Medical Imaging Interaction Toolkit  2018.4.99-389bf124
Medical Imaging Interaction Toolkit
Public Member Functions | Static Public Member Functions | Protected Member Functions | Protected Attributes | List of all members
mitk::PointSetStatisticsCalculator Class Reference

Class for calculating statistics (like standard derivation, RMS, mean, etc.) for a PointSet. More...

#include <mitkPointSetStatisticsCalculator.h>

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Public Member Functions

 mitkClassMacroItkParent (PointSetStatisticsCalculator, itk::Object)
 
Pointer Clone () const
 
 mitkNewMacro1Param (PointSetStatisticsCalculator, mitk::PointSet::Pointer)
 
void SetPointSet (mitk::PointSet::Pointer pSet)
 Sets the point set which will be analysed. More...
 
mitk::Point3D GetPositionMean ()
 
mitk::Vector3D GetPositionStandardDeviation ()
 
mitk::Vector3D GetPositionSampleStandardDeviation ()
 
double GetPositionErrorMean ()
 
double GetPositionErrorStandardDeviation ()
 
double GetPositionErrorSampleStandardDeviation ()
 
double GetPositionErrorRMS ()
 
double GetPositionErrorMedian ()
 
double GetPositionErrorMax ()
 
double GetPositionErrorMin ()
 
double GetStabw (std::vector< double > list)
 
double GetSampleStabw (std::vector< double > list)
 

Static Public Member Functions

static Pointer New ()
 

Protected Member Functions

 PointSetStatisticsCalculator ()
 
 PointSetStatisticsCalculator (mitk::PointSet::Pointer)
 
 ~PointSetStatisticsCalculator () override
 
std::vector< double > GetErrorList (std::vector< mitk::Point3D > list)
 
mitk::Point3D GetMean (std::vector< mitk::Point3D > list)
 
std::vector< mitk::Point3D > PointSetToVector (mitk::PointSet::Pointer pSet)
 Converts a point set to a vector of Point3D. More...
 
bool CheckIfAllPositionsAreEqual ()
 
double GetMean (std::vector< double > list)
 
double GetMedian (std::vector< double > list)
 
double GetMax (std::vector< double > list)
 
double GetMin (std::vector< double > list)
 

Protected Attributes

mitk::PointSet::Pointer m_PointSet
 

Detailed Description

Class for calculating statistics (like standard derivation, RMS, mean, etc.) for a PointSet.

Definition at line 27 of file mitkPointSetStatisticsCalculator.h.

Constructor & Destructor Documentation

◆ PointSetStatisticsCalculator() [1/2]

mitk::PointSetStatisticsCalculator::PointSetStatisticsCalculator ( )
protected

Definition at line 16 of file mitkPointSetStatisticsCalculator.cpp.

References m_PointSet, and mitk::PointSet::New().

◆ PointSetStatisticsCalculator() [2/2]

mitk::PointSetStatisticsCalculator::PointSetStatisticsCalculator ( mitk::PointSet::Pointer  pSet)
explicitprotected

Definition at line 21 of file mitkPointSetStatisticsCalculator.cpp.

References m_PointSet.

◆ ~PointSetStatisticsCalculator()

mitk::PointSetStatisticsCalculator::~PointSetStatisticsCalculator ( )
overrideprotected

Definition at line 26 of file mitkPointSetStatisticsCalculator.cpp.

Member Function Documentation

◆ CheckIfAllPositionsAreEqual()

bool mitk::PointSetStatisticsCalculator::CheckIfAllPositionsAreEqual ( )
protected
Returns
Returns true if all positions in the evaluated points set are equal. False if not.

Definition at line 281 of file mitkPointSetStatisticsCalculator.cpp.

References m_PointSet.

Referenced by GetErrorList(), GetPositionErrorMean(), GetPositionErrorRMS(), GetPositionSampleStandardDeviation(), and GetPositionStandardDeviation().

◆ Clone()

Pointer mitk::PointSetStatisticsCalculator::Clone ( ) const

◆ GetErrorList()

std::vector< double > mitk::PointSetStatisticsCalculator::GetErrorList ( std::vector< mitk::Point3D >  list)
protected
Returns
Returns a list with the distances to the mean of the list

Definition at line 211 of file mitkPointSetStatisticsCalculator.cpp.

References CheckIfAllPositionsAreEqual(), and GetMean().

Referenced by GetPositionErrorMax(), GetPositionErrorMedian(), GetPositionErrorMin(), GetPositionErrorSampleStandardDeviation(), and GetPositionErrorStandardDeviation().

◆ GetMax()

double mitk::PointSetStatisticsCalculator::GetMax ( std::vector< double >  list)
protected

Definition at line 43 of file mitkPointSetStatisticsCalculator.cpp.

Referenced by GetPositionErrorMax().

◆ GetMean() [1/2]

mitk::Point3D mitk::PointSetStatisticsCalculator::GetMean ( std::vector< mitk::Point3D >  list)
protected
Returns
Returns the mean of the point list. Returns [0;0;0] if the list is empty.

Definition at line 115 of file mitkPointSetStatisticsCalculator.cpp.

Referenced by GetErrorList(), GetPositionErrorMean(), GetPositionErrorRMS(), GetPositionMean(), GetSampleStabw(), and GetStabw().

◆ GetMean() [2/2]

double mitk::PointSetStatisticsCalculator::GetMean ( std::vector< double >  list)
protected

Definition at line 87 of file mitkPointSetStatisticsCalculator.cpp.

◆ GetMedian()

double mitk::PointSetStatisticsCalculator::GetMedian ( std::vector< double >  list)
protected

Definition at line 99 of file mitkPointSetStatisticsCalculator.cpp.

Referenced by GetPositionErrorMedian().

◆ GetMin()

double mitk::PointSetStatisticsCalculator::GetMin ( std::vector< double >  list)
protected

Definition at line 50 of file mitkPointSetStatisticsCalculator.cpp.

Referenced by GetPositionErrorMin().

◆ GetPositionErrorMax()

double mitk::PointSetStatisticsCalculator::GetPositionErrorMax ( )
Returns
Returns the maximum of the errors of all positions of the analysed point set (only valid navigation data). Returns 0 if there is no valid navigation data.

Definition at line 201 of file mitkPointSetStatisticsCalculator.cpp.

References GetErrorList(), GetMax(), m_PointSet, and PointSetToVector().

◆ GetPositionErrorMean()

double mitk::PointSetStatisticsCalculator::GetPositionErrorMean ( )
Returns
Returns the mean distance to the mean postion (=mean error) of the analysed point set (only valid navigation data). Returns 0 if there is no valid navigation data.

Definition at line 142 of file mitkPointSetStatisticsCalculator.cpp.

References CheckIfAllPositionsAreEqual(), GetMean(), m_PointSet, and PointSetToVector().

◆ GetPositionErrorMedian()

double mitk::PointSetStatisticsCalculator::GetPositionErrorMedian ( )
Returns
Returns the median of the errors of all positions of the analysed point set (only valid navigation data). Returns 0 if there is no valid navigation data.

Definition at line 196 of file mitkPointSetStatisticsCalculator.cpp.

References GetErrorList(), GetMedian(), m_PointSet, and PointSetToVector().

◆ GetPositionErrorMin()

double mitk::PointSetStatisticsCalculator::GetPositionErrorMin ( )
Returns
Returns the minimum of the errors of all positions of the analysed point set (only valid navigation data). Returns 0 if there is no valid navigation data.

Definition at line 206 of file mitkPointSetStatisticsCalculator.cpp.

References GetErrorList(), GetMin(), m_PointSet, and PointSetToVector().

◆ GetPositionErrorRMS()

double mitk::PointSetStatisticsCalculator::GetPositionErrorRMS ( )
Returns
Returns the RMS of the errors of all positions of the analysed point set (only valid navigation data). Returns 0 if there is no valid navigation data.

Definition at line 174 of file mitkPointSetStatisticsCalculator.cpp.

References CheckIfAllPositionsAreEqual(), GetMean(), m_PointSet, and PointSetToVector().

◆ GetPositionErrorSampleStandardDeviation()

double mitk::PointSetStatisticsCalculator::GetPositionErrorSampleStandardDeviation ( )
Returns
Returns the sample standard derivation of the errors of all positions of the analysed point set (only valid navigation data). Returns 0 if there is no valid navigation data.

Definition at line 168 of file mitkPointSetStatisticsCalculator.cpp.

References GetErrorList(), GetSampleStabw(), m_PointSet, and PointSetToVector().

◆ GetPositionErrorStandardDeviation()

double mitk::PointSetStatisticsCalculator::GetPositionErrorStandardDeviation ( )
Returns
Returns the standard derivation of the errors of all positions of the analysed point set (only valid navigation data). Returns 0 if there is no valid navigation data.

Definition at line 163 of file mitkPointSetStatisticsCalculator.cpp.

References GetErrorList(), GetStabw(), m_PointSet, and PointSetToVector().

◆ GetPositionMean()

mitk::Point3D mitk::PointSetStatisticsCalculator::GetPositionMean ( )
Returns
Returns the mean position of the analysed point set (only valid navigation data). Returns [0;0;0] if there is no valid navigation data.

Definition at line 276 of file mitkPointSetStatisticsCalculator.cpp.

References GetMean(), m_PointSet, and PointSetToVector().

◆ GetPositionSampleStandardDeviation()

mitk::Vector3D mitk::PointSetStatisticsCalculator::GetPositionSampleStandardDeviation ( )
Returns
Returns the sample standard derivation of each component (x, y and z) of the analysed point set (only valid navigation data). Returns [0;0;0] if there is no valid navigation data.

Definition at line 248 of file mitkPointSetStatisticsCalculator.cpp.

References CheckIfAllPositionsAreEqual(), GetSampleStabw(), m_PointSet, and PointSetToVector().

◆ GetPositionStandardDeviation()

mitk::Vector3D mitk::PointSetStatisticsCalculator::GetPositionStandardDeviation ( )
Returns
Returns the standard derivation of each component (x, y and z) of the analysed point set (only valid navigation data). Returns [0;0;0] if there is no valid navigation data.

Definition at line 220 of file mitkPointSetStatisticsCalculator.cpp.

References CheckIfAllPositionsAreEqual(), GetStabw(), m_PointSet, and PointSetToVector().

◆ GetSampleStabw()

double mitk::PointSetStatisticsCalculator::GetSampleStabw ( std::vector< double >  list)
Returns
returns the sample standard derivation of the given list (NOT of the point set).

Definition at line 72 of file mitkPointSetStatisticsCalculator.cpp.

References GetMean().

Referenced by GetPositionErrorSampleStandardDeviation(), and GetPositionSampleStandardDeviation().

◆ GetStabw()

double mitk::PointSetStatisticsCalculator::GetStabw ( std::vector< double >  list)
Returns
returns the standard derivation of the given list (NOT of the point set).

Definition at line 57 of file mitkPointSetStatisticsCalculator.cpp.

References GetMean().

Referenced by GetPositionErrorStandardDeviation(), and GetPositionStandardDeviation().

◆ mitkClassMacroItkParent()

mitk::PointSetStatisticsCalculator::mitkClassMacroItkParent ( PointSetStatisticsCalculator  ,
itk::Object   
)

◆ mitkNewMacro1Param()

mitk::PointSetStatisticsCalculator::mitkNewMacro1Param ( PointSetStatisticsCalculator  ,
mitk::PointSet::Pointer   
)

◆ New()

static Pointer mitk::PointSetStatisticsCalculator::New ( )
static

Referenced by mitk::NavigationDataEvaluationFilter::GetEulerAnglesMean(), mitk::NavigationDataEvaluationFilter::GetEulerAnglesRMS(), mitk::NavigationDataEvaluationFilter::GetEulerAnglesRMSDegree(), mitk::NavigationDataEvaluationFilter::GetPositionErrorMax(), mitk::NavigationDataEvaluationFilter::GetPositionErrorMean(), mitk::NavigationDataEvaluationFilter::GetPositionErrorMedian(), mitk::NavigationDataEvaluationFilter::GetPositionErrorMin(), mitk::NavigationDataEvaluationFilter::GetPositionErrorRMS(), mitk::NavigationDataEvaluationFilter::GetPositionErrorSampleStandardDeviation(), mitk::NavigationDataEvaluationFilter::GetPositionErrorStandardDeviation(), mitk::NavigationDataEvaluationFilter::GetPositionMean(), mitk::NavigationDataEvaluationFilter::GetPositionSampleStandardDeviation(), mitk::NavigationDataEvaluationFilter::GetPositionStandardDeviation(), and mitk::NavigationDataEvaluationFilter::GetQuaternionStandardDeviation().

◆ PointSetToVector()

std::vector< mitk::Point3D > mitk::PointSetStatisticsCalculator::PointSetToVector ( mitk::PointSet::Pointer  pSet)
protected

Converts a point set to a vector of Point3D.

Definition at line 36 of file mitkPointSetStatisticsCalculator.cpp.

Referenced by GetPositionErrorMax(), GetPositionErrorMean(), GetPositionErrorMedian(), GetPositionErrorMin(), GetPositionErrorRMS(), GetPositionErrorSampleStandardDeviation(), GetPositionErrorStandardDeviation(), GetPositionMean(), GetPositionSampleStandardDeviation(), and GetPositionStandardDeviation().

◆ SetPointSet()

void mitk::PointSetStatisticsCalculator::SetPointSet ( mitk::PointSet::Pointer  pSet)

Sets the point set which will be analysed.

Definition at line 30 of file mitkPointSetStatisticsCalculator.cpp.

References m_PointSet.

Member Data Documentation

◆ m_PointSet

mitk::PointSet::Pointer mitk::PointSetStatisticsCalculator::m_PointSet
protected

Definition at line 104 of file mitkPointSetStatisticsCalculator.h.

Referenced by CheckIfAllPositionsAreEqual(), GetPositionErrorMax(), GetPositionErrorMean(), GetPositionErrorMedian(), GetPositionErrorMin(), GetPositionErrorRMS(), GetPositionErrorSampleStandardDeviation(), GetPositionErrorStandardDeviation(), GetPositionMean(), GetPositionSampleStandardDeviation(), GetPositionStandardDeviation(), PointSetStatisticsCalculator(), and SetPointSet().

The documentation for this class was generated from the following files: