mitk::DicomDiffusionImageHeaderReader Class Reference

Reads the header information from a DICOM series and stores it into an output object of type DiffusionImageHeaderInformation. More...

#include <mitkDicomDiffusionImageHeaderReader.h>

Inheritance diagram for mitk::DicomDiffusionImageHeaderReader:

Collaboration diagram for mitk::DicomDiffusionImageHeaderReader:

Public Types
enum	SupportedVendors {   SV_SIEMENS, SV_SIEMENS_MOSAIC, SV_PHILIPS, SV_GE,   SV_UNKNOWN_VENDOR }
typedef std::vector< std::string >	FileNamesContainer
typedef short	PixelValueType
typedef itk::Image< PixelValueType, 2 >	SliceType
typedef itk::Image< PixelValueType, 3 >	VolumeType
typedef itk::ImageSeriesReader< VolumeType >	VolumeReaderType
typedef itk::ImageFileReader< SliceType >	SliceReaderType
typedef itk::GDCMImageIO	ImageIOType

Public Member Functions
	mitkClassMacroItkParent (DicomDiffusionImageHeaderReader, itk::Object)
Pointer	Clone () const
void	SetSeriesDicomFilenames (FileNamesContainer dicomFilenames)
void	SetGdcmIO (ImageIOType::Pointer gdcmIO)
void	SetVolumeReader (VolumeReaderType::Pointer volumeReader)
void	SetOutputPointer (DiffusionImageHeaderInformation::Pointer output)
virtual void	Update ()
DiffusionImageHeaderInformation::Pointer	GetOutput ()
SupportedVendors	GetVendorID ()

Static Public Member Functions
static Pointer	New ()

Protected Member Functions
	DicomDiffusionImageHeaderReader ()
virtual	~DicomDiffusionImageHeaderReader ()
void	ReadPublicTags ()
void	ReadPublicTags2 ()
void	TransformGradients ()

Protected Attributes
FileNamesContainer	m_DicomFilenames
DiffusionImageHeaderInformation::Pointer	m_Output
ImageIOType::Pointer	m_GdcmIO
VolumeReaderType::Pointer	m_VolumeReader
bool	m_SliceOrderIS
bool	m_SingleSeries
int	m_nSlice
std::vector< float >	m_sliceLocations

Detailed Description

Reads the header information from a DICOM series and stores it into an output object of type DiffusionImageHeaderInformation.

Definition at line 36 of file mitkDicomDiffusionImageHeaderReader.h.

Member Typedef Documentation

typedef std::vector< std::string > mitk::DicomDiffusionImageHeaderReader::FileNamesContainer

Definition at line 53 of file mitkDicomDiffusionImageHeaderReader.h.

typedef itk::GDCMImageIO mitk::DicomDiffusionImageHeaderReader::ImageIOType

Definition at line 60 of file mitkDicomDiffusionImageHeaderReader.h.

typedef short mitk::DicomDiffusionImageHeaderReader::PixelValueType

Definition at line 55 of file mitkDicomDiffusionImageHeaderReader.h.

typedef itk::ImageFileReader< SliceType > mitk::DicomDiffusionImageHeaderReader::SliceReaderType

Definition at line 59 of file mitkDicomDiffusionImageHeaderReader.h.

typedef itk::Image< PixelValueType, 2 > mitk::DicomDiffusionImageHeaderReader::SliceType

Definition at line 56 of file mitkDicomDiffusionImageHeaderReader.h.

typedef itk::ImageSeriesReader< VolumeType > mitk::DicomDiffusionImageHeaderReader::VolumeReaderType

Definition at line 58 of file mitkDicomDiffusionImageHeaderReader.h.

typedef itk::Image< PixelValueType, 3 > mitk::DicomDiffusionImageHeaderReader::VolumeType

Definition at line 57 of file mitkDicomDiffusionImageHeaderReader.h.

Member Enumeration Documentation

enum mitk::DicomDiffusionImageHeaderReader::SupportedVendors

En enum to distinguish in processing between the different vendoors

Enumerator
SV_SIEMENS
SV_SIEMENS_MOSAIC
SV_PHILIPS
SV_GE
SV_UNKNOWN_VENDOR

Definition at line 45 of file mitkDicomDiffusionImageHeaderReader.h.

Constructor & Destructor Documentation

mitk::DicomDiffusionImageHeaderReader::DicomDiffusionImageHeaderReader ( )

protected

Default c'tor

Definition at line 49 of file mitkDicomDiffusionImageHeaderReader.cpp.

References m_SingleSeries, and m_SliceOrderIS.

mitk::DicomDiffusionImageHeaderReader::~DicomDiffusionImageHeaderReader ( )

protectedvirtual

Default d'tor

Definition at line 55 of file mitkDicomDiffusionImageHeaderReader.cpp.

Member Function Documentation

Pointer mitk::DicomDiffusionImageHeaderReader::Clone

(

)

const

mitk::DiffusionImageHeaderInformation::Pointer mitk::DicomDiffusionImageHeaderReader::GetOutput

(

void

)

return output

Definition at line 200 of file mitkDicomDiffusionImageHeaderReader.cpp.

mitk::DicomDiffusionImageHeaderReader::SupportedVendors mitk::DicomDiffusionImageHeaderReader::GetVendorID

(

)

identify vendor

Definition at line 60 of file mitkDicomDiffusionImageHeaderReader.cpp.

References mitk::New().

mitk::DicomDiffusionImageHeaderReader::mitkClassMacroItkParent	(	DicomDiffusionImageHeaderReader	,
		itk::Object
	)

static Pointer mitk::DicomDiffusionImageHeaderReader::New ( )

static

void mitk::DicomDiffusionImageHeaderReader::ReadPublicTags ( )

protected

Definition at line 205 of file mitkDicomDiffusionImageHeaderReader.cpp.

References InsertUnique().

void mitk::DicomDiffusionImageHeaderReader::ReadPublicTags2 ( )

protected

Definition at line 308 of file mitkDicomDiffusionImageHeaderReader.cpp.

void mitk::DicomDiffusionImageHeaderReader::SetGdcmIO ( ImageIOType::Pointer  gdcmIO )

inline

Definition at line 66 of file mitkDicomDiffusionImageHeaderReader.h.

void mitk::DicomDiffusionImageHeaderReader::SetOutputPointer ( DiffusionImageHeaderInformation::Pointer  output )

inline

Set the output object that will contain the read-in information after update

Definition at line 74 of file mitkDicomDiffusionImageHeaderReader.h.

void mitk::DicomDiffusionImageHeaderReader::SetSeriesDicomFilenames ( FileNamesContainer  dicomFilenames )

inline

Set the dicom file names to be considered

Definition at line 63 of file mitkDicomDiffusionImageHeaderReader.h.

void mitk::DicomDiffusionImageHeaderReader::SetVolumeReader ( VolumeReaderType::Pointer  volumeReader )

inline

Set the volume reader in case the default volume reader shouldn't be used

Definition at line 70 of file mitkDicomDiffusionImageHeaderReader.h.

void mitk::DicomDiffusionImageHeaderReader::TransformGradients ( )

protected

Definition at line 320 of file mitkDicomDiffusionImageHeaderReader.cpp.

void mitk::DicomDiffusionImageHeaderReader::Update ( )

virtual

do the work

Reimplemented in mitk::SiemensDicomDiffusionImageHeaderReader, mitk::SiemensMosaicDicomDiffusionImageHeaderReader, mitk::PhilipsDicomDiffusionImageHeaderReader, and mitk::GEDicomDiffusionImageHeaderReader.

Definition at line 126 of file mitkDicomDiffusionImageHeaderReader.cpp.

References mitk::GEDicomDiffusionImageHeaderReader::New(), mitk::PhilipsDicomDiffusionImageHeaderReader::New(), mitk::SiemensMosaicDicomDiffusionImageHeaderReader::New(), mitk::SiemensDicomDiffusionImageHeaderReader::New(), and mitk::DiffusionImageHeaderInformation::New().

Member Data Documentation

FileNamesContainer mitk::DicomDiffusionImageHeaderReader::m_DicomFilenames

protected

Definition at line 97 of file mitkDicomDiffusionImageHeaderReader.h.

ImageIOType::Pointer mitk::DicomDiffusionImageHeaderReader::m_GdcmIO

protected

Definition at line 100 of file mitkDicomDiffusionImageHeaderReader.h.

int mitk::DicomDiffusionImageHeaderReader::m_nSlice

protected

Definition at line 105 of file mitkDicomDiffusionImageHeaderReader.h.

DiffusionImageHeaderInformation::Pointer mitk::DicomDiffusionImageHeaderReader::m_Output

protected

Definition at line 98 of file mitkDicomDiffusionImageHeaderReader.h.

bool mitk::DicomDiffusionImageHeaderReader::m_SingleSeries

protected

Definition at line 104 of file mitkDicomDiffusionImageHeaderReader.h.

Referenced by DicomDiffusionImageHeaderReader().

std::vector<float> mitk::DicomDiffusionImageHeaderReader::m_sliceLocations

protected

Definition at line 106 of file mitkDicomDiffusionImageHeaderReader.h.

bool mitk::DicomDiffusionImageHeaderReader::m_SliceOrderIS

protected

Definition at line 103 of file mitkDicomDiffusionImageHeaderReader.h.

Referenced by DicomDiffusionImageHeaderReader().

VolumeReaderType::Pointer mitk::DicomDiffusionImageHeaderReader::m_VolumeReader

protected

Definition at line 101 of file mitkDicomDiffusionImageHeaderReader.h.

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The documentation for this class was generated from the following files:

• mitkDicomDiffusionImageHeaderReader.h
• mitkDicomDiffusionImageHeaderReader.cpp