mitkNavigationDataReferenceTransformFilter.h

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/*===================================================================

The Medical Imaging Interaction Toolkit (MITK)

Copyright (c) German Cancer Research Center,
Division of Medical and Biological Informatics.
All rights reserved.

This software is distributed WITHOUT ANY WARRANTY; without
even the implied warranty of MERCHANTABILITY or FITNESS FOR
A PARTICULAR PURPOSE.

See LICENSE.txt or http://www.mitk.org for details.

===================================================================*/

#ifndef MITKNavigationDataReferenceTransformFilter_H_HEADER_INCLUDED_
#define MITKNavigationDataReferenceTransformFilter_H_HEADER_INCLUDED_

#include <mitkNavigationDataLandmarkTransformFilter.h>

#include <itkQuaternionRigidTransform.h>
#include <mitkPointSet.h>



namespace mitk {

  class MITKIGT_EXPORT NavigationDataReferenceTransformFilter : public NavigationDataLandmarkTransformFilter
  {
  public:
    mitkClassMacro(NavigationDataReferenceTransformFilter, NavigationDataToNavigationDataFilter);
    itkFactorylessNewMacro(Self)
    itkCloneMacro(Self)

    typedef itk::QuaternionRigidTransform<double> QuaternionTransformType; 

    void SetSourceNavigationDatas(const std::vector<mitk::NavigationData::Pointer>& sourceNavigationDatas);

    void SetTargetNavigationDatas(const std::vector<mitk::NavigationData::Pointer>& sourceNavigationDatas);

    void ReinitFilter();

    const mitk::PointSet::Pointer GetSourceLandmarks();
    const mitk::PointSet::Pointer GetTargetLandmarks();

    bool InitializeTransform();


  protected:

    NavigationDataReferenceTransformFilter();
    virtual ~NavigationDataReferenceTransformFilter();

    QuaternionTransformType::Pointer m_QuaternionTransform; 

    mitk::PointSet::Pointer CreateLandmarkPointsForSingleNavigationData(mitk::PointSet::Pointer landmarkContainer, const std::vector<mitk::NavigationData::Pointer>& navigationDatas);

    mitk::PointSet::Pointer m_SourceLandmarksFromNavigationDatas; 
    mitk::PointSet::Pointer m_TargetLandmarksFromNavigationDatas; 


  };
} // namespace mitk
#endif /* MITKNavigationDataReferenceTransformFilter_H_HEADER_INCLUDED_ */