#include <mitkTimeGeometry.h>

Inheritance diagram for mitk::TimeGeometry:

Collaboration diagram for mitk::TimeGeometry:

Public Types
typedef TimeGeometry	Self

typedef itk::Object	Superclass

typedef itk::SmartPointer< Self >	Pointer

typedef itk::SmartPointer< const Self >	ConstPointer

Public Member Functions
virtual std::vector< std::string >	GetClassHierarchy () const

virtual const char *	GetClassName () const

Pointer	Clone () const

	itkCreateAnotherMacro (Self) virtual TimeStepType CountTimeSteps() const =0
	Returns the number of time steps. More...

virtual TimePointType	GetMinimumTimePoint () const =0
	Returns the first time point for which the object is valid. More...

virtual TimePointType	GetMaximumTimePoint () const =0
	Returns the last time point for which the object is valid. More...

virtual TimePointType	GetMinimumTimePoint (TimeStepType step) const =0
	Returns the first time point for which the object is valid. More...

virtual TimePointType	GetMaximumTimePoint (TimeStepType step) const =0
	Returns the last time point for which the object is valid. More...

virtual TimeBounds	GetTimeBounds () const =0
	Get the time bounds (in ms) More...

virtual TimeBounds	GetTimeBounds (TimeStepType step) const =0
	Get the time bounds for the given TimeStep (in ms) More...

virtual bool	IsValidTimePoint (TimePointType timePoint) const =0
	Tests if a given time point is covered by this object. More...

virtual bool	IsValidTimeStep (TimeStepType timeStep) const =0
	Test for the given time step if a geometry is availible. More...

virtual TimePointType	TimeStepToTimePoint (TimeStepType timeStep) const =0
	Converts a time step to a time point. More...

virtual TimeStepType	TimePointToTimeStep (TimePointType timePoint) const =0
	Converts a time point to the corresponding time step. More...

virtual BaseGeometry::Pointer	GetGeometryForTimePoint (TimePointType timePoint) const =0
	Returns the geometry of a specific time point. More...

virtual BaseGeometry::Pointer	GetGeometryForTimeStep (TimeStepType timeStep) const =0
	Returns the geometry which corresponds to the given time step. More...

virtual BaseGeometry::Pointer	GetGeometryCloneForTimeStep (TimeStepType timeStep) const =0
	Returns a clone of the geometry of a specific time point. More...

virtual void	SetTimeStepGeometry (BaseGeometry *geometry, TimeStepType timeStep)=0
	Sets the geometry for a given time step. More...

virtual void	Expand (TimeStepType size)=0
	Expands to the given number of time steps. More...

virtual void	ReplaceTimeStepGeometries (const BaseGeometry *geometry)=0
	Replaces the geometry instances with clones ot the passed geometry. More...

virtual bool	IsValid () const =0
	Tests if all necessary informations are set and the object is valid. More...

Point3D	GetCornerPointInWorld (int id) const
	Get the position of the corner number id (in world coordinates) More...

Point3D	GetCornerPointInWorld (bool xFront=true, bool yFront=true, bool zFront=true) const
	Get the position of a corner (in world coordinates) More...

Point3D	GetCenterInWorld () const
	Get the center of the bounding-box in mm. More...

double	GetDiagonalLength2InWorld () const
	Get the squared length of the diagonal of the bounding-box in mm. More...

double	GetDiagonalLengthInWorld () const
	Get the length of the diagonal of the bounding-box in mm. More...

bool	IsWorldPointInside (const mitk::Point3D &p) const
	Test whether the point p (world coordinates in mm) is inside the bounding box. More...

void	UpdateBoundingBox ()
	Updates the bounding box to cover the area used in all time steps. More...

BoundingBox *	GetBoundingBoxInWorld () const
	Returns a bounding box that covers all time steps. More...

BoundingBox::BoundsArrayType	GetBoundsInWorld () const
	Returns the world bounds of the object that cover all time steps. More...

ScalarType	GetExtentInWorld (unsigned int direction) const
	Returns the Extend of the bounding in the given direction. More...

virtual void	Initialize ()
	Initializes the TimeGeometry. More...

void	Update ()
	Updates the geometry. More...

virtual void	UpdateWithoutBoundingBox ()
	Updates everything except the Bounding box. More...

virtual void	ExecuteOperation (Operation *op) override
	Executes the given operation on all time steps. More...

virtual void	PrintSelf (std::ostream &os, itk::Indent indent) const override

Public Member Functions inherited from mitk::OperationActor
	itkTypeMacroNoParent (OperationActor) virtual ~OperationActor()

Static Public Member Functions
static const char *	GetStaticNameOfClass ()

Protected Member Functions
	TimeGeometry ()

virtual	~TimeGeometry ()

virtual LightObject::Pointer	InternalClone () const override
	Makes a deep copy of the current object. More...

Protected Attributes
BoundingBox::Pointer	m_BoundingBox
	Contains a bounding box which includes all time steps. More...

Detailed Description

Definition at line 47 of file mitkTimeGeometry.h.

Member Typedef Documentation

typedef itk::SmartPointer<const Self> mitk::TimeGeometry::ConstPointer

Definition at line 64 of file mitkTimeGeometry.h.

typedef itk::SmartPointer<Self> mitk::TimeGeometry::Pointer

Definition at line 64 of file mitkTimeGeometry.h.

typedef TimeGeometry mitk::TimeGeometry::Self

Definition at line 64 of file mitkTimeGeometry.h.

typedef itk::Object mitk::TimeGeometry::Superclass

Definition at line 64 of file mitkTimeGeometry.h.

Constructor & Destructor Documentation

mitk::TimeGeometry::TimeGeometry ( )

protected

Definition at line 21 of file mitkTimeGeometry.cpp.

References m_BoundingBox, and mitk::New().

mitk::TimeGeometry::~TimeGeometry ( )

protectedvirtual

Definition at line 28 of file mitkTimeGeometry.cpp.

Member Function Documentation

Pointer mitk::TimeGeometry::Clone ( ) const

Referenced by mitk::BaseData::CopyInformation(), mitk::Tool::CreateEmptySegmentationNode(), mitk::Image::Image(), mitk::LabelSetImage::Initialize(), mitk::Image::Initialize(), mitk::RenderingManager::InitializeViews(), and mitk::BaseData::SetClonedTimeGeometry().

void mitk::TimeGeometry::ExecuteOperation ( mitk::Operation * op )

overridevirtual

Executes the given operation on all time steps.

Implements mitk::OperationActor.

Definition at line 163 of file mitkTimeGeometry.cpp.

Referenced by mitk::DisplayInteractor::Rotate(), and mitk::DisplayInteractor::Swivel().

virtual void mitk::TimeGeometry::Expand ( TimeStepType size )

pure virtual

Expands to the given number of time steps.

Expands to the given number of time steps. Each new created time step is filled with an empty geometry. Shrinking is not supported!

Implemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

BoundingBox* mitk::TimeGeometry::GetBoundingBoxInWorld ( ) const

inline

Returns a bounding box that covers all time steps.

Definition at line 265 of file mitkTimeGeometry.h.

Referenced by mitk::UnstructuredGrid::CalculateBoundingBox(), mitk::DataStorage::ComputeBoundingBox(), mitk::DataStorage::ComputeBoundingGeometry3D(), mitk::Equal(), mitk::RenderingManager::InitializeView(), mitk::SliceNavigationController::SetInputWorldTimeGeometry(), and mitk::BaseRenderer::SetWorldTimeGeometry().

BoundingBox::BoundsArrayType mitk::TimeGeometry::GetBoundsInWorld ( ) const

inline

Returns the world bounds of the object that cover all time steps.

Definition at line 269 of file mitkTimeGeometry.h.

Referenced by mitk::Equal().

mitk::Point3D mitk::TimeGeometry::GetCenterInWorld ( ) const

Get the center of the bounding-box in mm.

Definition at line 99 of file mitkTimeGeometry.cpp.

virtual std::vector<std::string> mitk::TimeGeometry::GetClassHierarchy ( ) const

inlinevirtual

Reimplemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

Definition at line 64 of file mitkTimeGeometry.h.

virtual const char* mitk::TimeGeometry::GetClassName ( ) const

virtual

Reimplemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

mitk::Point3D mitk::TimeGeometry::GetCornerPointInWorld ( int id ) const

Get the position of the corner number id (in world coordinates)

See SetImageGeometry for how a corner is defined on images.

Definition at line 40 of file mitkTimeGeometry.cpp.

References mitk::FillVector3D().

Referenced by mitk::DataStorage::ComputeBoundingBox(), mitk::DataStorage::ComputeBoundingGeometry3D(), mitk::BoundingObjectGroup::UpdateOutputInformation(), and mitk::ContourSet::UpdateOutputInformation().

mitk::Point3D mitk::TimeGeometry::GetCornerPointInWorld	(	bool	xFront = `true`,
		bool	yFront = `true`,
		bool	zFront = `true`
	)		const

Get the position of a corner (in world coordinates)

See SetImageGeometry for how a corner is defined on images.

Definition at line 86 of file mitkTimeGeometry.cpp.

double mitk::TimeGeometry::GetDiagonalLength2InWorld ( ) const

Get the squared length of the diagonal of the bounding-box in mm.

Definition at line 105 of file mitkTimeGeometry.cpp.

double mitk::TimeGeometry::GetDiagonalLengthInWorld ( ) const

Get the length of the diagonal of the bounding-box in mm.

Definition at line 111 of file mitkTimeGeometry.cpp.

mitk::ScalarType mitk::TimeGeometry::GetExtentInWorld ( unsigned int direction ) const

Returns the Extend of the bounding in the given direction.

Definition at line 149 of file mitkTimeGeometry.cpp.

Referenced by mitk::Cone::GetVolume(), mitk::Cylinder::GetVolume(), and mitk::Cuboid::GetVolume().

virtual BaseGeometry::Pointer mitk::TimeGeometry::GetGeometryCloneForTimeStep ( TimeStepType timeStep ) const

pure virtual

Returns a clone of the geometry of a specific time point.

If an invalid time step is given (e.g. no geometry is defined for this time step) a null-pointer will be returned.

Implemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

Referenced by mitk::Image::Initialize().

virtual BaseGeometry::Pointer mitk::TimeGeometry::GetGeometryForTimePoint ( TimePointType timePoint ) const

pure virtual

Returns the geometry of a specific time point.

Returns the geometry which defines the given time point. If the given time point is invalid an null-pointer is returned.

The pointer to the returned geometry may point to the saved geometry but this is not necessarily the case. So a change to the returned geometry may or may not afflict the geometry for the time point or all time points depending on the used implementation of TimeGeometry.

Implemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

virtual BaseGeometry::Pointer mitk::TimeGeometry::GetGeometryForTimeStep ( TimeStepType timeStep ) const

pure virtual

Returns the geometry which corresponds to the given time step.

Returns the geometry which defines the given time step. If the given time step is invalid an null-pointer is returned.

The pointer to the returned geometry may point to the saved geometry but this is not necessarily the case. So a change to the returned geometry may or may not afflict the geometry for the time step or all time steps depending on the used implementation of TimeGeometry.

Implemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

Referenced by mitk::Surface::CalculateBoundingBox(), mitk::UnstructuredGrid::CalculateBoundingBox(), mitk::TestDICOMLoading::DumpImageInformation(), mitk::Equal(), mitk::ExtractDirectedPlaneImageFilter::GenerateData(), mitk::HeightFieldSurfaceClipImageFilter::GenerateData(), mitk::ExtractSliceFilter::GenerateData(), mitk::LabelSetImageVtkMapper2D::GenerateDataForRenderer(), mitk::ImageVtkMapper2D::GenerateDataForRenderer(), mitk::DoseImageVtkMapper2D::GenerateDataForRenderer(), mitk::PlaneGeometryDataToSurfaceFilter::GenerateOutputInformation(), mitk::SegTool2D::GetAffectedImageSliceAs2DImage(), mitk::Image::Initialize(), QmitkSlicesInterpolator::OnAcceptInterpolationClicked(), mitk::GeometryClipImageFilter::SetClippingGeometry(), mitk::SurfaceToImageFilter::Stencil3DImage(), mitk::SurfaceStampImageFilter::SurfaceStamp(), QmitkSliceBasedInterpolatorWidget::TranslateAndInterpolateChangedSlice(), and QmitkSlicesInterpolator::TranslateAndInterpolateChangedSlice().

virtual TimePointType mitk::TimeGeometry::GetMaximumTimePoint ( ) const

pure virtual

Returns the last time point for which the object is valid.

Gives the last time point for which a valid geometrie is saved in this time geometry. The time point is given in ms.

Implemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

Referenced by mitk::Equal().

virtual TimePointType mitk::TimeGeometry::GetMaximumTimePoint ( TimeStepType step ) const

pure virtual

Returns the last time point for which the object is valid.

Gives the last time point for the Geometry specified by the given TimeStep. The time point is given in ms.

Implemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

virtual TimePointType mitk::TimeGeometry::GetMinimumTimePoint ( ) const

pure virtual

Returns the first time point for which the object is valid.

Returns the first valid time point for this geometry. If only one time steps available it usually goes from -max to +max. The time point is given in ms.

Implemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

Referenced by mitk::Equal().

virtual TimePointType mitk::TimeGeometry::GetMinimumTimePoint ( TimeStepType step ) const

pure virtual

Returns the first time point for which the object is valid.

Returns the first valid time point for the given TimeStep. The time point is given in ms.

Implemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

static const char* mitk::TimeGeometry::GetStaticNameOfClass ( )

inlinestatic

Definition at line 64 of file mitkTimeGeometry.h.

virtual TimeBounds mitk::TimeGeometry::GetTimeBounds ( ) const

pure virtual

Get the time bounds (in ms)

Implemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

Referenced by mitk::DataStorage::ComputeTimeBounds(), mitk::TestDCMLoading::DumpImageInformation(), mitk::TestDICOMLoading::DumpImageInformation(), and mitk::SurfaceVtkIO::GetPolyData().

virtual TimeBounds mitk::TimeGeometry::GetTimeBounds ( TimeStepType step ) const

pure virtual

Get the time bounds for the given TimeStep (in ms)

Implemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

void mitk::TimeGeometry::Initialize ( )

virtual

Initializes the TimeGeometry.

Reimplemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

Definition at line 32 of file mitkTimeGeometry.cpp.

itk::LightObject::Pointer mitk::TimeGeometry::InternalClone ( ) const

overrideprotectedvirtual

Makes a deep copy of the current object.

Reimplemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

Definition at line 184 of file mitkTimeGeometry.cpp.

References mitkThrow.

virtual bool mitk::TimeGeometry::IsValid ( ) const

pure virtual

Tests if all necessary informations are set and the object is valid.

Implemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

virtual bool mitk::TimeGeometry::IsValidTimePoint ( TimePointType timePoint ) const

pure virtual

Tests if a given time point is covered by this object.

Returns true if a geometry can be returned for the given time point and falls if not. The time point must be given in ms.

Implemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

virtual bool mitk::TimeGeometry::IsValidTimeStep ( TimeStepType timeStep ) const

pure virtual

Test for the given time step if a geometry is availible.

Returns true if a geometry is defined for the given time step. Otherwise false is returned. The time step is defined as positiv number.

Implemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

Referenced by mitk::ExtractDirectedPlaneImageFilter::GenerateData(), mitk::ExtractSliceFilter::GenerateData(), mitk::GenerateTimeInInputRegion(), mitk::VectorImageMapper2D::GetCurrentTimeStep(), mitk::SurfaceVtkIO::GetPolyData(), mitk::MeshMapper2D::Paint(), mitk::InteractionTestHelper::SetTimeStep(), mitk::ContourModelMapper2D::Update(), mitk::ContourModelMapper3D::Update(), mitk::LabelSetImageVtkMapper2D::Update(), mitk::RegEvaluationMapper2D::Update(), mitk::Mapper::Update(), mitk::ImageVtkMapper2D::Update(), mitk::DoseImageVtkMapper2D::Update(), and mitk::SurfaceVtkMapper2D::Update().

bool mitk::TimeGeometry::IsWorldPointInside ( const mitk::Point3D & p ) const

Test whether the point p (world coordinates in mm) is inside the bounding box.

Definition at line 116 of file mitkTimeGeometry.cpp.

mitk::TimeGeometry::itkCreateAnotherMacro ( Self ) const

pure virtual

Returns the number of time steps.

Returns the number of time steps for which geometries are saved. The number of time steps is also the upper bound of the time steps. The minimum time steps is always 0.

void mitk::TimeGeometry::PrintSelf	(	std::ostream &	os,
		itk::Indent	indent
	)		const

overridevirtual

Reimplemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

Definition at line 171 of file mitkTimeGeometry.cpp.

virtual void mitk::TimeGeometry::ReplaceTimeStepGeometries ( const BaseGeometry * geometry )

pure virtual

Replaces the geometry instances with clones ot the passed geometry.

Replaces the geometries of all time steps with clones of the passed geometry. Replacment strategy depends on the implementation of TimeGeometry sub class.

Remarks: The time points itself stays untouched. Use this method if you want to change the spatial properties of a TimeGeometry and preserve the time "grid".

Implemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

virtual void mitk::TimeGeometry::SetTimeStepGeometry	(	BaseGeometry *	geometry,
		TimeStepType	timeStep
	)

pure virtual

Sets the geometry for a given time step.

Sets the geometry for the given time steps. This may also afflects other time steps, depending on the implementation of TimeGeometry.

Implemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

virtual TimeStepType mitk::TimeGeometry::TimePointToTimeStep ( TimePointType timePoint ) const

pure virtual

Converts a time point to the corresponding time step.

Converts a time point to a time step in a way that the new time step indicates the same geometry as the time point. If a negativ invalid time point is given always time step 0 is returned. If an positiv invalid time step is given an invalid time step will be returned.

Implemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

Referenced by mitk::RGBToRGBACastImageFilter::GenerateData(), mitk::BoundingObjectCutter::GenerateData(), mitk::MaskImageFilter::GenerateData(), mitk::HeightFieldSurfaceClipImageFilter::GenerateData(), mitk::GeometryClipImageFilter::GenerateData(), mitk::SurfaceVtkMapper2D::GenerateDataForRenderer(), mitk::GenerateTimeInInputRegion(), mitk::VectorImageMapper2D::GetCurrentTimeStep(), mitk::BaseRenderer::GetTimeStep(), mitkSurfaceTest(), mitk::MeshMapper2D::Paint(), and mitk::SurfaceStampImageFilter::SurfaceStamp().

virtual TimePointType mitk::TimeGeometry::TimeStepToTimePoint ( TimeStepType timeStep ) const

pure virtual

Converts a time step to a time point.

Converts a time step to a time point in a way that the new time point indicates the same geometry as the time step. If the original time steps does not point to a valid geometry, a time point is calculated that also does not point to a valid geometry, but no exception is raised.

Implemented in mitk::ArbitraryTimeGeometry, and mitk::ProportionalTimeGeometry.

Referenced by mitk::Equal(), mitk::RGBToRGBACastImageFilter::GenerateData(), mitk::BoundingObjectCutter::GenerateData(), mitk::MaskImageFilter::GenerateData(), mitk::HeightFieldSurfaceClipImageFilter::GenerateData(), mitk::GeometryClipImageFilter::GenerateData(), mitk::GenerateTimeInInputRegion(), mitk::SliceNavigationController::SetGeometryTime(), mitk::SurfaceToImageFilter::Stencil3DImage(), and mitk::SurfaceStampImageFilter::SurfaceStamp().

void mitk::TimeGeometry::Update ( )

Updates the geometry.

Definition at line 157 of file mitkTimeGeometry.cpp.

Referenced by mitk::BoundingObject::BoundingObject(), mitk::Surface::CalculateBoundingBox(), mitk::UnstructuredGrid::CalculateBoundingBox(), and mitk::SlicedData::SetSpacing().

void mitk::TimeGeometry::UpdateBoundingBox ( )

Updates the bounding box to cover the area used in all time steps.

The bounding box is updated by this method. The new bounding box covers an area which includes all bounding boxes during all times steps.

Definition at line 121 of file mitkTimeGeometry.cpp.

References mitk::New().

virtual void mitk::TimeGeometry::UpdateWithoutBoundingBox ( )

inlinevirtual

Updates everything except the Bounding box.

This class should be overwritten by child classes. The method is called when Update() is required.

Definition at line 291 of file mitkTimeGeometry.h.

Member Data Documentation

BoundingBox::Pointer mitk::TimeGeometry::m_BoundingBox

protected

Contains a bounding box which includes all time steps.

Definition at line 56 of file mitkTimeGeometry.h.

Referenced by TimeGeometry().

The documentation for this class was generated from the following files:

Public Types

Public Member Functions

Static Public Member Functions

Protected Member Functions

Protected Attributes

Detailed Description

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation