetVoltage(), mitk::USDiPhASImageSource::OrderImagesInterleaved(), mitk::USDiPhASImageSource::OrderImagesUltrasound(), mitk::USDiPhASImageSource::SetDataType(), mitk::USDiPhASImageSource::SetRecordingStatus(), and mitk::USDiPhASImageSource::UpdateImageGeometry().
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Implements mitk::USDevice.
Definition at line 52 of file mitkUSDiPhASDevice.cpp.
References m_ImageSource.
Referenced by mitk::USDiPhASCustomControls::OnSetCompensateEnergy(), mitk::USDiPhASCustomControls::OnSetCompensateScattering(), mitk::USDiPhASCustomControls::OnSetDataType(), mitk::USDiPhASCustomControls::OnSetRecord(), mitk::USDiPhASCustomControls::OnSetSavingSettings(), mitk::USDiPhASCustomControls::OnSetScatteringCoefficient(), mitk::USDiPhASCustomControls::OnSetUseBModeFilter(), mitk::USDiPhASCustomControls::OnSetVerticalSpacing(), and mitk::USDiPhASCustomControls::passGUIOut().
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The DiPhAS API expects callback functions to pass both status messages and the processed images to the user. The message callback is here, the data itself is given directly to the image source. This method sets up the scanmode at the begining
Definition at line 199 of file mitkUSDiPhASDevice.cpp.
References m_ScanMode, SetInterleaved(), and UpdateTransmitEvents().
Referenced by OnConnection().
bool mitk::USDiPhASDevice::IsInterleaved | ( | ) |
Definition at line 273 of file mitkUSDiPhASDevice.cpp.
References m_Interleaved.
Referenced by mitk::USDiPhASCustomControls::OnSetSpeedOfSound().
void mitk::USDiPhASDevice::MessageCallback | ( | const char * | message | ) |
This method forwards messages from the API to the user
Definition at line 263 of file mitkUSDiPhASDevice.cpp.
References MITK_INFO.
Referenced by WrapperMessageCallback().
mitk::USDiPhASDevice::mitkClassMacro | ( | USDiPhASDevice | , |
mitk::USDevice | |||
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mitk::USDiPhASDevice::mitkNewMacro2Param | ( | Self | , |
std::string | , | ||
std::string | |||
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Is called during the activation process. After this method is finished, the device is generating images in b mode. Changing scanning mode is possible afterwards by using the appropriate control interfaces.
mitk::Exception | if something goes wrong at the API calls |
Implements mitk::USDevice.
Definition at line 119 of file mitkUSDiPhASDevice.cpp.
References m_ControlsProbes, m_IsRunning, and MITK_WARN.
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Is called during the connection process. Connect to the DiPhAS API.
mitk::Exception | if something goes wrong at the API calls |
Implements mitk::USDevice.
Definition at line 96 of file mitkUSDiPhASDevice.cpp.
References InitializeScanMode(), m_ImageSource, m_ScanMode, WrapperImageDataCallback(), and WrapperMessageCallback().
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Is called during the deactivation process. After a call to this method the device is connected, but not producing images anymore.
mitk::Exception | if something goes wrong at the API calls |
Implements mitk::USDevice.
Definition at line 138 of file mitkUSDiPhASDevice.cpp.
References m_IsRunning.
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Is called during the disconnection process. Deactivate and remove all DiPhAS API controls. A disconnect from the DiPhAS API is not possible for which reason the hardware stays in connected state even after calling this method.
mitk::Exception | if something goes wrong at the API calls |
Implements mitk::USDevice.
Definition at line 112 of file mitkUSDiPhASDevice.cpp.
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Changes scan state of the device if freeze is toggeled in mitk::USDevice.
Reimplemented from mitk::USDevice.
Definition at line 145 of file mitkUSDiPhASDevice.cpp.
References m_IsRunning.
Referenced by UpdateScanmode().
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Is called during the initialization process. There is nothing done on the initialization of a mik::USDiPhASDevive object.
Implements mitk::USDevice.
Definition at line 64 of file mitkUSDiPhASDevice.cpp.
void mitk::USDiPhASDevice::SetBursts | ( | int | bursts | ) |
Definition at line 268 of file mitkUSDiPhASDevice.cpp.
References m_BurstHalfwaveClockCount.
Referenced by mitk::USDiPhASCustomControls::OnSetExcitationFrequency().
void mitk::USDiPhASDevice::SetInterleaved | ( | bool | interleaved | ) |
Definition at line 278 of file mitkUSDiPhASDevice.cpp.
References m_CurrentBeamformingAlgorithm, m_Interleaved, m_ScanMode, mitk::None, paramsInterleaved, and paramsPlaneWave.
Referenced by InitializeScanMode(), mitk::USDiPhASCustomControls::OnSetMode(), mitk::USDiPhASCustomControls::OnSetSpeedOfSound(), and UpdateScanmode().
void mitk::USDiPhASDevice::UpdateScanmode | ( | ) |
Updates the Scanmode and feeds it to the hardware
Definition at line 151 of file mitkUSDiPhASDevice.cpp.
References m_ControlInterfaceCustom, m_ImageSource, m_Interleaved, m_ScanMode, OnFreeze(), SetInterleaved(), and UpdateTransmitEvents().
Referenced by mitk::USDiPhASCustomControls::OnSetAveragingCount(), mitk::USDiPhASCustomControls::OnSetBandpassEnabled(), mitk::USDiPhASCustomControls::OnSetDataType(), mitk::USDiPhASCustomControls::OnSetExcitationFrequency(), mitk::USDiPhASCustomControls::OnSetHighCut(), mitk::USDiPhASCustomControls::OnSetLowCut(), mitk::USDiPhASCustomControls::OnSetMode(), mitk::USDiPhASCustomControls::OnSetPitch(), mitk::USDiPhASCustomControls::OnSetReconstructedLines(), mitk::USDiPhASCustomControls::OnSetReconstructedSamples(), mitk::USDiPhASCustomControls::OnSetScanDepth(), mitk::USDiPhASCustomControls::OnSetSpeedOfSound(), mitk::USDiPhASCustomControls::OnSetTGCMax(), mitk::USDiPhASCustomControls::OnSetTGCMin(), mitk::USDiPhASCustomControls::OnSetTransmitEvents(), mitk::USDiPhASCustomControls::OnSetTransmitPhaseLength(), mitk::USDiPhASCustomControls::OnSetVoltage(), and mitk::USDiPhASImageSource::SetRecordingStatus().
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Definition at line 166 of file mitkUSDiPhASDevice.cpp.
References m_BurstHalfwaveClockCount, and m_ScanMode.
Referenced by InitializeScanMode(), and UpdateScanmode().
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Definition at line 163 of file mitkUSDiPhASDevice.h.
Referenced by SetBursts(), and UpdateTransmitEvents().
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Definition at line 157 of file mitkUSDiPhASDevice.h.
Referenced by GetControlInterfaceCustom(), and UpdateScanmode().
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Definition at line 156 of file mitkUSDiPhASDevice.h.
Referenced by GetControlInterfaceProbes(), and OnActivation().
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Definition at line 164 of file mitkUSDiPhASDevice.h.
Referenced by SetInterleaved().
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Definition at line 159 of file mitkUSDiPhASDevice.h.
Referenced by GetUSImageSource(), OnConnection(), and UpdateScanmode().
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Definition at line 165 of file mitkUSDiPhASDevice.h.
Referenced by IsInterleaved(), SetInterleaved(), and UpdateScanmode().
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Definition at line 161 of file mitkUSDiPhASDevice.h.
Referenced by OnActivation(), OnDeactivation(), and OnFreeze().
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Definition at line 162 of file mitkUSDiPhASDevice.h.
Referenced by GetScanMode(), InitializeScanMode(), OnConnection(), SetInterleaved(), UpdateScanmode(), and UpdateTransmitEvents().
BeamformingParametersInterleaved_OA_US mitk::USDiPhASDevice::paramsInterleaved |
Definition at line 128 of file mitkUSDiPhASDevice.h.
Referenced by SetInterleaved().
BeamformingParametersPlaneWaveCompound mitk::USDiPhASDevice::paramsPlaneWave |
Definition at line 129 of file mitkUSDiPhASDevice.h.
Referenced by SetInterleaved().