#include <mitkNavigationDataReaderCSV.h>

Inheritance diagram for mitk::NavigationDataReaderCSV:

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Collaboration diagram for mitk::NavigationDataReaderCSV:

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Public Member Functions
	NavigationDataReaderCSV ()

	~NavigationDataReaderCSV () override

std::vector< itk::SmartPointer< BaseData > >	Read () override

DataStorage::SetOfObjects::Pointer	Read (mitk::DataStorage &ds) override

Public Member Functions inherited from mitk::AbstractFileReader
void	SetInput (const std::string &location) override
	Set the input location. More...

void	SetInput (const std::string &location, std::istream *is) override
	Set an input stream to read from. More...

std::string	GetInputLocation () const override
	Get the current input location. More...

std::istream *	GetInputStream () const override
	Get the input stream. More...

MimeType	GetRegisteredMimeType () const

std::vector< itk::SmartPointer< BaseData > >	Read () override
	Reads a path or stream and creates a list of BaseData objects. More...

DataStorage::SetOfObjects::Pointer	Read (mitk::DataStorage &ds) override
	Reads the specified file or input stream, loading its contents into the provided DataStorage. More...

ConfidenceLevel	GetConfidenceLevel () const override
	The confidence level of the reader or writer implementation. More...

Options	GetOptions () const override
	returns a list of the supported options More...

us::Any	GetOption (const std::string &name) const override

void	SetOptions (const Options &options) override

void	SetOption (const std::string &name, const us::Any &value) override

void	AddProgressCallback (const ProgressCallback &callback) override

void	RemoveProgressCallback (const ProgressCallback &callback) override

us::ServiceRegistration< IFileReader >	RegisterService (us::ModuleContext *context=us::GetModuleContext())

void	UnregisterService ()

std::vector< std::string >	GetReadFiles () override

void	SetProperties (const PropertyList *properties) override
	Optionally provide base data properties as a source of meta data. More...

Public Member Functions inherited from mitk::IFileReader
	~IFileReader () override

virtual	~IFileReader ()

Public Member Functions inherited from mitk::IFileIO
virtual	~IFileIO ()

Protected Member Functions
std::vector< itk::SmartPointer< BaseData > >	DoRead () override

mitk::NavigationData::Pointer	CreateNd (std::string timestamp, std::string valid, std::string X, std::string Y, std::string Z, std::string QX, std::string QY, std::string QZ, std::string QR)

std::vector< std::string >	GetFileContentLineByLine (std::string filename)

int	getNumberOfToolsInLine (std::string line)

std::vector< mitk::NavigationData::Pointer >	parseLine (std::string line, int NumOfTools)

double	StringToDouble (const std::string &s)

std::vector< std::string >	splitLine (std::string line)

	NavigationDataReaderCSV (const NavigationDataReaderCSV &other)

mitk::NavigationDataReaderCSV *	Clone () const override

Protected Member Functions inherited from mitk::AbstractFileReader
	AbstractFileReader ()

	~AbstractFileReader () override

	AbstractFileReader (const AbstractFileReader &other)

	AbstractFileReader (const CustomMimeType &mimeType, const std::string &description)

virtual us::ServiceProperties	GetServiceProperties () const

virtual us::ServiceRegistration< CustomMimeType >	RegisterMimeType (us::ModuleContext *context)

void	SetMimeType (const CustomMimeType &mimeType)

const CustomMimeType *	GetMimeType () const

void	SetMimeTypePrefix (const std::string &prefix)

std::string	GetMimeTypePrefix () const

void	SetDescription (const std::string &description)

std::string	GetDescription () const

void	SetDefaultOptions (const Options &defaultOptions)

Options	GetDefaultOptions () const

void	SetRanking (int ranking)
	Set the service ranking for this file reader. More...

int	GetRanking () const

std::string	GetLocalFileName () const
	Get a local file name for reading. More...

virtual void	SetDefaultDataNodeProperties (DataNode *node, const std::string &filePath)

const PropertyList *	GetProperties () const override

Additional Inherited Members
Public Types inherited from mitk::IFileIO
enum	ConfidenceLevel { Unsupported, PartiallySupported, Supported }
	A confidence level describing the confidence of the reader or writer in handling the given data. More...

typedef std::map< std::string, us::Any >	Options
	Options for reading or writing data. More...

typedef mitk::MessageAbstractDelegate1< float >	ProgressCallback

Static Public Member Functions inherited from mitk::IFileIO
static std::string	PROP_DESCRIPTION ()
	Service property name for a description. More...

static std::string	PROP_MIMETYPE ()
	Service property name for the mime-type associated with this file writer. More...

Protected Attributes inherited from mitk::AbstractFileReader
std::vector< std::string >	m_ReadFiles

Detailed Description

This class reads csv logged navigation datas from the hard disc and returns the navigation data set.

Caution: at the moment only one navigation data is supported which means that only the data of the first navigation tool in the file is read!

Definition at line 28 of file mitkNavigationDataReaderCSV.h.

Constructor & Destructor Documentation

◆ NavigationDataReaderCSV() [1/2]

mitk::NavigationDataReaderCSV::NavigationDataReaderCSV ( )

◆ ~NavigationDataReaderCSV()

mitk::NavigationDataReaderCSV::~NavigationDataReaderCSV ( )

override

◆ NavigationDataReaderCSV() [2/2]

mitk::NavigationDataReaderCSV::NavigationDataReaderCSV ( const NavigationDataReaderCSV & other )

protected

Member Function Documentation

◆ Clone()

mitk::NavigationDataReaderCSV* mitk::NavigationDataReaderCSV::Clone ( ) const

overrideprotectedvirtual

Implements mitk::AbstractFileReader.

◆ CreateNd()

mitk::NavigationData::Pointer mitk::NavigationDataReaderCSV::CreateNd	(	std::string	timestamp,
		std::string	valid,
		std::string	X,
		std::string	Y,
		std::string	Z,
		std::string	QX,
		std::string	QY,
		std::string	QZ,
		std::string	QR
	)

protected

/brief Creates a NavigationData Pointer based on the given Input.

◆ DoRead()

std::vector<itk::SmartPointer<BaseData> > mitk::NavigationDataReaderCSV::DoRead ( )

overrideprotectedvirtual

Method that should be implemented by derived classes and does the real loading. This method is called by Read(). This method must be implemented for each specific reader. Call GetInputStream() first and check for a non-null stream to read from. If the input stream is nullptr, use GetInputLocation() to read from a local file-system path.

If the reader cannot use streams directly, use GetLocalFileName() instead.

Returns: The created BaseData objects.

Exceptions

mitk::Exception

See also: GetLocalFileName(); IFileReader::Read()

Implements mitk::AbstractFileReader.

◆ GetFileContentLineByLine()

std::vector<std::string> mitk::NavigationDataReaderCSV::GetFileContentLineByLine ( std::string filename )

protected

/brief Presents File Content line by line

◆ getNumberOfToolsInLine()

int mitk::NavigationDataReaderCSV::getNumberOfToolsInLine ( std::string line )

protected

/brief Calculates the Number of Tools based on the number of colums per line.

◆ parseLine()

std::vector<mitk::NavigationData::Pointer> mitk::NavigationDataReaderCSV::parseLine	(	std::string	line,
		int	NumOfTools
	)

protected

/brief Converts string to double returns zero if failing

◆ Read() [1/2]

std::vector<itk::SmartPointer<BaseData> > mitk::AbstractFileReader::Read

override

Returns: Returns the NavigationDataSet of the first tool in the given file. Returns an empty NavigationDataSet if the file could not be read.

◆ Read() [2/2]

DataStorage::SetOfObjects::Pointer mitk::AbstractFileReader::Read

override

Returns: Returns the NavigationDataSet of the first tool in the given file. Returns an empty NavigationDataSet if the file could not be read.

◆ splitLine()

std::vector<std::string> mitk::NavigationDataReaderCSV::splitLine ( std::string line )

protected

/brief Split line in elemens based on a given delim

◆ StringToDouble()

double mitk::NavigationDataReaderCSV::StringToDouble ( const std::string & s )

protected

/brief Converts string to double returns zero if failing

The documentation for this class was generated from the following file:

mitkNavigationDataReaderCSV.h

Public Member Functions

Protected Member Functions

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ NavigationDataReaderCSV() [1/2]

◆ ~NavigationDataReaderCSV()

◆ NavigationDataReaderCSV() [2/2]

Member Function Documentation

◆ Clone()

◆ CreateNd()

◆ DoRead()

◆ GetFileContentLineByLine()

◆ getNumberOfToolsInLine()

◆ parseLine()

◆ Read() [1/2]

◆ Read() [2/2]

◆ splitLine()

◆ StringToDouble()