QmitkAdaptiveRegionGrowingToolGUI. More...

#include <QmitkAdaptiveRegionGrowingToolGUI.h>

Inheritance diagram for QmitkAdaptiveRegionGrowingToolGUI:

Collaboration diagram for QmitkAdaptiveRegionGrowingToolGUI:

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Public Member Functions
	mitkClassMacro (QmitkAdaptiveRegionGrowingToolGUI, QmitkToolGUI)
	mitkClassMacro More...

Pointer	Clone () const

	QmitkAdaptiveRegionGrowingToolGUI (QWidget *parent=nullptr)

virtual void	CreateConnections ()
	Method to create the connections for the component. This Method is obligatory even if no connections is needed. More...

virtual void	SetDataStorage (mitk::DataStorage *dataStorage)
	Method to set the default data storage. More...

void	SetDataNodeNames (std::string labledSegmentation, std::string binaryImage, std::string surface, std::string maskedSegmentation)
	Method to set the name of a data node. More...

void	EnableControls (bool enable)
	Method to enable/disable controls for region growing. More...

void	SetInputImageNode (mitk::DataNode *node)
	Method to set the input image node. More...

void	Deactivated ()

void	Activated ()

Public Member Functions inherited from QmitkToolGUI
	mitkClassMacroItkParent (QmitkToolGUI, itk::Object)

void	SetTool (mitk::Tool *tool)

void	Register () const override

void	UnRegister () const ITK_NOEXCEPT ITK_OVERRIDE

void	SetReferenceCount (int) override

	~QmitkToolGUI () override

Static Public Member Functions
static Pointer	New ()

Public Attributes
Ui::QmitkAdaptiveRegionGrowingToolGUIControls	m_Controls
	The created GUI from the .ui-File. This Attribute is obligatory. More...

Protected Slots
void	RunSegmentation ()
	Method to start the segmentation. More...

void	ChangeLevelWindow (double newValue)
	Method to change the level window. More...

void	IncreaseSlider ()
	Method to increase the preview slider. More...

void	DecreaseSlider ()
	Method to decrease the preview slider. More...

void	ConfirmSegmentation ()
	Method to confirm the preview segmentation. More...

void	UseVolumeRendering (bool on)
	Method to switch the volume rendering on/off. More...

void	SetLowerThresholdValue (double lowerThreshold)
	Method to set the lower threshold. More...

void	SetUpperThresholdValue (double upperThreshold)
	Method to set upper threshold. More...

void	OnNewToolAssociated (mitk::Tool *)
	Method to determine which tool to activate. More...

Protected Member Functions
	~QmitkAdaptiveRegionGrowingToolGUI () override
	Destructor. More...

void	OnPointAdded ()
	Method to calculate parameter settings, when a seed point is set. More...

Protected Member Functions inherited from QmitkToolGUI
virtual void	BusyStateChanged (bool)

Protected Attributes
mitk::AdaptiveRegionGrowingTool::Pointer	m_RegionGrow3DTool

mitk::DataStorage *	m_DataStorage

mitk::DataNode::Pointer	m_InputImageNode

Protected Attributes inherited from QmitkToolGUI
mitk::Tool::Pointer	m_Tool

Additional Inherited Members
Signals inherited from QmitkToolGUI
void	NewToolAssociated (mitk::Tool *)

Detailed Description

QmitkAdaptiveRegionGrowingToolGUI.

Adaptive Region Growing View class of the segmentation.

Definition at line 40 of file QmitkAdaptiveRegionGrowingToolGUI.h.

Constructor & Destructor Documentation

◆ QmitkAdaptiveRegionGrowingToolGUI()

QmitkAdaptiveRegionGrowingToolGUI::QmitkAdaptiveRegionGrowingToolGUI ( QWidget * parent = nullptr )

Definition at line 43 of file QmitkAdaptiveRegionGrowingToolGUI.cpp.

◆ ~QmitkAdaptiveRegionGrowingToolGUI()

QmitkAdaptiveRegionGrowingToolGUI::~QmitkAdaptiveRegionGrowingToolGUI ( )

overrideprotected

Destructor.

Definition at line 71 of file QmitkAdaptiveRegionGrowingToolGUI.cpp.

References m_RegionGrow3DTool.

Member Function Documentation

◆ Activated()

void QmitkAdaptiveRegionGrowingToolGUI::Activated ( )

Definition at line 946 of file QmitkAdaptiveRegionGrowingToolGUI.cpp.

◆ ChangeLevelWindow

void QmitkAdaptiveRegionGrowingToolGUI::ChangeLevelWindow ( double newValue )

protectedslot

Method to change the level window.

This method is called, when the level window slider is changed via the slider in the control widget

Parameters

new value

Definition at line 613 of file QmitkAdaptiveRegionGrowingToolGUI.cpp.

References mitk::RenderingManager::GetInstance(), mitk::DataStorage::GetNamedNode(), m_DataStorage, mitk::RenderingManager::RequestUpdateAll(), and mitk::LevelWindow::SetLevelWindow().

Referenced by CreateConnections(), DecreaseSlider(), EnableControls(), IncreaseSlider(), and RunSegmentation().

◆ Clone()

Pointer QmitkAdaptiveRegionGrowingToolGUI::Clone ( ) const

Referenced by RunSegmentation().

◆ ConfirmSegmentation

void QmitkAdaptiveRegionGrowingToolGUI::ConfirmSegmentation ( )

protectedslot

Method to confirm the preview segmentation.

This method is called, when the "Confirm Segmentation" button is clicked.

Definition at line 673 of file QmitkAdaptiveRegionGrowingToolGUI.cpp.

References AccessByItk, QmitkConfirmSegmentationDialog::CANCEL_SEGMENTATION, mitk::CastToItkImage(), QmitkConfirmSegmentationDialog::CREATE_NEW_SEGMENTATION, mitk::BaseRenderer::GetInstance(), mitk::RenderingManager::GetInstance(), mitk::DataStorage::GetNamedNode(), mitk::DataStorage::GetNamedObject(), mitk::BaseRenderer::GetRenderWindowByName(), mitk::BaseRenderer::GetTimeStep(), ITKThresholding(), m_Controls, m_DataStorage, m_InputImageNode, m_RegionGrow3DTool, mitk::ImageTimeSelector::New(), QmitkConfirmSegmentationDialog::OVERWRITE_SEGMENTATION, mitk::RenderingManager::RequestUpdateAll(), and QmitkConfirmSegmentationDialog::SetSegmentationName().

Referenced by CreateConnections().

◆ CreateConnections()

void QmitkAdaptiveRegionGrowingToolGUI::CreateConnections ( )

virtual

Method to create the connections for the component. This Method is obligatory even if no connections is needed.

Definition at line 121 of file QmitkAdaptiveRegionGrowingToolGUI.cpp.

References ChangeLevelWindow(), ConfirmSegmentation(), m_Controls, RunSegmentation(), SetLowerThresholdValue(), and SetUpperThresholdValue().

◆ Deactivated()

void QmitkAdaptiveRegionGrowingToolGUI::Deactivated ( )

Definition at line 932 of file QmitkAdaptiveRegionGrowingToolGUI.cpp.

References mitk::DataStorage::GetNamedNode(), m_Controls, and m_DataStorage.

◆ DecreaseSlider

void QmitkAdaptiveRegionGrowingToolGUI::DecreaseSlider ( )

protectedslot

Method to decrease the preview slider.

This method is called, when the - button is clicked and decreases the value by 1

Definition at line 651 of file QmitkAdaptiveRegionGrowingToolGUI.cpp.

References ChangeLevelWindow(), and m_Controls.

◆ EnableControls()

void QmitkAdaptiveRegionGrowingToolGUI::EnableControls ( bool enable )

Method to enable/disable controls for region growing.

This method checks if a seed point is set and a segmentation exists.

Parameters

enable/disable controls

Definition at line 804 of file QmitkAdaptiveRegionGrowingToolGUI.cpp.

References mitk::CastToItkImage(), ChangeLevelWindow(), mitk::RenderingManager::GetInstance(), mitk::DataStorage::GetNamedNode(), m_Controls, m_DataStorage, m_RegionGrow3DTool, max(), min(), MITK_ERROR, mitk::RenderingManager::RequestUpdateAll(), and mitk::DataNode::SetData().

Referenced by OnNewToolAssociated(), and RunSegmentation().

◆ IncreaseSlider

void QmitkAdaptiveRegionGrowingToolGUI::IncreaseSlider ( )

protectedslot

Method to increase the preview slider.

This method is called, when the + button is clicked and increases the value by 1

Definition at line 662 of file QmitkAdaptiveRegionGrowingToolGUI.cpp.

References ChangeLevelWindow(), and m_Controls.

◆ mitkClassMacro()

QmitkAdaptiveRegionGrowingToolGUI::mitkClassMacro	(	QmitkAdaptiveRegionGrowingToolGUI	,
		QmitkToolGUI
	)

mitkClassMacro

◆ New()

static Pointer QmitkAdaptiveRegionGrowingToolGUI::New ( )

static

◆ OnNewToolAssociated

void QmitkAdaptiveRegionGrowingToolGUI::OnNewToolAssociated ( mitk::Tool * tool )

protectedslot

Method to determine which tool to activate.

This method listens to the tool manager and activates this tool if requested otherwise disables this view

Definition at line 82 of file QmitkAdaptiveRegionGrowingToolGUI.cpp.

References EnableControls(), mitk::DataStorage::GetNamedNode(), m_DataStorage, m_RegionGrow3DTool, OnPointAdded(), mitk::DataStorage::Remove(), and SetInputImageNode().

◆ OnPointAdded()

void QmitkAdaptiveRegionGrowingToolGUI::OnPointAdded ( )

protected

Method to calculate parameter settings, when a seed point is set.

Definition at line 172 of file QmitkAdaptiveRegionGrowingToolGUI.cpp.

References AccessPixel(), mitk::FastSinglePixelAccess(), mitk::Image::GetChannelDescriptor(), mitk::DataNode::GetData(), mitk::BaseData::GetGeometry(), mitk::BaseRenderer::GetInstance(), mitk::ChannelDescriptor::GetPixelType(), mitk::BaseRenderer::GetRenderWindowByName(), mitk::ImageStatisticsHolder::GetScalarValueMax(), mitk::ImageStatisticsHolder::GetScalarValueMin(), mitk::Image::GetStatistics(), image, mitk::BaseGeometry::IsIndexInside(), mitk::BaseGeometry::IsInside(), k(), m_Controls, m_InputImageNode, m_RegionGrow3DTool, max(), min(), mitkPixelTypeMultiplex3, mitkPixelTypeMultiplex4, and mitk::BaseGeometry::WorldToIndex().

Referenced by OnNewToolAssociated().

◆ RunSegmentation

void QmitkAdaptiveRegionGrowingToolGUI::RunSegmentation ( )

protectedslot

Method to start the segmentation.

This method is called, when the "Start Segmentation" button is clicked.

Definition at line 319 of file QmitkAdaptiveRegionGrowingToolGUI.cpp.

References AccessByItk_2, mitk::DataStorage::Add(), ChangeLevelWindow(), Clone(), EnableControls(), mitk::BaseData::GetGeometry(), mitk::ProgressBar::GetInstance(), mitk::BaseRenderer::GetInstance(), mitk::RenderingManager::GetInstance(), mitk::DataStorage::GetNamedNode(), mitk::BaseRenderer::GetRenderWindowByName(), mitk::BaseRenderer::GetTimeStep(), mitk::ImportItkImage(), mitk::BaseGeometry::IsInside(), m_Controls, m_DataStorage, m_InputImageNode, m_RegionGrow3DTool, max(), min(), MITK_INFO, mitk::BoolProperty::New(), mitk::IntProperty::New(), mitk::FloatProperty::New(), mitk::ImageTimeSelector::New(), mitk::StringProperty::New(), mitk::ColorProperty::New(), mitk::DataNode::New(), mitk::ProgressBar::Progress(), mitk::DataStorage::Remove(), mitk::RenderingManager::RequestUpdateAll(), mitk::LevelWindow::SetLevelWindow(), mitk::LevelWindow::SetRangeMinMax(), StartRegionGrowing(), and mitk::BaseGeometry::WorldToIndex().

Referenced by CreateConnections().

◆ SetDataNodeNames()

void QmitkAdaptiveRegionGrowingToolGUI::SetDataNodeNames	(	std::string	labledSegmentation,
		std::string	binaryImage,
		std::string	surface,
		std::string	maskedSegmentation
	)