CLSkullMask.cpp File Reference

#include "time.h"
#include <sstream>
#include <fstream>
#include <mitkIOUtil.h>
#include "mitkCommandLineParser.h"
#include "itkImageRegionIterator.h"
#include <mitkITKImageImport.h>
#include <mitkImageCast.h>
#include <mitkImageAccessByItk.h>
#include <itkLabelStatisticsImageFilter.h>
#include <itkMinimumMaximumImageCalculator.h>

Go to the source code of this file.

Macros
#define	mitkCLPolyToNrrd_cpp

Typedefs
typedef itk::Image< double, 3 >	FloatImageType
typedef itk::Image< unsigned char, 3 >	MaskImageType

Functions
template<typename TPixel , unsigned int VImageDimension>
static void	DetectSkull (itk::Image< TPixel, VImageDimension > *itkImage, mitk::Image::Pointer im2, mitk::Image::Pointer mask1, std::string output)
int	main (int argc, char *argv[])

Macro Definition Documentation

mitkCLPolyToNrrd_cpp

#define mitkCLPolyToNrrd_cpp

Definition at line 13 of file CLSkullMask.cpp.

Typedef Documentation

FloatImageType

typedef itk::Image< double, 3 > FloatImageType

Definition at line 31 of file CLSkullMask.cpp.

MaskImageType

typedef itk::Image< unsigned char, 3 > MaskImageType

Definition at line 32 of file CLSkullMask.cpp.

Function Documentation

DetectSkull()

template<typename TPixel , unsigned int VImageDimension>

static void DetectSkull ( itk::Image< TPixel, VImageDimension > *  itkImage, mitk::Image::Pointer  im2, mitk::Image::Pointer  mask1, std::string  output  )

static

Definition at line 36 of file CLSkullMask.cpp.

References mitk::CastToItkImage(), mitk::ImportItkImage(), and mitk::IOUtil::Save().

main()

int main	(	int	argc,
		char *	argv[]
	)

Definition at line 64 of file CLSkullMask.cpp.

References mitkCommandLineParser::addArgument(), us::any_cast(), mitk::CastToItkImage(), image, mitkCommandLineParser::Image, mitk::ImportItkImage(), mitkCommandLineParser::Input, mask, max(), MITK_INFO, mitkCommandLineParser::parseArguments(), mitk::IOUtil::Save(), mitkCommandLineParser::setArgumentPrefix(), mitkCommandLineParser::setCategory(), mitkCommandLineParser::setContributor(), mitkCommandLineParser::setDescription(), mitkCommandLineParser::setTitle(), and mitkCommandLineParser::StringList.