CLVoxelFeatures.cpp File Reference

#include "time.h"
#include <sstream>
#include <fstream>
#include <mitkIOUtil.h>
#include <mitkImageAccessByItk.h>
#include <mitkImageCast.h>
#include "mitkCommandLineParser.h"
#include "itkDiscreteGaussianImageFilter.h"
#include <itkLaplacianRecursiveGaussianImageFilter.h>
#include "itkHessianRecursiveGaussianImageFilter.h"
#include "itkUnaryFunctorImageFilter.h"
#include "vnl/algo/vnl_symmetric_eigensystem.h"
#include <itkMultiHistogramFilter.h>
#include <itkSubtractImageFilter.h>
#include <itkLocalStatisticFilter.h>

Go to the source code of this file.

Namespaces
	Functor

Macros
#define	mitkCLVoxeFeatures_cpp

Functions
static std::vector< double >	splitDouble (std::string str, char delimiter)
template<typename TPixel , unsigned int VImageDimension>
void	GaussianFilter (itk::Image< TPixel, VImageDimension > *itkImage, double variance, mitk::Image::Pointer &output)
template<typename TPixel , unsigned int VImageDimension>
void	DifferenceOfGaussFilter (itk::Image< TPixel, VImageDimension > *itkImage, double variance, mitk::Image::Pointer &output)
template<typename TPixel , unsigned int VImageDimension>
void	LaplacianOfGaussianFilter (itk::Image< TPixel, VImageDimension > *itkImage, double variance, mitk::Image::Pointer &output)
template<typename TPixel , unsigned int VImageDimension>
void	HessianOfGaussianFilter (itk::Image< TPixel, VImageDimension > *itkImage, double variance, std::vector< mitk::Image::Pointer > &out)
template<typename TPixel , unsigned int VImageDimension>
void	LocalHistograms2 (itk::Image< TPixel, VImageDimension > *itkImage, std::vector< mitk::Image::Pointer > &out, std::vector< double > params)
template<typename TPixel , unsigned int VImageDimension>
void	LocalHistograms (itk::Image< TPixel, VImageDimension > *itkImage, std::vector< mitk::Image::Pointer > &out, double offset, double delta)
template<typename TPixel , unsigned int VImageDimension>
void	localStatistic (itk::Image< TPixel, VImageDimension > *itkImage, std::vector< mitk::Image::Pointer > &out, int size)
int	main (int argc, char *argv[])

Macro Definition Documentation

mitkCLVoxeFeatures_cpp

#define mitkCLVoxeFeatures_cpp

Definition at line 13 of file CLVoxelFeatures.cpp.

Function Documentation

DifferenceOfGaussFilter()

template<typename TPixel , unsigned int VImageDimension>

void DifferenceOfGaussFilter	(	itk::Image< TPixel, VImageDimension > *	itkImage,
		double	variance,
		mitk::Image::Pointer &	output
	)

Definition at line 99 of file CLVoxelFeatures.cpp.

References mitk::CastToMitkImage().

Referenced by main().

GaussianFilter()

template<typename TPixel , unsigned int VImageDimension>

void GaussianFilter	(	itk::Image< TPixel, VImageDimension > *	itkImage,
		double	variance,
		mitk::Image::Pointer &	output
	)

Definition at line 85 of file CLVoxelFeatures.cpp.

References mitk::CastToMitkImage().

Referenced by main().

HessianOfGaussianFilter()

template<typename TPixel , unsigned int VImageDimension>

void HessianOfGaussianFilter	(	itk::Image< TPixel, VImageDimension > *	itkImage,
		double	variance,
		std::vector< mitk::Image::Pointer > &	out
	)

Definition at line 140 of file CLVoxelFeatures.cpp.

References mitk::CastToMitkImage().

Referenced by main().

LaplacianOfGaussianFilter()

template<typename TPixel , unsigned int VImageDimension>

void LaplacianOfGaussianFilter	(	itk::Image< TPixel, VImageDimension > *	itkImage,
		double	variance,
		mitk::Image::Pointer &	output
	)

Definition at line 122 of file CLVoxelFeatures.cpp.

References mitk::CastToMitkImage().

Referenced by main().

LocalHistograms()

template<typename TPixel , unsigned int VImageDimension>

void LocalHistograms	(	itk::Image< TPixel, VImageDimension > *	itkImage,
		std::vector< mitk::Image::Pointer > &	out,
		double	offset,
		double	delta
	)

Definition at line 192 of file CLVoxelFeatures.cpp.

References mitk::CastToMitkImage(), and mitk::Image::New().

Referenced by main().

LocalHistograms2()

template<typename TPixel , unsigned int VImageDimension>

void LocalHistograms2	(	itk::Image< TPixel, VImageDimension > *	itkImage,
		std::vector< mitk::Image::Pointer > &	out,
		std::vector< double >	params
	)

Definition at line 164 of file CLVoxelFeatures.cpp.

References mitk::CastToMitkImage(), mitk::Image::New(), and offset.

Referenced by main().

localStatistic()

template<typename TPixel , unsigned int VImageDimension>

void localStatistic	(	itk::Image< TPixel, VImageDimension > *	itkImage,
		std::vector< mitk::Image::Pointer > &	out,
		int	size
	)

Definition at line 212 of file CLVoxelFeatures.cpp.

References mitk::CastToMitkImage(), and mitk::Image::New().

Referenced by main().

main()

int main	(	int	argc,
		char *	argv[]
	)

Definition at line 230 of file CLVoxelFeatures.cpp.

References AccessByItk_2, AccessByItk_3, mitkCommandLineParser::addArgument(), us::any_value_to_string(), DifferenceOfGaussFilter(), mitkCommandLineParser::File, GaussianFilter(), HessianOfGaussianFilter(), image, mitkCommandLineParser::Image, mitkCommandLineParser::Input, LaplacianOfGaussianFilter(), LocalHistograms(), LocalHistograms2(), localStatistic(), MITK_INFO, mitk::Image::New(), mitkCommandLineParser::Output, mitkCommandLineParser::parseArguments(), mitk::IOUtil::Save(), mitkCommandLineParser::setArgumentPrefix(), mitkCommandLineParser::setCategory(), mitkCommandLineParser::setContributor(), mitkCommandLineParser::setDescription(), mitkCommandLineParser::setTitle(), splitDouble(), and mitkCommandLineParser::String.

splitDouble()

static std::vector<double> splitDouble ( std::string  str, char  delimiter  )

static

Definition at line 33 of file CLVoxelFeatures.cpp.

Referenced by main().