TumorInvasionAnalysisTool.cpp File Reference

#include <mitkCollectionReader.h>
#include <mitkCollectionWriter.h>
#include <mitkDataCollection.h>
#include <mitkImageCast.h>
#include "mitkDataCollectionImageIterator.h"
#include <mitkCollectionStatistic.h>
#include <mitkTumorInvasionClassification.h>
#include "mitkCommandLineParser.h"
#include <itkImageRegionIterator.h>

Go to the source code of this file.

Functions
int	main (int argc, char *argv[])

Function Documentation

int main	(	int	argc,
		char *	argv[]
	)

Definition at line 33 of file TumorInvasionAnalysisTool.cpp.

References mitkCommandLineParser::addArgument(), mitk::CollectionReader::AddSubColIds(), us::any_cast(), mitkCommandLineParser::Bool, mitk::CollectionReader::ClearDataElementIds(), mitk::CollectionReader::ClearSubColIds(), mitk::CollectionStatistic::ComputeRMSD(), mitk::CollectionWriter::ExportCollectionToFolder(), features, mitkCommandLineParser::Float, mitk::CollectionStatistic::GetStatisticData(), mitk::DataCollectionImageIterator< TDataType, ImageDimension >::GetVoxel(), mitkCommandLineParser::helpText(), mitkCommandLineParser::InputFile, mitkCommandLineParser::Int, mitk::DataCollectionImageIterator< TDataType, ImageDimension >::IsAtEnd(), mitk::TumorInvasionClassification::LearnProgressionFeatures(), mitk::CollectionReader::LoadCollection(), mitk::StatisticData::m_DICE, mitk::StatisticData::m_RMSD, mitk::StatisticData::m_Sensitivity, MITK_ERROR, mitkCommandLineParser::OutputDirectory, mitkCommandLineParser::OutputFile, mitkCommandLineParser::parseArguments(), mitk::TumorInvasionClassification::PredictInvasion(), mitk::CollectionStatistic::Print(), mitk::TumorInvasionClassification::SamplesWeightingActivated(), mitk::TumorInvasionClassification::SanitizeResults(), mitk::TumorInvasionClassification::SaveRandomForest(), mitk::TumorInvasionClassification::SelectTrainingSamples(), mitkCommandLineParser::setArgumentPrefix(), mitkCommandLineParser::setCategory(), mitk::CollectionStatistic::SetClassCount(), mitk::TumorInvasionClassification::SetClassRatio(), mitk::CollectionStatistic::SetCollection(), mitkCommandLineParser::setContributor(), mitk::CollectionReader::SetDataItemNames(), mitkCommandLineParser::setDescription(), mitk::CollectionStatistic::SetGoldName(), mitk::CollectionStatistic::SetGroundTruthValueToIndexMapper(), mitk::CollectionStatistic::SetMaskName(), mitk::CollectionStatistic::SetTestName(), mitk::CollectionStatistic::SetTestValueToIndexMapper(), mitkCommandLineParser::setTitle(), mitk::TumorInvasionClassification::SetTrainMargin(), mitk::DataCollectionImageIterator< TDataType, ImageDimension >::SetVoxel(), mitkCommandLineParser::String, and mitk::CollectionStatistic::Update().