mitk::MaskedDynamicImageStatisticsGenerator Class Reference

#include <mitkMaskedDynamicImageStatisticsGenerator.h>

Inheritance diagram for mitk::MaskedDynamicImageStatisticsGenerator:

Collaboration diagram for mitk::MaskedDynamicImageStatisticsGenerator:

Public Types
typedef itk::Array< double >	ResultType

Public Member Functions
	mitkClassMacroItkParent (MaskedDynamicImageStatisticsGenerator, itk::Object)
virtual void	SetDynamicImage (const Image *_arg)
virtual const Image *	GetDynamicImage ()
virtual void	SetMask (const Image *_arg)
virtual const Image *	GetMask ()
const ResultType &	GetMaximum ()
const ResultType &	GetMinimum ()
const ResultType &	GetMean ()
const ResultType &	GetSigma ()
const ResultType &	GetVariance ()
const ResultType &	GetSum ()
void	Generate ()

Static Public Member Functions
static Pointer	New ()

Protected Member Functions
	MaskedDynamicImageStatisticsGenerator ()
	~MaskedDynamicImageStatisticsGenerator () override
template<typename TPixel , unsigned int VDim>
void	DoCalculateStatistics (const itk::Image< TPixel, VDim > *image)
virtual void	CheckValidInputs () const
bool	HasOutdatedResults () const

Protected Attributes
itk::TimeStamp	m_GenerationTimeStamp

Detailed Description

Simple mitk based wrapper for the itk::MaskedNaryStatisticsImageFilter. takes an input image and a mask image (both mitk::Images) and calculates the statistic of the input image within the given mask (every pixel != 0).
The class assumes that the mask image is 3D (only one time step), if this is not the case only the first time step will be used as mask.
If the input image has multiple time steps, the statistics will be calculated for each time step. This the result arrays will always have as many values as the input image has time steps.

Definition at line 30 of file mitkMaskedDynamicImageStatisticsGenerator.h.

Member Typedef Documentation

ResultType

typedef itk::Array<double> mitk::MaskedDynamicImageStatisticsGenerator::ResultType

Definition at line 35 of file mitkMaskedDynamicImageStatisticsGenerator.h.

Constructor & Destructor Documentation

MaskedDynamicImageStatisticsGenerator()

mitk::MaskedDynamicImageStatisticsGenerator::MaskedDynamicImageStatisticsGenerator ( )

protected

Definition at line 20 of file mitkMaskedDynamicImageStatisticsGenerator.cpp.

~MaskedDynamicImageStatisticsGenerator()

mitk::MaskedDynamicImageStatisticsGenerator::~MaskedDynamicImageStatisticsGenerator ( )

overrideprotected

Definition at line 26 of file mitkMaskedDynamicImageStatisticsGenerator.cpp.

Member Function Documentation

CheckValidInputs()

void mitk::MaskedDynamicImageStatisticsGenerator::CheckValidInputs ( ) const

protectedvirtual

Definition at line 162 of file mitkMaskedDynamicImageStatisticsGenerator.cpp.

References mitkThrow.

Referenced by GetMaximum(), GetMean(), GetMinimum(), GetSigma(), GetSum(), and GetVariance().

DoCalculateStatistics()

template<typename TPixel , unsigned int VDim>

void mitk::MaskedDynamicImageStatisticsGenerator::DoCalculateStatistics ( const itk::Image< TPixel, VDim > *  image )

protected

Definition at line 89 of file mitkMaskedDynamicImageStatisticsGenerator.cpp.

References mitk::CastToItkImage(), itk::Image, m_GenerationTimeStamp, and mitk::ImageTimeSelector::New().

Referenced by Generate().

Generate()

void mitk::MaskedDynamicImageStatisticsGenerator::Generate

(

)

Definition at line 140 of file mitkMaskedDynamicImageStatisticsGenerator.cpp.

References AccessFixedDimensionByItk, DoCalculateStatistics(), and mitkThrow.

Referenced by GetMaximum(), GetMean(), GetMinimum(), GetSigma(), GetSum(), and GetVariance().

GetDynamicImage()

virtual const Image* mitk::MaskedDynamicImageStatisticsGenerator::GetDynamicImage ( )

virtual

GetMask()

virtual const Image* mitk::MaskedDynamicImageStatisticsGenerator::GetMask ( )

virtual

GetMaximum()

const mitk::MaskedDynamicImageStatisticsGenerator::ResultType & mitk::MaskedDynamicImageStatisticsGenerator::GetMaximum

(

)

Definition at line 28 of file mitkMaskedDynamicImageStatisticsGenerator.cpp.

References CheckValidInputs(), Generate(), and HasOutdatedResults().

GetMean()

const mitk::MaskedDynamicImageStatisticsGenerator::ResultType & mitk::MaskedDynamicImageStatisticsGenerator::GetMean

(

)

Definition at line 48 of file mitkMaskedDynamicImageStatisticsGenerator.cpp.

References CheckValidInputs(), Generate(), and HasOutdatedResults().

GetMinimum()

const mitk::MaskedDynamicImageStatisticsGenerator::ResultType & mitk::MaskedDynamicImageStatisticsGenerator::GetMinimum

(

)

Definition at line 38 of file mitkMaskedDynamicImageStatisticsGenerator.cpp.

References CheckValidInputs(), Generate(), and HasOutdatedResults().

GetSigma()

const mitk::MaskedDynamicImageStatisticsGenerator::ResultType & mitk::MaskedDynamicImageStatisticsGenerator::GetSigma

(

)

Definition at line 58 of file mitkMaskedDynamicImageStatisticsGenerator.cpp.

References CheckValidInputs(), Generate(), and HasOutdatedResults().

GetSum()

const mitk::MaskedDynamicImageStatisticsGenerator::ResultType & mitk::MaskedDynamicImageStatisticsGenerator::GetSum

(

)

Definition at line 78 of file mitkMaskedDynamicImageStatisticsGenerator.cpp.

References CheckValidInputs(), Generate(), and HasOutdatedResults().

GetVariance()

const mitk::MaskedDynamicImageStatisticsGenerator::ResultType & mitk::MaskedDynamicImageStatisticsGenerator::GetVariance

(

)

Definition at line 68 of file mitkMaskedDynamicImageStatisticsGenerator.cpp.

References CheckValidInputs(), Generate(), and HasOutdatedResults().

HasOutdatedResults()

bool mitk::MaskedDynamicImageStatisticsGenerator::HasOutdatedResults ( ) const

protected

Definition at line 172 of file mitkMaskedDynamicImageStatisticsGenerator.cpp.

References m_GenerationTimeStamp.

Referenced by GetMaximum(), GetMean(), GetMinimum(), GetSigma(), GetSum(), and GetVariance().

mitkClassMacroItkParent()

mitk::MaskedDynamicImageStatisticsGenerator::mitkClassMacroItkParent	(	MaskedDynamicImageStatisticsGenerator	,
		itk::Object
	)

New()

static Pointer mitk::MaskedDynamicImageStatisticsGenerator::New ( )

static

Referenced by mitk::AterialInputFunctionGenerator::CalculateAIFAndGetResult(), Generate3StepLinearModelFit_ROIBased(), generateAIFbasedModelFit_ROIBased(), generateDescriptiveBrixModel_ROIBased(), generateModelFit_ROIBased(), and mitkMaskedDynamicImageStatisticsGeneratorTest().

SetDynamicImage()

virtual void mitk::MaskedDynamicImageStatisticsGenerator::SetDynamicImage ( const Image *  _arg )

virtual

SetMask()

virtual void mitk::MaskedDynamicImageStatisticsGenerator::SetMask ( const Image *  _arg )

virtual

Member Data Documentation

m_GenerationTimeStamp

itk::TimeStamp mitk::MaskedDynamicImageStatisticsGenerator::m_GenerationTimeStamp

protected

Definition at line 65 of file mitkMaskedDynamicImageStatisticsGenerator.h.

Referenced by DoCalculateStatistics(), and HasOutdatedResults().

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The documentation for this class was generated from the following files:

• mitkMaskedDynamicImageStatisticsGenerator.h
• mitkMaskedDynamicImageStatisticsGenerator.cpp