mitkPAComposedVolume.h

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/*============================================================================

The Medical Imaging Interaction Toolkit (MITK)

Copyright (c) German Cancer Research Center (DKFZ)
All rights reserved.

Use of this source code is governed by a 3-clause BSD license that can be
found in the LICENSE file.

============================================================================*/

#ifndef MITKPHOTOACOUSTICCOMPOSEDVOLUME_H
#define MITKPHOTOACOUSTICCOMPOSEDVOLUME_H

#include <MitkPhotoacousticsLibExports.h>

#include <mitkPAInSilicoTissueVolume.h>
#include <mitkPAFluenceYOffsetPair.h>
#include <vector>

//Includes for smart pointer usage
#include "mitkCommon.h"
#include "itkLightObject.h"

namespace mitk {
  namespace pa {
    class MITKPHOTOACOUSTICSLIB_EXPORT ComposedVolume : public itk::Object
    {
    public:
      mitkClassMacroItkParent(ComposedVolume, itk::Object);
      mitkNewMacro1Param(Self, InSilicoTissueVolume::Pointer);

      void AddSlice(mitk::pa::FluenceYOffsetPair::Pointer fluenceYOffsetPair);

      int GetNumberOfFluenceComponents();

      double GetFluenceValue(int fluenceComponent, int x, int y, int z);

      int GetYOffsetForFluenceComponentInPixels(int fluenceComponent);

      void Sort();

      itkGetMacro(GroundTruthVolume, InSilicoTissueVolume::Pointer);

    protected:
      ComposedVolume(InSilicoTissueVolume::Pointer groundTruthVolume);
      ~ComposedVolume() override;

    private:
      int m_FluenceComponents;
      InSilicoTissueVolume::Pointer m_GroundTruthVolume;
      std::vector<mitk::pa::FluenceYOffsetPair::Pointer> m_FluenceValues;
    };
  }
}

#endif // MITKPHOTOACOUSTICCOMPOSEDVOLUME_H