mitkImageAccessByItk.h File Reference

#include <itkCastImageFilter.h>
#include <mitkImageToItk.h>
#include <mitkPPArgCount.h>
#include <mitkPPCat.h>
#include <mitkPPExpand.h>
#include <mitkPPSeqForEach.h>
#include <mitkPPSeqForEachProduct.h>
#include <mitkPPSeqToTuple.h>
#include <mitkPPStringize.h>
#include <mitkPPTupleRem.h>
#include <sstream>

Go to the source code of this file.

Classes
class	mitk::AccessByItkException
	Exception class thrown in AccessByItk macros. More...

Namespaces
	mitk
	DataCollection - Class to facilitate loading/accessing structured data.

Macros
#define	_accessByItkPixelTypeException(pixelType, pixelTypeSeq)
#define	_accessByItkDimensionException(dim, validDims)
#define	_checkSpecificDimensionIter(r, mitkImage, dim)
#define	_checkSpecificDimension(mitkImage, dimSeq)
#define	_msvc_expand_bug(macro, arg)
#define	_accessByItk(itkImageTypeFunctionAndImageSeq, pixeltype, dimension)
#define	_accessByItkArgs(itkImageTypeFunction, type)
#define	_accessByItkProductIter(r, product)
#define	_accessFixedTypeByItk(itkImageTypeFunction, mitkImage, pixelTypeSeq, dimSeq)
#define	_accessByItk_n(itkImageTypeFunctionAndImageSeq, pixeltype, dimension, args)
#define	_accessByItkArgs_n(itkImageTypeFunction, type, args)
#define	_accessByItkProductIter_n(r, product)
#define	_accessFixedTypeByItk_n(itkImageTypeFunction, mitkImage, pixelTypeSeq, dimSeq, va_tuple)
#define	AccessByItk(mitkImage, itkImageTypeFunction)
	Access a MITK image by an ITK image. More...
#define	AccessFixedPixelTypeByItk(mitkImage, itkImageTypeFunction, pixelTypeSeq)
	Access a mitk-image with known pixeltype (but unknown dimension) by an itk-image. More...
#define	AccessIntegralPixelTypeByItk(mitkImage, itkImageTypeFunction)
	Access a mitk-image with an integral pixel type by an itk-image. More...
#define	AccessFloatingPixelTypeByItk(mitkImage, itkImageTypeFunction)
	Access a mitk-image with a floating point pixel type by an ITK image. More...
#define	AccessVectorPixelTypeByItk(mitkImage, itkImageTypeFunction)
#define	AccessFixedDimensionByItk(mitkImage, itkImageTypeFunction, dimension)
	Access a mitk-image with known dimension by an itk-image. More...
#define	AccessVectorFixedDimensionByItk(mitkImage, itkImageTypeFunction, dimension)
#define	AccessFixedTypeByItk(mitkImage, itkImageTypeFunction, pixelTypeSeq, dimSeq)
	Access a mitk-image with known type (pixel type and dimension) by an itk-image. More...
#define	AccessByItk_n(mitkImage, itkImageTypeFunction, va_tuple)
	Access a MITK image by an ITK image with one or more parameters. More...
#define	AccessFixedPixelTypeByItk_n(mitkImage, itkImageTypeFunction, pixelTypeSeq, va_tuple)
	Access a mitk-image with known pixeltype (but unknown dimension) by an itk-image with one or more parameters. More...
#define	AccessIntegralPixelTypeByItk_n(mitkImage, itkImageTypeFunction, va_tuple)
	Access an mitk::Image with an integral pixel type by an ITK image with one or more parameters. More...
#define	AccessFloatingPixelTypeByItk_n(mitkImage, itkImageTypeFunction, va_tuple)
	Access an mitk::Image with a floating point pixel type by an ITK image with one or more parameters. More...
#define	AccessVectorPixelTypeByItk_n(mitkImage, itkImageTypeFunction, va_tuple)
	Access a vector mitk::Image by an ITK vector image with one or more parameters. More...
#define	AccessFixedDimensionByItk_n(mitkImage, itkImageTypeFunction, dimension, va_tuple)
	Access a mitk-image with known dimension by an itk-image with one or more parameters. More...
#define	AccessVectorFixedDimensionByItk_n(mitkImage, itkImageTypeFunction, dimension, va_tuple)
	Access a vector mitk-image with known dimension by a ITK vector image with one or more parameters. More...
#define	AccessFixedTypeByItk_n(mitkImage, itkImageTypeFunction, pixelTypeSeq, dimSeq, va_tuple)
	Access a mitk-image with known type (pixel type and dimension) by an itk-image with one or more parameters. More...
#define	AccessByItk_1(mitkImage, itkImageTypeFunction, arg1)
#define	AccessFixedPixelTypeByItk_1(mitkImage, itkImageTypeFunction, pixelTypeSeq, arg1)
#define	AccessFixedDimensionByItk_1(mitkImage, itkImageTypeFunction, dimension, arg1)
#define	AccessFixedTypeByItk_1(mitkImage, itkImageTypeFunction, pixelTypeSeq, dimSeq, arg1)
#define	AccessByItk_2(mitkImage, itkImageTypeFunction, arg1, arg2)
#define	AccessFixedPixelTypeByItk_2(mitkImage, itkImageTypeFunction, pixelTypeSeq, arg1, arg2)
#define	AccessFixedDimensionByItk_2(mitkImage, itkImageTypeFunction, dimension, arg1, arg2)
#define	AccessFixedTypeByItk_2(mitkImage, itkImageTypeFunction, pixelTypeSeq, dimSeq, arg1, arg2)
#define	AccessByItk_3(mitkImage, itkImageTypeFunction, arg1, arg2, arg3)
#define	AccessFixedPixelTypeByItk_3(mitkImage, itkImageTypeFunction, pixelTypeSeq, arg1, arg2, arg3)
#define	AccessFixedDimensionByItk_3(mitkImage, itkImageTypeFunction, dimension, arg1, arg2, arg3)
#define	AccessFixedTypeByItk_3(mitkImage, itkImageTypeFunction, pixelTypeSeq, dimSeq, arg1, arg2, arg3)
#define	_accessTwoImagesByItk(itkImageTypeFunction, pixeltype1, dim1, pixeltype2, dim2)
#define	_accessTwoImagesByItkArgs2(itkImageTypeFunction, type1, type2)
#define	_accessTwoImagesByItkArgs(product)
#define	_accessTwoImagesByItkIter(r, product)
#define	_accessTwoImagesByItkForEach(itkImageTypeFunction, tseq1, tseq2)
#define	AccessTwoImagesFixedDimensionByItk(mitkImage1, mitkImage2, itkImageTypeFunction, dimension)
	Access two mitk-images with known dimension by itk-images. More...

Macro Definition Documentation

#define _accessByItk	(		itkImageTypeFunctionAndImageSeq,
			pixeltype,
			dimension
	)

Definition at line 82 of file mitkImageAccessByItk.h.

#define _accessByItk_n	(		itkImageTypeFunctionAndImageSeq,
			pixeltype,
			dimension,
			args
	)

Definition at line 110 of file mitkImageAccessByItk.h.

#define _accessByItkArgs	(		itkImageTypeFunction,
			type
	)

Definition at line 91 of file mitkImageAccessByItk.h.

#define _accessByItkArgs_n	(		itkImageTypeFunction,
			type,
			args
	)

Definition at line 120 of file mitkImageAccessByItk.h.

#define _accessByItkDimensionException	(		dim,
			validDims
	)

Definition at line 62 of file mitkImageAccessByItk.h.

#define _accessByItkPixelTypeException	(		pixelType,
			pixelTypeSeq
	)

Definition at line 54 of file mitkImageAccessByItk.h.

#define _accessByItkProductIter	(		r,
			product
	)

Definition at line 100 of file mitkImageAccessByItk.h.

#define _accessByItkProductIter_n	(		r,
			product
	)

Definition at line 132 of file mitkImageAccessByItk.h.

#define _accessFixedTypeByItk	(		itkImageTypeFunction,
			mitkImage,
			pixelTypeSeq,
			dimSeq
	)

Definition at line 105 of file mitkImageAccessByItk.h.

#define _accessFixedTypeByItk_n	(		itkImageTypeFunction,
			mitkImage,
			pixelTypeSeq,
			dimSeq,
			va_tuple
	)

Definition at line 138 of file mitkImageAccessByItk.h.

#define _accessTwoImagesByItk	(		itkImageTypeFunction,
			pixeltype1,
			dim1,
			pixeltype2,
			dim2
	)

Definition at line 601 of file mitkImageAccessByItk.h.

#define _accessTwoImagesByItkArgs

(

product

)

Definition at line 623 of file mitkImageAccessByItk.h.

#define _accessTwoImagesByItkArgs2	(		itkImageTypeFunction,
			type1,
			type2
	)

Definition at line 620 of file mitkImageAccessByItk.h.

#define _accessTwoImagesByItkForEach	(		itkImageTypeFunction,
			tseq1,
			tseq2
	)

Definition at line 638 of file mitkImageAccessByItk.h.

#define _accessTwoImagesByItkIter	(		r,
			product
	)

Definition at line 635 of file mitkImageAccessByItk.h.

#define _checkSpecificDimension	(		mitkImage,
			dimSeq
	)

Definition at line 74 of file mitkImageAccessByItk.h.

#define _checkSpecificDimensionIter	(		r,
			mitkImage,
			dim
	)

Definition at line 69 of file mitkImageAccessByItk.h.

#define _msvc_expand_bug	(		macro,
			arg
	)

Definition at line 78 of file mitkImageAccessByItk.h.

#define AccessByItk_1	(		mitkImage,
			itkImageTypeFunction,
			arg1
	)

Examples:

Step6.cpp.

Definition at line 571 of file mitkImageAccessByItk.h.

Referenced by mitk::GIFVolumetricStatistics::CalculateFeatures(), mitk::BoundingShapeCropper::ComputeData(), mitk::LabelSetImage::Concatenate(), mitk::CLUtil::CountVoxel(), mitk::WatershedTool::DoIt(), mitk::MorphologicalOperations::FillHoles(), mitk::FeatureBasedEdgeDetectionFilter::GenerateData(), mitk::ImageToPointCloudFilter::GenerateData(), mitk::CompareImageDataFilter::GenerateData(), mitk::ImageStatisticsCalculator::GetStatistics(), mitk::CLUtil::MergeLabels(), mitk::PyramidalRegistrationMethodAccessFunctor::operator()(), mitk::ImageRegistrationMethodAccessFunctor::operator()(), mitk::RTDoseReader::Read(), mitk::LabelSetImage::SetActiveLayer(), Step6::StartRegionGrowing(), mitk::OtsuTool3D::UpdateBinaryPreview(), and mitk::ImageWriter::WriteByITK().

#define AccessByItk_2	(		mitkImage,
			itkImageTypeFunction,
			arg1,
			arg2
	)

Definition at line 579 of file mitkImageAccessByItk.h.

Referenced by Assert_ItkImportWithinAccessByItkSucceded_ReturnsTrue(), mitk::LabeledImageVolumeCalculator::Calculate(), mitk::GIFVolumetricStatistics::CalculateFeatures(), mitk::ImageStatisticsHolder::ComputeImageStatistics(), mitk::ConvertLabelSetImageToImage(), mitk::CLUtil::CountVoxel(), mitk::LabelSetImage::CreateLabelMask(), mitk::LabelSetImage::EraseLabel(), mitk::GeometryClipImageFilter::GenerateData(), mitk::CLUtil::InsertLabel(), main(), mitk::LabelSetImage::MaskStamp(), mitk::LabelSetImage::MergeLabel(), mitk::LabelSetImage::MergeLabels(), mitk::PickingTool::OnPointAdded(), QmitkAdaptiveRegionGrowingToolGUI::RunSegmentation(), and mitk::LabelSetImage::UpdateCenterOfMass().

#define AccessByItk_3	(		mitkImage,
			itkImageTypeFunction,
			arg1,
			arg2,
			arg3
	)

Definition at line 588 of file mitkImageAccessByItk.h.

Referenced by mitk::GIFGrayLevelRunLength::CalculateFeatures(), mitk::GIFCooccurenceMatrix::CalculateFeatures(), mitk::GIFFirstOrderStatistics::CalculateFeatures(), mitk::PixelManipulationTool::CalculateImage(), mitk::MorphologicalOperations::Closing(), mitk::MorphologicalOperations::Dilate(), mitk::MorphologicalOperations::Erode(), mitk::FeatureBasedEdgeDetectionFilter::GenerateData(), mitk::HeightFieldSurfaceClipImageFilter::GenerateData(), main(), and mitk::MorphologicalOperations::Opening().

#define AccessFixedDimensionByItk_1	(		mitkImage,
			itkImageTypeFunction,
			dimension,
			arg1
	)

Definition at line 574 of file mitkImageAccessByItk.h.

Referenced by mitk::CLUtil::CreateCheckerboardMask(), mitk::ImageLiveWireContourModelFilter::CreateDynamicCostMap(), mitk::PartialVolumeAnalysisHistogramCalculator::ExtractImageAndMask(), mitk::ImageStatisticsCalculator::ExtractImageAndMask(), mitk::CLUtil::FillHoleGrayscale(), mitk::Convert2Dto3DImageFilter::GenerateData(), mitk::DWIHeadMotionCorrectionFilter::GenerateData(), mitk::AutoCropImageFilter::GenerateData(), mitk::LabelSetImageToSurfaceFilter::GenerateData(), mitk::LabeledImageToSurfaceFilter::GetAvailableLabels(), mitk::PlanarFigureSegmentationController::GetInterpolationResult(), mitk::PyramidImageRegistrationMethod::GetResampledMovingImage(), mitk::ShapeBasedInterpolationAlgorithm::Interpolate(), mitk::SliceBasedInterpolationController::SetChangedSlice(), mitk::SegmentationInterpolationController::SetChangedSlice(), mitk::SegmentationInterpolationController::SetChangedVolume(), mitk::SliceBasedInterpolationController::SetWorkingImage(), and mitk::SurfaceStampImageFilter::SurfaceStamp().

#define AccessFixedDimensionByItk_2	(		mitkImage,
			itkImageTypeFunction,
			dimension,
			arg1,
			arg2
	)

Definition at line 583 of file mitkImageAccessByItk.h.

Referenced by QmitkSliceBasedInterpolatorWidget::AcceptAllInterpolations(), mitk::BoundingObjectCutter::ComputeData(), mitk::PartialVolumeAnalysisHistogramCalculator::ComputeStatistics(), mitk::ImageStatisticsCalculator::ComputeStatistics(), mitk::BinaryThresholdTool::CreateNewSegmentationFromThreshold(), mitk::BinaryThresholdULTool::CreateNewSegmentationFromThreshold(), mitk::CLUtil::GaussianFilter(), mitk::HotspotMaskGenerator::GetMask(), mitk::CLUtil::GrabLabel(), mitk::CLUtil::InterpolateCheckerboardPrediction(), mitk::CLUtil::LogicalAndImages(), main(), QmitkSliceBasedInterpolatorWidget::OnAcceptInterpolationClicked(), mitk::LiveWireTool2D::OnInitLiveWire(), mitk::RegionGrowingTool::OnMousePressed(), mitk::CalculateGrayValueStatisticsTool::ProcessOneWorkingData(), and mitk::SegmentationInterpolationController::SetSegmentationVolume().

#define AccessFixedDimensionByItk_3	(		mitkImage,
			itkImageTypeFunction,
			dimension,
			arg1,
			arg2,
			arg3
	)

Definition at line 592 of file mitkImageAccessByItk.h.

Referenced by mitk::CLUtil::ClosingBinary(), mitk::PartialVolumeAnalysisHistogramCalculator::ComputeStatistics(), mitk::ImageStatisticsCalculator::ComputeStatistics(), mitk::CLUtil::ConnectedComponentsImage(), mitk::CLUtil::DilateBinary(), mitk::CLUtil::DilateGrayscale(), mitk::CLUtil::ErodeBinary(), mitk::CLUtil::ErodeGrayscale(), mitk::PartialVolumeAnalysisHistogramCalculator::ExtractImageAndMask(), mitk::ShapeBasedInterpolationAlgorithm::Interpolate(), mitk::RegionGrowingTool::OnMouseMoved(), mitk::RegionGrowingTool::OnMousePressedOutside(), mitk::PartialVolumeAnalysisClusteringCalculator::PerformClustering(), mitk::PartialVolumeAnalysisClusteringCalculator::PerformQuantification(), mitk::PartialVolumeAnalysisClusteringCalculator::PerformQuantiles(), mitk::CLUtil::ProbabilityMap(), and mitk::SegTool2D::WritePreviewOnWorkingImage().

#define AccessFixedPixelTypeByItk_1	(		mitkImage,
			itkImageTypeFunction,
			pixelTypeSeq,
			arg1
	)

Definition at line 572 of file mitkImageAccessByItk.h.

Referenced by mitk::ImageWriter::WriteByITK().

#define AccessFixedPixelTypeByItk_2	(		mitkImage,
			itkImageTypeFunction,
			pixelTypeSeq,
			arg1,
			arg2
	)

Definition at line 581 of file mitkImageAccessByItk.h.

Referenced by mitk::RGBToRGBACastImageFilter::GenerateData().

#define AccessFixedPixelTypeByItk_3	(		mitkImage,
			itkImageTypeFunction,
			pixelTypeSeq,
			arg1,
			arg2,
			arg3
	)

Definition at line 590 of file mitkImageAccessByItk.h.

#define AccessFixedTypeByItk_1	(		mitkImage,
			itkImageTypeFunction,
			pixelTypeSeq,
			dimSeq,
			arg1
	)

Definition at line 576 of file mitkImageAccessByItk.h.

Referenced by mitk::CastToItkImage(), and mitk::CastToItkImage< itkImageRGBUS3 >().

#define AccessFixedTypeByItk_2	(		mitkImage,
			itkImageTypeFunction,
			pixelTypeSeq,
			dimSeq,
			arg1,
			arg2
	)

Definition at line 585 of file mitkImageAccessByItk.h.

#define AccessFixedTypeByItk_3	(		mitkImage,
			itkImageTypeFunction,
			pixelTypeSeq,
			dimSeq,
			arg1,
			arg2,
			arg3
	)

Definition at line 594 of file mitkImageAccessByItk.h.

#define AccessFloatingPixelTypeByItk	(		mitkImage,
			itkImageTypeFunction
	)

Access a mitk-image with a floating point pixel type by an ITK image.

See AccessByItk for details.

Parameters

mitkImage	The MITK input image.
itkImageTypeFunction	The templated access-function to be called.

Exceptions

mitk::AccessByItkException

If mitkImage is of unsupported pixel type or dimension.

See also

AccessFixedPixelTypeByItk

AccessByItk

AccessFloatingPixelTypeByItk_n

Definition at line 254 of file mitkImageAccessByItk.h.

#define AccessFloatingPixelTypeByItk_n	(		mitkImage,
			itkImageTypeFunction,
			va_tuple
	)

Access an mitk::Image with a floating point pixel type by an ITK image with one or more parameters.

See AccessByItk_n for details.

Parameters

va_tuple	A variable length tuple containing the arguments to be passed to the access function itkImageTypeFunction, e.g. ("first", 2, THIRD).
mitkImage	The MITK input image.
itkImageTypeFunction	The templated access-function to be called.

Exceptions

mitk::AccessByItkException

If mitkImage is of unsupported pixel type or dimension.

See also

AccessFixedPixelTypeByItk_n

AccessByItk_n

AccessFloatingPixelTypeByItk

Definition at line 450 of file mitkImageAccessByItk.h.

#define AccessIntegralPixelTypeByItk	(		mitkImage,
			itkImageTypeFunction
	)

Access a mitk-image with an integral pixel type by an itk-image.

See AccessByItk for details.

Parameters

mitkImage	The MITK input image.
itkImageTypeFunction	The templated access-function to be called.

Exceptions

mitk::AccessByItkException

If mitkImage is of unsupported pixel type or dimension.

See also

AccessFixedPixelTypeByItk

AccessByItk

AccessIntegralPixelTypeByItk_n

Definition at line 236 of file mitkImageAccessByItk.h.

#define AccessIntegralPixelTypeByItk_n	(		mitkImage,
			itkImageTypeFunction,
			va_tuple
	)

Access an mitk::Image with an integral pixel type by an ITK image with one or more parameters.

See AccessByItk_n for details.

Parameters

va_tuple	A variable length tuple containing the arguments to be passed to the access function itkImageTypeFunction, e.g. ("first", 2, THIRD).
mitkImage	The MITK input image.
itkImageTypeFunction	The templated access-function to be called.

Exceptions

mitk::AccessByItkException

If mitkImage is of unsupported pixel type or dimension.

See also

AccessFixedPixelTypeByItk_n

AccessByItk_n

AccessIntegralPixelTypeByItk

Definition at line 426 of file mitkImageAccessByItk.h.

#define AccessVectorFixedDimensionByItk	(		mitkImage,
			itkImageTypeFunction,
			dimension
	)

Definition at line 286 of file mitkImageAccessByItk.h.

#define AccessVectorPixelTypeByItk	(		mitkImage,
			itkImageTypeFunction
	)

Definition at line 258 of file mitkImageAccessByItk.h.

#define AccessVectorPixelTypeByItk_n	(		mitkImage,
			itkImageTypeFunction,
			va_tuple
	)

Access a vector mitk::Image by an ITK vector image with one or more parameters.

See AccessByItk_n for details.

Parameters

va_tuple	A variable length tuple containing the arguments to be passed to the access function itkImageTypeFunction, e.g. ("first", 2, THIRD).
mitkImage	The MITK input image.
itkImageTypeFunction	The templated access-function to be called.

Exceptions

mitk::AccessByItkException

If mitkImage is of unsupported pixel type or dimension.

See also

AccessFixedPixelTypeByItk_n

AccessByItk_n

Definition at line 472 of file mitkImageAccessByItk.h.

Referenced by mitk::ImageStatisticsHolder::ComputeImageStatistics(), and mitk::ConvertImageToLabelSetImage().