Medical Imaging Interaction Toolkit  2022.04.99-b878213f
Medical Imaging Interaction Toolkit
mitkGIFCooccurenceMatrix2.h
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1 /*============================================================================
2 
3 The Medical Imaging Interaction Toolkit (MITK)
4 
5 Copyright (c) German Cancer Research Center (DKFZ)
6 All rights reserved.
7 
8 Use of this source code is governed by a 3-clause BSD license that can be
9 found in the LICENSE file.
10 
11 ============================================================================*/
12 
13 #ifndef mitkGIFCooccurenceMatrix2_h
14 #define mitkGIFCooccurenceMatrix2_h
15 
17 #include <mitkBaseData.h>
18 #include <MitkCLUtilitiesExports.h>
19 
20 #include <Eigen/src/Core/Array.h>
21 
22 namespace mitk
23 {
24 
133  {
134  public:
136  itkFactorylessNewMacro(Self);
137  itkCloneMacro(Self);
138 
140 
141  FeatureListType CalculateFeatures(const Image* image, const Image* mask, const Image* maskNoNAN) override;
142  using Superclass::CalculateFeatures;
143 
144  itkGetConstMacro(Ranges, std::vector<double>);
145  void SetRanges(std::vector<double> ranges);
146  void SetRange(double range);
147 
148  void AddArguments(mitkCommandLineParser& parser) const override;
149 
150  protected:
151  std::string GenerateLegacyFeatureEncoding(const FeatureID& id) const override;
152 
153  FeatureListType DoCalculateFeatures(const Image* image, const Image* mask) override;
154 
155  void ConfigureSettingsByParameters(const ParametersType& parameters) override;
156 
157  private:
158  std::vector<double> m_Ranges;
159  };
160 
161 }
162 #endif //mitkGIFCooccurenceMatrix2_h
Base of all data objects.
Definition: mitkBaseData.h:42
DataCollection - Class to facilitate loading/accessing structured data.
Calculates features based on the co-occurence matrix.
#define mitkClassMacro(className, SuperClassName)
Definition: mitkCommon.h:36
Image class for storing images.
Definition: mitkImage.h:69
std::vector< std::pair< FeatureID, double > > FeatureListType
#define MITKCLUTILITIES_EXPORT