Medical Imaging Interaction Toolkit
2016.11.0
Medical Imaging Interaction Toolkit
|
#include <mitkConnectomicsNetworkWriter.h>
Public Types | |
typedef mitk::ConnectomicsNetwork | InputType |
typedef std::vector< std::pair< std::pair< mitk::ConnectomicsNetwork::NetworkNode, mitk::ConnectomicsNetwork::NetworkNode >, mitk::ConnectomicsNetwork::NetworkEdge > > | EdgeVectorType |
typedef std::vector< mitk::ConnectomicsNetwork::NetworkNode > | VertexVectorType |
Public Types inherited from mitk::IFileIO | |
enum | ConfidenceLevel { Unsupported, PartiallySupported, Supported } |
A confidence level describing the confidence of the reader or writer in handling the given data. More... | |
typedef std::map< std::string, us::Any > | Options |
Options for reading or writing data. More... | |
typedef mitk::MessageAbstractDelegate1< float > | ProgressCallback |
Public Member Functions | |
ConnectomicsNetworkWriter () | |
virtual | ~ConnectomicsNetworkWriter () |
virtual void | Write () override |
Write the base data to the specified location or output stream. More... | |
Public Member Functions inherited from mitk::AbstractFileWriter | |
virtual void | SetInput (const BaseData *data) override |
Set the input data for writing. More... | |
virtual const BaseData * | GetInput () const override |
Get the input data set via SetInput(). More... | |
virtual void | SetOutputLocation (const std::string &location) override |
Set the output location. More... | |
virtual std::string | GetOutputLocation () const override |
Get the current output location. More... | |
virtual void | SetOutputStream (const std::string &location, std::ostream *os) override |
Set an output stream for writing. More... | |
virtual std::ostream * | GetOutputStream () const override |
Get the output stream. More... | |
virtual ConfidenceLevel | GetConfidenceLevel () const override |
The confidence level of the reader or writer implementation. More... | |
MimeType | GetRegisteredMimeType () const |
virtual Options | GetOptions () const override |
returns a list of the supported options More... | |
virtual us::Any | GetOption (const std::string &name) const override |
virtual void | SetOptions (const Options &options) override |
virtual void | SetOption (const std::string &name, const us::Any &value) override |
virtual void | AddProgressCallback (const ProgressCallback &callback) override |
virtual void | RemoveProgressCallback (const ProgressCallback &callback) override |
us::ServiceRegistration< IFileWriter > | RegisterService (us::ModuleContext *context=us::GetModuleContext()) |
void | UnregisterService () |
Public Member Functions inherited from mitk::IFileWriter | |
virtual | ~IFileWriter () |
Public Member Functions inherited from mitk::IFileIO | |
virtual | ~IFileIO () |
Protected Member Functions | |
ConnectomicsNetworkWriter (const ConnectomicsNetworkWriter &other) | |
virtual mitk::ConnectomicsNetworkWriter * | Clone () const override |
Protected Member Functions inherited from mitk::AbstractFileWriter | |
~AbstractFileWriter () | |
AbstractFileWriter (const AbstractFileWriter &other) | |
AbstractFileWriter (const std::string &baseDataType) | |
AbstractFileWriter (const std::string &baseDataType, const CustomMimeType &mimeType, const std::string &description) | |
virtual us::ServiceProperties | GetServiceProperties () const |
virtual us::ServiceRegistration< CustomMimeType > | RegisterMimeType (us::ModuleContext *context) |
void | SetMimeType (const CustomMimeType &mimeType) |
const CustomMimeType * | GetMimeType () const |
void | SetMimeTypePrefix (const std::string &prefix) |
std::string | GetMimeTypePrefix () const |
void | SetDescription (const std::string &description) |
Sets a human readable description of this writer. More... | |
std::string | GetDescription () const |
void | SetDefaultOptions (const Options &defaultOptions) |
Options | GetDefaultOptions () const |
void | SetRanking (int ranking) |
Set the service ranking for this file writer. More... | |
int | GetRanking () const |
void | SetBaseDataType (const std::string &baseDataType) |
Sets the name of the mitk::Basedata that this writer is able to handle. More... | |
virtual std::string | GetBaseDataType () const |
void | ValidateOutputLocation () const |
Additional Inherited Members | |
Static Public Member Functions inherited from mitk::IFileWriter | |
static std::string | PROP_BASEDATA_TYPE () |
Service property name for the supported mitk::BaseData sub-class. More... | |
Static Public Member Functions inherited from mitk::IFileIO | |
static std::string | PROP_DESCRIPTION () |
Service property name for a description. More... | |
static std::string | PROP_MIMETYPE () |
Service property name for the mime-type associated with this file writer. More... | |
Writes connectomics networks to a file
Definition at line 32 of file mitkConnectomicsNetworkWriter.h.
typedef std::vector< std::pair< std::pair< mitk::ConnectomicsNetwork::NetworkNode, mitk::ConnectomicsNetwork::NetworkNode > , mitk::ConnectomicsNetwork::NetworkEdge > > mitk::ConnectomicsNetworkWriter::EdgeVectorType |
Definition at line 38 of file mitkConnectomicsNetworkWriter.h.
Definition at line 35 of file mitkConnectomicsNetworkWriter.h.
typedef std::vector< mitk::ConnectomicsNetwork::NetworkNode > mitk::ConnectomicsNetworkWriter::VertexVectorType |
Definition at line 39 of file mitkConnectomicsNetworkWriter.h.
mitk::ConnectomicsNetworkWriter::ConnectomicsNetworkWriter | ( | ) |
Definition at line 23 of file mitkConnectomicsNetworkWriter.cpp.
References mitk::AbstractFileWriter::RegisterService().
|
virtual |
Definition at line 35 of file mitkConnectomicsNetworkWriter.cpp.
|
protected |
Definition at line 29 of file mitkConnectomicsNetworkWriter.cpp.
|
overrideprotectedvirtual |
Implements mitk::AbstractFileWriter.
Definition at line 38 of file mitkConnectomicsNetworkWriter.cpp.
|
overridevirtual |
Write the base data to the specified location or output stream.
This method must be implemented for each specific writer. Call GetOutputStream() first and check for a non-null stream to write to. If the output stream is NULL
, use GetOutputLocation() to write to a local file-system path.
If the reader cannot use streams directly, use GetLocalFile() to retrieve a temporary local file name instead.
mitk::Exception |
Implements mitk::AbstractFileWriter.
Definition at line 43 of file mitkConnectomicsNetworkWriter.cpp.
References mitk::BaseGeometry::GetMatrixColumn(), mitk::BaseGeometry::GetOrigin(), mitk::BaseGeometry::GetSpacing(), MITK_ERROR, MITK_INFO, mitk::ConnectomicsNetworkDefinitions::VERSION_STRING, mitk::ConnectomicsNetworkDefinitions::XML_CONNECTOMICS_FILE, mitk::ConnectomicsNetworkDefinitions::XML_EDGE, mitk::ConnectomicsNetworkDefinitions::XML_EDGE_DOUBLE_WEIGHT_ID, mitk::ConnectomicsNetworkDefinitions::XML_EDGE_ID, mitk::ConnectomicsNetworkDefinitions::XML_EDGE_SOURCE_ID, mitk::ConnectomicsNetworkDefinitions::XML_EDGE_TARGET_ID, mitk::ConnectomicsNetworkDefinitions::XML_EDGE_WEIGHT_ID, mitk::ConnectomicsNetworkDefinitions::XML_EDGES, mitk::ConnectomicsNetworkDefinitions::XML_FILE_VERSION, mitk::ConnectomicsNetworkDefinitions::XML_GEOMETRY, mitk::ConnectomicsNetworkDefinitions::XML_MATRIX_XX, mitk::ConnectomicsNetworkDefinitions::XML_MATRIX_XY, mitk::ConnectomicsNetworkDefinitions::XML_MATRIX_XZ, mitk::ConnectomicsNetworkDefinitions::XML_MATRIX_YX, mitk::ConnectomicsNetworkDefinitions::XML_MATRIX_YY, mitk::ConnectomicsNetworkDefinitions::XML_MATRIX_YZ, mitk::ConnectomicsNetworkDefinitions::XML_MATRIX_ZX, mitk::ConnectomicsNetworkDefinitions::XML_MATRIX_ZY, mitk::ConnectomicsNetworkDefinitions::XML_MATRIX_ZZ, mitk::ConnectomicsNetworkDefinitions::XML_ORIGIN_X, mitk::ConnectomicsNetworkDefinitions::XML_ORIGIN_Y, mitk::ConnectomicsNetworkDefinitions::XML_ORIGIN_Z, mitk::ConnectomicsNetworkDefinitions::XML_SPACING_X, mitk::ConnectomicsNetworkDefinitions::XML_SPACING_Y, mitk::ConnectomicsNetworkDefinitions::XML_SPACING_Z, mitk::ConnectomicsNetworkDefinitions::XML_VERTEX, mitk::ConnectomicsNetworkDefinitions::XML_VERTEX_ID, mitk::ConnectomicsNetworkDefinitions::XML_VERTEX_LABEL, mitk::ConnectomicsNetworkDefinitions::XML_VERTEX_X, mitk::ConnectomicsNetworkDefinitions::XML_VERTEX_Y, mitk::ConnectomicsNetworkDefinitions::XML_VERTEX_Z, and mitk::ConnectomicsNetworkDefinitions::XML_VERTICES.
Referenced by mitk::ConnectomicsNetworkSerializer::Serialize().