mitkDICOMPMIO.h

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/*============================================================================
 
The Medical Imaging Interaction Toolkit (MITK)
 
Copyright (c) German Cancer Research Center (DKFZ)
All rights reserved.
 
Use of this source code is governed by a 3-clause BSD license that can be
found in the LICENSE file.
 
============================================================================*/
 
#ifndef mitkDICOMPMIO_h
#define mitkDICOMPMIO_h
 
#include <mitkAbstractFileIO.h>
#include <mitkImage.h>
#include <dcmtk/dcmpmap/dpmparametricmapiod.h>
#include <dcmqi/JSONSegmentationMetaInformationHandler.h>
#include <dcmqi/JSONParametricMapMetaInformationHandler.h>
 
 
namespace mitk
{
  class DICOMPMIO : public mitk::AbstractFileIO
  {
  public:
 
 
    DICOMPMIO();
 
    // -------------- AbstractFileReader -------------
 
    using AbstractFileReader::Read;
 
    ConfidenceLevel GetReaderConfidenceLevel() const override;
 
    // -------------- AbstractFileWriter -------------
 
    void Write() override;
    ConfidenceLevel GetWriterConfidenceLevel() const override;
  protected:
    std::vector<itk::SmartPointer<BaseData>> DoRead() override;
 
  private:
 
    typedef mitk::Image PMInputType;
    typedef itk::Image<double, 3> PMitkInputImageType;
    typedef IODFloatingPointImagePixelModule::value_type PMFloatPixelType; // input type required for DCMQI
    typedef itk::Image<PMFloatPixelType, 3> PMitkInternalImageType;
    DICOMPMIO *IOClone() const override;
 
    // -------------- DICOMPMIO specific functions -------------
 
        const std::string CreateMetaDataJsonFilePM() const;
 
  };
} // end of namespace mitk
 
#endif