mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer Class Reference

#include <mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h>

Inheritance diagram for mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer:

Collaboration diagram for mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer:

Public Types
typedef DescriptivePharmacokineticBrixModelValueBasedParameterizer	Self
typedef ConcreteModelParameterizerBase< mitk::DescriptivePharmacokineticBrixModel >	Superclass
typedef itk::SmartPointer< Self >	Pointer
typedef itk::SmartPointer< const Self >	ConstPointer
typedef Superclass::ModelBaseType	ModelBaseType
typedef Superclass::ModelBasePointer	ModelBasePointer
typedef Superclass::ModelType	ModelType
typedef Superclass::ModelPointer	ModelPointer
typedef Superclass::StaticParameterValueType	StaticParameterValueType
typedef Superclass::StaticParameterValuesType	StaticParameterValuesType
typedef Superclass::StaticParameterMapType	StaticParameterMapType
typedef itk::Image< double, 3 >	BaseImageType
typedef Superclass::IndexType	IndexType
Public Types inherited from mitk::ConcreteModelParameterizerBase< mitk::DescriptivePharmacokineticBrixModel >
typedef ConcreteModelParameterizerBase< mitk::DescriptivePharmacokineticBrixModel >	Self
typedef ModelParameterizerBase	Superclass
typedef itk::SmartPointer< Self >	Pointer
typedef itk::SmartPointer< const Self >	ConstPointer
typedef Superclass::ModelBaseType	ModelBaseType
typedef Superclass::ModelBasePointer	ModelBasePointer
typedef mitk::DescriptivePharmacokineticBrixModel	ModelType
typedef ModelType::Pointer	ModelPointer
typedef Superclass::StaticParameterValueType	StaticParameterValueType
typedef Superclass::StaticParameterValuesType	StaticParameterValuesType
typedef Superclass::StaticParameterMapType	StaticParameterMapType
typedef Superclass::IndexType	IndexType
Public Types inherited from mitk::ModelParameterizerBase
typedef ModelParameterizerBase	Self
typedef itk::Object	Superclass
typedef itk::SmartPointer< Self >	Pointer
typedef itk::SmartPointer< const Self >	ConstPointer
typedef ModelBase	ModelBaseType
typedef ModelBaseType::Pointer	ModelBasePointer
typedef ModelBaseType::ParametersType	ParametersType
typedef ModelBaseType::StaticParameterValueType	StaticParameterValueType
typedef ModelBaseType::StaticParameterValuesType	StaticParameterValuesType
typedef ModelBaseType::StaticParameterMapType	StaticParameterMapType
typedef ModelBaseType::TimeGridType	TimeGridType
typedef ::itk::Index< 3 >	IndexType
Public Types inherited from mitk::ModelTraitsInterface
typedef itk::Array< double >	ModelResultType
using	ParameterValueType = double
typedef itk::Array< ParameterValueType >	ParametersType
typedef std::string	ParameterNameType
typedef std::vector< ParameterNameType >	ParameterNamesType
typedef ParametersType::SizeValueType	ParametersSizeType
typedef ParameterNamesType	DerivedParameterNamesType
typedef ParametersSizeType	DerivedParametersSizeType
typedef std::map< ParameterNameType, double >	ParamterScaleMapType
typedef std::map< ParameterNameType, std::string >	ParamterUnitMapType
typedef std::map< ParameterNameType, double >	DerivedParamterScaleMapType
typedef std::map< ParameterNameType, std::string >	DerivedParamterUnitMapType
typedef std::string	FunctionStringType
typedef std::string	ModellClassIDType

Public Member Functions
virtual const char *	GetClassName () const
virtual void	SetTau (double _arg)
virtual const double &	GetTau ()
virtual void	SetBaseValue (double _arg)
virtual const double &	GetBaseValue ()
StaticParameterMapType	GetGlobalStaticParameters () const override
StaticParameterMapType	GetLocalStaticParameters (const IndexType &currentPosition) const override
ParametersType	GetDefaultInitialParameterization () const override
Public Member Functions inherited from mitk::ConcreteModelParameterizerBase< mitk::DescriptivePharmacokineticBrixModel >
virtual const char *	GetClassName () const
StaticParameterMapType	GetGlobalStaticParameters () const override
StaticParameterMapType	GetLocalStaticParameters (const IndexType &) const override
ModelBasePointer	GenerateParameterizedModel (const IndexType &currentPosition) const override
ModelBasePointer	GenerateParameterizedModel () const override
ParametersType	GetDefaultInitialParameterization () const override
ParameterNamesType	GetParameterNames () const override
ParametersSizeType	GetNumberOfParameters () const override
ParamterScaleMapType	GetParameterScales () const override
ParamterUnitMapType	GetParameterUnits () const override
ParameterNamesType	GetDerivedParameterNames () const override
ParametersSizeType	GetNumberOfDerivedParameters () const override
DerivedParamterScaleMapType	GetDerivedParameterScales () const override
DerivedParamterUnitMapType	GetDerivedParameterUnits () const override
std::string	GetModelDisplayName () const override
std::string	GetModelType () const override
FunctionStringType	GetFunctionString () const override
ModellClassIDType	GetClassID () const override
std::string	GetXName () const override
std::string	GetXAxisName () const override
std::string	GetXAxisUnit () const override
std::string	GetYAxisName () const override
std::string	GetYAxisUnit () const override
Public Member Functions inherited from mitk::ModelParameterizerBase
ParametersType	GetInitialParameterization () const
ParametersType	GetInitialParameterization (const IndexType &currentPosition) const
void	SetInitialParameterizationDelegate (const InitialParameterizationDelegateBase *delegate)
virtual ModelBasePointer	GenerateParameterizedModel () const =0
virtual void	SetDefaultTimeGrid (TimeGridType _arg)
virtual const TimeGridType &	GetDefaultTimeGrid ()
Public Member Functions inherited from mitk::ModelTraitsInterface
virtual ParameterNamesType	GetParameterNames () const =0
virtual ParametersSizeType	GetNumberOfParameters () const =0
virtual ParamterScaleMapType	GetParameterScales () const =0
virtual ParamterUnitMapType	GetParameterUnits () const =0
virtual DerivedParameterNamesType	GetDerivedParameterNames () const =0
virtual DerivedParametersSizeType	GetNumberOfDerivedParameters () const =0
virtual DerivedParamterScaleMapType	GetDerivedParameterScales () const =0
virtual DerivedParamterUnitMapType	GetDerivedParameterUnits () const =0
virtual std::string	GetModelDisplayName () const =0
virtual std::string	GetModelType () const =0
virtual FunctionStringType	GetFunctionString () const =0
virtual ModellClassIDType	GetClassID () const =0
virtual std::string	GetXName () const =0
virtual std::string	GetXAxisName () const =0
virtual std::string	GetXAxisUnit () const =0
virtual std::string	GetYAxisName () const =0
virtual std::string	GetYAxisUnit () const =0

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from mitk::ConcreteModelParameterizerBase< mitk::DescriptivePharmacokineticBrixModel >
static Pointer	New ()

Protected Member Functions
	DescriptivePharmacokineticBrixModelValueBasedParameterizer ()
	~DescriptivePharmacokineticBrixModelValueBasedParameterizer () override
Protected Member Functions inherited from mitk::ConcreteModelParameterizerBase< mitk::DescriptivePharmacokineticBrixModel >
	ConcreteModelParameterizerBase ()
	~ConcreteModelParameterizerBase () override
Protected Member Functions inherited from mitk::ModelParameterizerBase
	ModelParameterizerBase ()
	~ModelParameterizerBase () override
Protected Member Functions inherited from mitk::ModelTraitsInterface
	ModelTraitsInterface ()
virtual	~ModelTraitsInterface ()

Protected Attributes
double	m_Tau
double	m_BaseValue
Protected Attributes inherited from mitk::ModelParameterizerBase
InitialParameterizationDelegateBase::ConstPointer	m_InitialDelegate
TimeGridType	m_DefaultTimeGrid

Detailed Description

Parameterizer for the DescriptivePharmacokineticBrixModel that don't use an image for initializing the model but a single signal value. This parameterizer is amongst others used for ROI based fiting strategies where no complete image is needed/used.

See also

DescriptivePharmacokineticBrixModelParameterizer

Definition at line 24 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

Member Typedef Documentation

BaseImageType

typedef itk::Image<double, 3> mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::BaseImageType

Definition at line 46 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

ConstPointer

typedef itk::SmartPointer< const Self > mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::ConstPointer

Definition at line 31 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

IndexType

typedef Superclass::IndexType mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::IndexType

Definition at line 48 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

ModelBasePointer

typedef Superclass::ModelBasePointer mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::ModelBasePointer

Definition at line 37 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

ModelBaseType

typedef Superclass::ModelBaseType mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::ModelBaseType

Definition at line 34 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

ModelPointer

typedef Superclass::ModelPointer mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::ModelPointer

Definition at line 40 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

ModelType

typedef Superclass::ModelType mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::ModelType

Definition at line 39 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

Pointer

typedef itk::SmartPointer< Self > mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::Pointer

Definition at line 30 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

Self

typedef DescriptivePharmacokineticBrixModelValueBasedParameterizer mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::Self

Definition at line 28 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

StaticParameterMapType

typedef Superclass::StaticParameterMapType mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::StaticParameterMapType

Definition at line 44 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

StaticParameterValuesType

typedef Superclass::StaticParameterValuesType mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::StaticParameterValuesType

Definition at line 43 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

StaticParameterValueType

typedef Superclass::StaticParameterValueType mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::StaticParameterValueType

Definition at line 42 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

Superclass

typedef ConcreteModelParameterizerBase<mitk::DescriptivePharmacokineticBrixModel> mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::Superclass

Definition at line 29 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

Constructor & Destructor Documentation

DescriptivePharmacokineticBrixModelValueBasedParameterizer()

mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::DescriptivePharmacokineticBrixModelValueBasedParameterizer ( )

protected

~DescriptivePharmacokineticBrixModelValueBasedParameterizer()

mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::~DescriptivePharmacokineticBrixModelValueBasedParameterizer ( )

overrideprotected

Member Function Documentation

GetBaseValue()

virtual const double& mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::GetBaseValue ( )

virtual

GetClassName()

virtual const char* mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::GetClassName ( ) const

virtual

Reimplemented from mitk::ModelParameterizerBase.

GetDefaultInitialParameterization()

ParametersType mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::GetDefaultInitialParameterization ( ) const

overridevirtual

This function returns the default parameterization (e.g. initial parametrization for fitting) defined by the model developer for for the given model.

Implements mitk::ModelParameterizerBase.

GetGlobalStaticParameters()

StaticParameterMapType mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::GetGlobalStaticParameters ( ) const

overridevirtual

Implements mitk::ModelParameterizerBase.

GetLocalStaticParameters()

StaticParameterMapType mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::GetLocalStaticParameters ( const IndexType &  currentPosition ) const

overridevirtual

Implements mitk::ModelParameterizerBase.

GetTau()

virtual const double& mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::GetTau ( )

virtual

New()

static Pointer mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::New ( )

static

SetBaseValue()

virtual void mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::SetBaseValue ( double  _arg )

virtual

SetTau()

virtual void mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::SetTau ( double  _arg )

virtual

Member Data Documentation

m_BaseValue

double mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::m_BaseValue

protected

Contains the base value that should be used by the model.

Definition at line 80 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

m_Tau

double mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::m_Tau

protected

injection time Tau in minutes [min]

Definition at line 77 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

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The documentation for this class was generated from the following file:

• mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h