mitkGIFNeighbouringGreyLevelDependenceFeatures.h

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/*============================================================================

The Medical Imaging Interaction Toolkit (MITK)

Copyright (c) German Cancer Research Center (DKFZ)
All rights reserved.

Use of this source code is governed by a 3-clause BSD license that can be
found in the LICENSE file.

============================================================================*/

#ifndef mitkGIFNeighbouringGreyLevelDependenceFeatures_h
#define mitkGIFNeighbouringGreyLevelDependenceFeatures_h

#include <mitkAbstractGlobalImageFeature.h>
#include <mitkBaseData.h>
#include <MitkCLUtilitiesExports.h>

#include <Eigen/src/Core/Array.h>

namespace mitk
{
  class MITKCLUTILITIES_EXPORT GIFNeighbouringGreyLevelDependenceFeature : public AbstractGlobalImageFeature
  {
  public:
    mitkClassMacro(GIFNeighbouringGreyLevelDependenceFeature, AbstractGlobalImageFeature);
    itkFactorylessNewMacro(Self);
    itkCloneMacro(Self);

    GIFNeighbouringGreyLevelDependenceFeature();

    FeatureListType CalculateFeatures(const Image* image, const Image* mask, const Image* maskNoNAN) override;
    using Superclass::CalculateFeatures;

    itkGetConstMacro(Ranges, std::vector<double>);
    void SetRanges(std::vector<double> ranges);
    void SetRange(double range);
    itkGetConstMacro(Alpha, int);
    itkSetMacro(Alpha, int);

    void AddArguments(mitkCommandLineParser& parser) const override;

  protected:
    std::string GenerateLegacyFeatureEncoding(const FeatureID& id) const override;

    FeatureListType DoCalculateFeatures(const Image* image, const Image* mask) override;

    void ConfigureSettingsByParameters(const ParametersType& parameters) override;

  private:
    std::vector<double> m_Ranges;
    int m_Alpha;
  };

}
#endif //mitkGIFNeighbouringGreyLevelDependenceFeature_h