mitkMetricParameters.h

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/*===================================================================

The Medical Imaging Interaction Toolkit (MITK)

Copyright (c) German Cancer Research Center,
Division of Medical and Biological Informatics.
All rights reserved.

This software is distributed WITHOUT ANY WARRANTY; without
even the implied warranty of MERCHANTABILITY or FITNESS FOR
A PARTICULAR PURPOSE.

See LICENSE.txt or http://www.mitk.org for details.

===================================================================*/

#ifndef MITKMETRICPARAMETERS_H
#define MITKMETRICPARAMETERS_H

#include "MitkRigidRegistrationExports.h"
#include "mitkCommon.h"
#include <itkObjectFactory.h>

namespace mitk
{
  class MITKRIGIDREGISTRATION_EXPORT MetricParameters : public itk::Object
  {
  public:
    mitkClassMacroItkParent(MetricParameters, ::itk::Object);
    itkFactorylessNewMacro(Self) itkCloneMacro(Self)

      
      enum MetricType {
        MEANSQUARESIMAGETOIMAGEMETRIC = 0,
        NORMALIZEDCORRELATIONIMAGETOIMAGEMETRIC = 1,
        GRADIENTDIFFERENCEIMAGETOIMAGEMETRIC = 2,
        KULLBACKLEIBLERCOMPAREHISTOGRAMIMAGETOIMAGEMETRIC = 3,
        CORRELATIONCOEFFICIENTHISTOGRAMIMAGETOIMAGEMETRIC = 4,
        MEANSQUARESHISTOGRAMIMAGETOIMAGEMETRIC = 5,
        MUTUALINFORMATIONHISTOGRAMIMAGETOIMAGEMETRIC = 6,
        NORMALIZEDMUTUALINFORMATIONHISTOGRAMIMAGETOIMAGEMETRIC = 7,
        MATTESMUTUALINFORMATIONIMAGETOIMAGEMETRIC = 8,
        MEANRECIPROCALSQUAREDIFFERENCEIMAGETOIMAGEMETRIC = 9,
        MUTUALINFORMATIONIMAGETOIMAGEMETRIC = 10,
        MATCHCARDINALITYIMAGETOIMAGEMETRIC = 11,
        KAPPASTATISTICIMAGETOIMAGEMETRIC = 12
      };

    itkSetMacro(Metric, int);
    itkGetMacro(Metric, int);

    itkSetMacro(ComputeGradient, bool);
    itkGetMacro(ComputeGradient, bool);

    itkSetMacro(NumberOfHistogramBinsKullbackLeiblerCompareHistogram, unsigned int);

    itkGetMacro(NumberOfHistogramBinsKullbackLeiblerCompareHistogram, unsigned int);

    itkSetMacro(NumberOfHistogramBinsCorrelationCoefficientHistogram, unsigned int);

    itkGetMacro(NumberOfHistogramBinsCorrelationCoefficientHistogram, unsigned int);

    itkSetMacro(NumberOfHistogramBinsMeanSquaresHistogram, unsigned int);

    itkGetMacro(NumberOfHistogramBinsMeanSquaresHistogram, unsigned int);

    itkSetMacro(NumberOfHistogramBinsMutualInformationHistogram, unsigned int);

    itkGetMacro(NumberOfHistogramBinsMutualInformationHistogram, unsigned int);

    itkSetMacro(NumberOfHistogramBinsNormalizedMutualInformationHistogram, unsigned int);

    itkGetMacro(NumberOfHistogramBinsNormalizedMutualInformationHistogram, unsigned int);

    itkSetMacro(SpatialSamplesMattesMutualInformation, unsigned int);

    itkGetMacro(SpatialSamplesMattesMutualInformation, unsigned int);

    itkSetMacro(UseSamplesMattesMutualInformation, bool);

    itkGetMacro(UseSamplesMattesMutualInformation, bool);

    itkSetMacro(NumberOfHistogramBinsMattesMutualInformation, unsigned int);

    itkGetMacro(NumberOfHistogramBinsMattesMutualInformation, unsigned int);

    itkSetMacro(LambdaMeanReciprocalSquareDifference, unsigned int);

    itkGetMacro(LambdaMeanReciprocalSquareDifference, unsigned int);

    itkSetMacro(SpatialSamplesMutualInformation, unsigned int);

    itkGetMacro(SpatialSamplesMutualInformation, unsigned int);

    itkSetMacro(FixedImageStandardDeviationMutualInformation, float);

    itkGetMacro(FixedImageStandardDeviationMutualInformation, float);

    itkSetMacro(MovingImageStandardDeviationMutualInformation, float);

    itkGetMacro(MovingImageStandardDeviationMutualInformation, float);

    itkSetMacro(UseNormalizerAndSmootherMutualInformation, bool);

    itkGetMacro(UseNormalizerAndSmootherMutualInformation, bool);

    itkSetMacro(FixedSmootherVarianceMutualInformation, float);

    itkGetMacro(FixedSmootherVarianceMutualInformation, float);

    itkSetMacro(MovingSmootherVarianceMutualInformation, float);

    itkGetMacro(MovingSmootherVarianceMutualInformation, float);

  protected:
    MetricParameters();
    ~MetricParameters(){};

    int m_Metric;
    bool m_ComputeGradient;
    // for itk::KullbackLeiblerCompareHistogramImageToImageMetric
    unsigned int m_NumberOfHistogramBinsKullbackLeiblerCompareHistogram;
    // for itk::CorrelationCoefficientHistogramImageToImageMetric
    unsigned int m_NumberOfHistogramBinsCorrelationCoefficientHistogram;
    // for itk::MeanSquaresHistogramImageToImageMetric
    unsigned int m_NumberOfHistogramBinsMeanSquaresHistogram;
    // for itk::MutualInformationHistogramImageToImageMetric
    unsigned int m_NumberOfHistogramBinsMutualInformationHistogram;
    // for itk::NormalizedMutualInformationHistogramImageToImageMetric
    unsigned int m_NumberOfHistogramBinsNormalizedMutualInformationHistogram;
    // for itk::MattesMutualInformationImageToImageMetric
    unsigned int m_NumberOfHistogramBinsMattesMutualInformation;
    bool m_UseSamplesMattesMutualInformation;
    unsigned int m_SpatialSamplesMattesMutualInformation;
    // for itk::MeanReciprocalSquareDifferenceImageToImageMetric
    unsigned int m_LambdaMeanReciprocalSquareDifference;
    // for itk::MutualInformationImageToImageMetric
    unsigned int m_SpatialSamplesMutualInformation;
    float m_FixedImageStandardDeviationMutualInformation;
    float m_MovingImageStandardDeviationMutualInformation;
    bool m_UseNormalizerAndSmootherMutualInformation;
    float m_FixedSmootherVarianceMutualInformation;
    float m_MovingSmootherVarianceMutualInformation;
  };

} // namespace mitk

#endif // MITKMETRICPARAMETERS_H