mitk::DicomDiffusionImageReader< TPixelType, TDimension > Class Template Reference

Reads in the image data stored as DICOM series. The series is specified by a HeaderContainer. More...

#include <mitkDicomDiffusionImageReader.h>

Inheritance diagram for mitk::DicomDiffusionImageReader< TPixelType, TDimension >:

Collaboration diagram for mitk::DicomDiffusionImageReader< TPixelType, TDimension >:

Public Types
typedef itk::VectorImage< TPixelType, TDimension >	OutputImageType
typedef itk::Image< TPixelType, TDimension >	InputImageType
typedef itk::ImageSource< OutputImageType >	ImageSourceType
typedef OutputImageType::SizeType	SizeType
typedef OutputImageType::RegionType	ImageRegionType
typedef std::vector< DiffusionImageHeaderInformation::Pointer >	HeaderContainer

Public Member Functions
	mitkClassMacro (DicomDiffusionImageReader, ImageSourceType)
Pointer	Clone () const
void	SetHeaders (const HeaderContainer &headers)
const HeaderContainer &	GetHeaders () const
virtual void	GenerateOutputInformation (void)
virtual void	EnlargeOutputRequestedRegion (itk::DataObject *output)

Static Public Member Functions
static Pointer	New ()

Protected Member Functions
void	PrintSelf (std::ostream &os, itk::Indent indent) const
virtual void	GenerateData ()

Protected Attributes
HeaderContainer	m_Headers
int	m_NumberOfDimensionsInImage

Detailed Description

template<class TPixelType, const int TDimension>
class mitk::DicomDiffusionImageReader< TPixelType, TDimension >

Reads in the image data stored as DICOM series. The series is specified by a HeaderContainer.

Definition at line 33 of file mitkDicomDiffusionImageReader.h.

Member Typedef Documentation

template<class TPixelType , const int TDimension>

typedef std::vector<DiffusionImageHeaderInformation::Pointer> mitk::DicomDiffusionImageReader< TPixelType, TDimension >::HeaderContainer

Definition at line 52 of file mitkDicomDiffusionImageReader.h.

template<class TPixelType , const int TDimension>

typedef OutputImageType::RegionType mitk::DicomDiffusionImageReader< TPixelType, TDimension >::ImageRegionType

The region of the output image.

Definition at line 50 of file mitkDicomDiffusionImageReader.h.

template<class TPixelType , const int TDimension>

typedef itk::ImageSource< OutputImageType > mitk::DicomDiffusionImageReader< TPixelType, TDimension >::ImageSourceType

Definition at line 39 of file mitkDicomDiffusionImageReader.h.

template<class TPixelType , const int TDimension>

typedef itk::Image<TPixelType, TDimension > mitk::DicomDiffusionImageReader< TPixelType, TDimension >::InputImageType

Definition at line 38 of file mitkDicomDiffusionImageReader.h.

template<class TPixelType , const int TDimension>

typedef itk::VectorImage< TPixelType, TDimension > mitk::DicomDiffusionImageReader< TPixelType, TDimension >::OutputImageType

Definition at line 37 of file mitkDicomDiffusionImageReader.h.

template<class TPixelType , const int TDimension>

typedef OutputImageType::SizeType mitk::DicomDiffusionImageReader< TPixelType, TDimension >::SizeType

The size of the output image.

Definition at line 47 of file mitkDicomDiffusionImageReader.h.

Member Function Documentation

template<class TPixelType , const int TDimension>

Pointer mitk::DicomDiffusionImageReader< TPixelType, TDimension >::Clone

(

)

const

template<class TPixelType , const int TDimension>

void mitk::DicomDiffusionImageReader< TPixelType, TDimension >::EnlargeOutputRequestedRegion ( itk::DataObject *  output )

virtual

Give the reader a chance to indicate that it will produce more output than it was requested to produce. ImageSeriesReader cannot currently read a portion of an image (since the ImageIO objects cannot read a portion of an image), so the ImageSeriesReader must enlarge the RequestedRegion to the size of the image on disk.

Definition at line 75 of file mitkDicomDiffusionImageReader.cpp.

template<class TPixelType , const int TDimension>

void mitk::DicomDiffusionImageReader< TPixelType, TDimension >::GenerateData ( )

protectedvirtual

Does the real work.

Definition at line 84 of file mitkDicomDiffusionImageReader.cpp.

References MITK_INFO, and mitk::New().

template<class TPixelType , const int TDimension>

void mitk::DicomDiffusionImageReader< TPixelType, TDimension >::GenerateOutputInformation ( void  )

virtual

Prepare the allocation of the output image during the first back propagation of the pipeline.

Definition at line 38 of file mitkDicomDiffusionImageReader.cpp.

References mitk::New().

template<class TPixelType , const int TDimension>

const HeaderContainer& mitk::DicomDiffusionImageReader< TPixelType, TDimension >::GetHeaders ( ) const

inline

Definition at line 64 of file mitkDicomDiffusionImageReader.h.

References mitk::DicomDiffusionImageReader< TPixelType, TDimension >::m_Headers.

template<class TPixelType , const int TDimension>

mitk::DicomDiffusionImageReader< TPixelType, TDimension >::mitkClassMacro	(	DicomDiffusionImageReader< TPixelType, TDimension >	,
		ImageSourceType
	)

template<class TPixelType , const int TDimension>

static Pointer mitk::DicomDiffusionImageReader< TPixelType, TDimension >::New ( )

static

template<class TPixelType , const int TDimension>

void mitk::DicomDiffusionImageReader< TPixelType, TDimension >::PrintSelf ( std::ostream &  os, itk::Indent  indent  ) const

protected

Definition at line 30 of file mitkDicomDiffusionImageReader.cpp.

template<class TPixelType , const int TDimension>

void mitk::DicomDiffusionImageReader< TPixelType, TDimension >::SetHeaders ( const HeaderContainer &  headers )

inline

Set the vector of strings that contains the file names. Files are processed in sequential order.

Definition at line 56 of file mitkDicomDiffusionImageReader.h.

References mitk::DicomDiffusionImageReader< TPixelType, TDimension >::m_Headers.

Member Data Documentation

template<class TPixelType , const int TDimension>

HeaderContainer mitk::DicomDiffusionImageReader< TPixelType, TDimension >::m_Headers

protected

A list of filenames to be processed.

Definition at line 87 of file mitkDicomDiffusionImageReader.h.

Referenced by mitk::DicomDiffusionImageReader< TPixelType, TDimension >::GetHeaders(), and mitk::DicomDiffusionImageReader< TPixelType, TDimension >::SetHeaders().

template<class TPixelType , const int TDimension>

int mitk::DicomDiffusionImageReader< TPixelType, TDimension >::m_NumberOfDimensionsInImage

protected

The number of independent variables in the images that comprise the series.

Definition at line 91 of file mitkDicomDiffusionImageReader.h.

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The documentation for this class was generated from the following files:

• mitkDicomDiffusionImageReader.h
• mitkDicomDiffusionImageReader.cpp