mitkPhotoacousticFilterService.h

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/*============================================================================

The Medical Imaging Interaction Toolkit (MITK)

Copyright (c) German Cancer Research Center (DKFZ)
All rights reserved.

Use of this source code is governed by a 3-clause BSD license that can be
found in the LICENSE file.

============================================================================*/

#ifndef mitkPhotoacousticFilterService_H_HEADER_INCLUDED
#define mitkPhotoacousticFilterService_H_HEADER_INCLUDED

#include "itkObject.h"
#include "mitkCommon.h"
#include "mitkImage.h"
#include <functional>

#include "mitkBeamformingSettings.h"
#include "mitkBeamformingFilter.h"
#include "MitkPhotoacousticsAlgorithmsExports.h"

namespace mitk {
  class MITKPHOTOACOUSTICSALGORITHMS_EXPORT PhotoacousticFilterService : public itk::Object
  {
  public:
    mitkClassMacroItkParent(mitk::PhotoacousticFilterService, itk::Object);
    itkFactorylessNewMacro(Self);

    enum BModeMethod { EnvelopeDetection, Abs };

    mitk::Image::Pointer ApplyBmodeFilter(mitk::Image::Pointer inputImage,
      BModeMethod method = BModeMethod::Abs,
      bool UseLogFilter = false);

    mitk::Image::Pointer ApplyResampling(mitk::Image::Pointer inputImage, double* outputSpacing);

    mitk::Image::Pointer ApplyResamplingToDim(mitk::Image::Pointer inputImage, double* outputDimension);

    mitk::Image::Pointer ApplyBeamforming(mitk::Image::Pointer inputImage, BeamformingSettings::Pointer config, std::function<void(int, std::string)> progressHandle = [](int, std::string) {});

    mitk::Image::Pointer ApplyCropping(mitk::Image::Pointer inputImage, int above, int below, int right, int left, int minSlice, int maxSlice, int* errCode);

    mitk::Image::Pointer ExtendImage(mitk::Image::Pointer inputImage, float pixelColor, unsigned int outputDimensionY);

    mitk::Image::Pointer ApplyBandpassFilter(mitk::Image::Pointer data,
      float BPHighPass, float BPLowPass,
      float alphaHighPass, float alphaLowPass,
      float timeSpacing, float SpeedOfSound, bool IsBFImage);

  protected:
    PhotoacousticFilterService();
    ~PhotoacousticFilterService() override;

    mitk::BeamformingFilter::Pointer m_BeamformingFilter;

    mitk::Image::Pointer ConvertToFloat(mitk::Image::Pointer);
  };
} // namespace mitk

#endif /* mitkPhotoacousticFilterService_H_HEADER_INCLUDED */