Medical Imaging Interaction Toolkit  2016.11.0
Medical Imaging Interaction Toolkit
mitk::RTDoseReader Class Reference

RTDoseReader reads DICOM files of modality RTDOSE. More...

#include <mitkRTDoseReader.h>

Inheritance diagram for mitk::RTDoseReader:
Collaboration diagram for mitk::RTDoseReader:

Public Member Functions

 RTDoseReader (const RTDoseReader &other)
 
 RTDoseReader ()
 
virtual ~RTDoseReader ()
 Reads a dicom dataset from a RTDOSE file. More...
 
virtual std::vector< itk::SmartPointer< BaseData > > Read () override
 Reads a path or stream and creates a list of BaseData objects. More...
 
- Public Member Functions inherited from mitk::AbstractFileReader
virtual void SetInput (const std::string &location) override
 Set the input location. More...
 
virtual void SetInput (const std::string &location, std::istream *is) override
 Set an input stream to read from. More...
 
virtual std::string GetInputLocation () const override
 Get the current input location. More...
 
virtual std::istream * GetInputStream () const override
 Get the input stream. More...
 
MimeType GetRegisteredMimeType () const
 
virtual DataStorage::SetOfObjects::Pointer Read (mitk::DataStorage &ds) override
 Reads the specified file or input stream, loading its contents into the provided DataStorage. More...
 
virtual ConfidenceLevel GetConfidenceLevel () const override
 The confidence level of the reader or writer implementation. More...
 
virtual Options GetOptions () const override
 returns a list of the supported options More...
 
virtual us::Any GetOption (const std::string &name) const override
 
virtual void SetOptions (const Options &options) override
 
virtual void SetOption (const std::string &name, const us::Any &value) override
 
virtual void AddProgressCallback (const ProgressCallback &callback) override
 
virtual void RemoveProgressCallback (const ProgressCallback &callback) override
 
us::ServiceRegistration< IFileReaderRegisterService (us::ModuleContext *context=us::GetModuleContext())
 
void UnregisterService ()
 
- Public Member Functions inherited from mitk::IFileReader
virtual ~IFileReader ()
 
- Public Member Functions inherited from mitk::IFileIO
virtual ~IFileIO ()
 

Additional Inherited Members

- Public Types inherited from mitk::IFileIO
enum  ConfidenceLevel { Unsupported, PartiallySupported, Supported }
 A confidence level describing the confidence of the reader or writer in handling the given data. More...
 
typedef std::map< std::string, us::AnyOptions
 Options for reading or writing data. More...
 
typedef mitk::MessageAbstractDelegate1< float > ProgressCallback
 
- Static Public Member Functions inherited from mitk::IFileIO
static std::string PROP_DESCRIPTION ()
 Service property name for a description. More...
 
static std::string PROP_MIMETYPE ()
 Service property name for the mime-type associated with this file writer. More...
 
- Protected Member Functions inherited from mitk::AbstractFileReader
 AbstractFileReader ()
 
 ~AbstractFileReader ()
 
 AbstractFileReader (const AbstractFileReader &other)
 
 AbstractFileReader (const CustomMimeType &mimeType, const std::string &description)
 
virtual us::ServiceProperties GetServiceProperties () const
 
virtual us::ServiceRegistration< CustomMimeTypeRegisterMimeType (us::ModuleContext *context)
 
void SetMimeType (const CustomMimeType &mimeType)
 
const CustomMimeTypeGetMimeType () const
 
void SetMimeTypePrefix (const std::string &prefix)
 
std::string GetMimeTypePrefix () const
 
void SetDescription (const std::string &description)
 
std::string GetDescription () const
 
void SetDefaultOptions (const Options &defaultOptions)
 
Options GetDefaultOptions () const
 
void SetRanking (int ranking)
 Set the service ranking for this file reader. More...
 
int GetRanking () const
 
std::string GetLocalFileName () const
 Get a local file name for reading. More...
 
virtual void SetDefaultDataNodeProperties (DataNode *node, const std::string &filePath)
 

Detailed Description

RTDoseReader reads DICOM files of modality RTDOSE.

Definition at line 32 of file mitkRTDoseReader.h.

Constructor & Destructor Documentation

mitk::RTDoseReader::RTDoseReader ( const RTDoseReader other)

Definition at line 44 of file mitkRTDoseReader.cpp.

mitk::RTDoseReader::RTDoseReader ( )

Definition at line 40 of file mitkRTDoseReader.cpp.

References mitk::AbstractFileReader::RegisterService().

mitk::RTDoseReader::~RTDoseReader ( )
virtual

Reads a dicom dataset from a RTDOSE file.

Parameters
filenameThe path with the dose file
Returns
Returns a mitkDataNode::Pointer in which a mitk::Image is stored

The method reads the PixelData from the DicomRT dose file and scales them with a factor for getting Gray-values instead of pixel-values. The Gray-values are stored in a mitkImage with a vtkColorTransferFunc. Relative values are used for coloring the image. The relative values are relative to a PrescriptionDose defined in the RT-Plan. If there is no RT-Plan file PrescriptionDose is set to 80% of the maximum dose.

Definition at line 49 of file mitkRTDoseReader.cpp.

Member Function Documentation

std::vector< itk::SmartPointer< BaseData > > mitk::RTDoseReader::Read ( )
overridevirtual

Reads a path or stream and creates a list of BaseData objects.

This method must be implemented for each specific reader. Call GetInputStream() first and check for a non-null stream to read from. If the input stream is NULL, use GetInputLocation() to read from a local file-system path.

If the reader cannot use streams directly, use GetLocalFileName() instead.

Returns
The created BaseData objects.
Exceptions
mitk::Exception
See also
GetLocalFileName()
IFileReader::Read()

Implements mitk::AbstractFileReader.

Definition at line 89 of file mitkRTDoseReader.cpp.

References AccessByItk_1, mitk::IDICOMTagsOfInterest::AddTagOfInterest(), mitk::AbstractFileReader::GetInputLocation(), mitk::DICOMImageBlockDescriptor::GetMitkImage(), mitk::IDICOMTagsOfInterest::GetTagsOfInterest(), MITK_ERROR, mitk::New(), and mitk::RTConstants::PRESCRIBED_DOSE_PROPERTY_NAME.


The documentation for this class was generated from the following files: