#include <mitkNavigationDataReaderCSV.h>

Inheritance diagram for mitk::NavigationDataReaderCSV:

Collaboration diagram for mitk::NavigationDataReaderCSV:

[legend]

Public Member Functions
	NavigationDataReaderCSV ()

	~NavigationDataReaderCSV () override

std::vector< itk::SmartPointer< BaseData > >	Read () override
	Reads a path or stream and creates a list of BaseData objects. More...

Public Member Functions inherited from mitk::AbstractFileReader
void	SetInput (const std::string &location) override
	Set the input location. More...

void	SetInput (const std::string &location, std::istream *is) override
	Set an input stream to read from. More...

std::string	GetInputLocation () const override
	Get the current input location. More...

std::istream *	GetInputStream () const override
	Get the input stream. More...

MimeType	GetRegisteredMimeType () const

DataStorage::SetOfObjects::Pointer	Read (mitk::DataStorage &ds) override
	Reads the specified file or input stream, loading its contents into the provided DataStorage. More...

ConfidenceLevel	GetConfidenceLevel () const override
	The confidence level of the reader or writer implementation. More...

Options	GetOptions () const override
	returns a list of the supported options More...

us::Any	GetOption (const std::string &name) const override

void	SetOptions (const Options &options) override

void	SetOption (const std::string &name, const us::Any &value) override

void	AddProgressCallback (const ProgressCallback &callback) override

void	RemoveProgressCallback (const ProgressCallback &callback) override

us::ServiceRegistration< IFileReader >	RegisterService (us::ModuleContext *context=us::GetModuleContext())

void	UnregisterService ()

std::vector< std::string >	GetReadFiles () override

Public Member Functions inherited from mitk::IFileReader
	~IFileReader () override

virtual	~IFileReader ()

Public Member Functions inherited from mitk::IFileIO
virtual	~IFileIO ()

Protected Member Functions
mitk::NavigationData::Pointer	CreateNd (std::string timestamp, std::string valid, std::string X, std::string Y, std::string Z, std::string QX, std::string QY, std::string QZ, std::string QR)

std::vector< std::string >	GetFileContentLineByLine (std::string filename)

int	getNumberOfToolsInLine (std::string line)

std::vector< mitk::NavigationData::Pointer >	parseLine (std::string line, int NumOfTools)

double	StringToDouble (const std::string &s)

std::vector< std::string >	splitLine (std::string line)

	NavigationDataReaderCSV (const NavigationDataReaderCSV &other)

mitk::NavigationDataReaderCSV *	Clone () const override

Protected Member Functions inherited from mitk::AbstractFileReader
	AbstractFileReader ()

	~AbstractFileReader () override

	AbstractFileReader (const AbstractFileReader &other)

	AbstractFileReader (const CustomMimeType &mimeType, const std::string &description)

virtual us::ServiceProperties	GetServiceProperties () const

virtual us::ServiceRegistration< CustomMimeType >	RegisterMimeType (us::ModuleContext *context)

void	SetMimeType (const CustomMimeType &mimeType)

const CustomMimeType *	GetMimeType () const

void	SetMimeTypePrefix (const std::string &prefix)

std::string	GetMimeTypePrefix () const

void	SetDescription (const std::string &description)

std::string	GetDescription () const

void	SetDefaultOptions (const Options &defaultOptions)

Options	GetDefaultOptions () const

void	SetRanking (int ranking)
	Set the service ranking for this file reader. More...

int	GetRanking () const

std::string	GetLocalFileName () const
	Get a local file name for reading. More...

virtual void	SetDefaultDataNodeProperties (DataNode *node, const std::string &filePath)

Additional Inherited Members
Public Types inherited from mitk::IFileIO
enum	ConfidenceLevel { Unsupported, PartiallySupported, Supported }
	A confidence level describing the confidence of the reader or writer in handling the given data. More...

typedef std::map< std::string, us::Any >	Options
	Options for reading or writing data. More...

typedef mitk::MessageAbstractDelegate1< float >	ProgressCallback

Static Public Member Functions inherited from mitk::IFileIO
static std::string	PROP_DESCRIPTION ()
	Service property name for a description. More...

static std::string	PROP_MIMETYPE ()
	Service property name for the mime-type associated with this file writer. More...

Protected Attributes inherited from mitk::AbstractFileReader
std::vector< std::string >	m_ReadFiles

Detailed Description

This class reads csv logged navigation datas from the hard disc and returns the navigation data set.

Caution: at the moment only one navigation data is supported which means that only the data of the first navigation tool in the file is read!

Definition at line 28 of file mitkNavigationDataReaderCSV.h.

Constructor & Destructor Documentation

◆ NavigationDataReaderCSV() [1/2]

mitk::NavigationDataReaderCSV::NavigationDataReaderCSV ( )

Definition at line 22 of file mitkNavigationDataReaderCSV.cpp.

References mitk::AbstractFileReader::RegisterService().

Referenced by Clone().

◆ ~NavigationDataReaderCSV()

mitk::NavigationDataReaderCSV::~NavigationDataReaderCSV ( )

override

Definition at line 33 of file mitkNavigationDataReaderCSV.cpp.

◆ NavigationDataReaderCSV() [2/2]

mitk::NavigationDataReaderCSV::NavigationDataReaderCSV ( const NavigationDataReaderCSV & other )

protected

Definition at line 29 of file mitkNavigationDataReaderCSV.cpp.

Member Function Documentation

◆ Clone()

mitk::NavigationDataReaderCSV * mitk::NavigationDataReaderCSV::Clone ( ) const

overrideprotectedvirtual

Implements mitk::AbstractFileReader.

Definition at line 37 of file mitkNavigationDataReaderCSV.cpp.

References NavigationDataReaderCSV().

◆ CreateNd()

mitk::NavigationData::Pointer mitk::NavigationDataReaderCSV::CreateNd	(	std::string	timestamp,
		std::string	valid,
		std::string	X,
		std::string	Y,
		std::string	Z,
		std::string	QX,
		std::string	QY,
		std::string	QZ,
		std::string	QR
	)

protected

/brief Creates a NavigationData Pointer based on the given Input.

Definition at line 86 of file mitkNavigationDataReaderCSV.cpp.

References mitk::NavigationData::New(), and StringToDouble().

Referenced by parseLine().

◆ GetFileContentLineByLine()

std::vector< std::string > mitk::NavigationDataReaderCSV::GetFileContentLineByLine ( std::string filename )

protected

/brief Presents File Content line by line

Definition at line 143 of file mitkNavigationDataReaderCSV.cpp.

References Json::in().

Referenced by Read().

◆ getNumberOfToolsInLine()

int mitk::NavigationDataReaderCSV::getNumberOfToolsInLine ( std::string line )

protected

/brief Calculates the Number of Tools based on the number of colums per line.

Definition at line 61 of file mitkNavigationDataReaderCSV.cpp.

References MITK_ERROR, and splitLine().

Referenced by Read().

◆ parseLine()

std::vector< mitk::NavigationData::Pointer > mitk::NavigationDataReaderCSV::parseLine	(	std::string	line,
		int	NumOfTools
	)

protected

/brief Converts string to double returns zero if failing

Definition at line 125 of file mitkNavigationDataReaderCSV.cpp.

References CreateNd(), offset, and splitLine().

Referenced by Read().

◆ Read()

std::vector< itk::SmartPointer< mitk::BaseData > > mitk::NavigationDataReaderCSV::Read ( )

overridevirtual

Reads a path or stream and creates a list of BaseData objects.

This method must be implemented for each specific reader. Call GetInputStream() first and check for a non-null stream to read from. If the input stream is nullptr, use GetInputLocation() to read from a local file-system path.

If the reader cannot use streams directly, use GetLocalFileName() instead.