mitkImageDescriptor.cpp

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/*============================================================================

The Medical Imaging Interaction Toolkit (MITK)

Copyright (c) German Cancer Research Center (DKFZ)
All rights reserved.

Use of this source code is governed by a 3-clause BSD license that can be
found in the LICENSE file.

============================================================================*/
#include "mitkImageDescriptor.h"

mitk::ImageDescriptor::ImageDescriptor()
{
  // initialize the dimensions array
  for (auto &elem : m_Dimensions)
  {
    elem = 1;
  }

  this->m_NumberOfChannels = 0;
}

// FIXME manage memory flag
void mitk::ImageDescriptor::AddNewChannel(mitk::PixelType ptype, const char *name)
{
  size_t elems = 1;

  for (unsigned int i = 0; i < this->m_NumberOfDimensions; i++)
    elems *= this->m_Dimensions[i];

  mitk::ChannelDescriptor desc(ptype, elems);

  this->m_ChannelDesc.push_back(desc);

  if (name == nullptr)
    m_ChannelNames.push_back("Unnamed [" + ptype.GetPixelTypeAsString() + "]");
  else
    m_ChannelNames.push_back(name);

  this->m_NumberOfChannels++;

  return;
}

void mitk::ImageDescriptor::Initialize(const ImageDescriptor::Pointer refDescriptor, unsigned int channel)
{
  // initialize the members holding dimension information
  this->m_NumberOfChannels = refDescriptor->GetNumberOfChannels();
  this->m_NumberOfDimensions = refDescriptor->GetNumberOfDimensions();
  const unsigned int *refDims = refDescriptor->GetDimensions();

  // copy the dimension information
  for (unsigned int i = 0; i < this->m_NumberOfDimensions; i++)
  {
    this->m_Dimensions[i] = refDims[i];
  }

  // get the channel descriptor and store them and so the name of the channel
  mitk::ChannelDescriptor desc = refDescriptor->GetChannelDescriptor(channel);
  this->m_ChannelDesc.push_back(desc);
  this->m_ChannelNames.push_back(refDescriptor->GetChannelName(channel));
}

void mitk::ImageDescriptor::Initialize(const unsigned int *dims, const unsigned int dim)
{
  this->m_NumberOfDimensions = dim;

  // copy the dimension information
  for (unsigned int i = 0; i < this->m_NumberOfDimensions; i++)
  {
    this->m_Dimensions[i] = dims[i];
  }
}

mitk::ChannelDescriptor mitk::ImageDescriptor::GetChannelDescriptor(unsigned int id) const
{
  return this->m_ChannelDesc[id];
}

mitk::PixelType mitk::ImageDescriptor::GetChannelTypeByName(const char *name) const
{
  unsigned int idFound = 0;
  const std::string search_str(name);

  for (auto iter = this->m_ChannelNames.begin(); iter < this->m_ChannelNames.end(); iter++)
  {
    if (search_str.compare(*iter))
      idFound = iter - this->m_ChannelNames.begin();
  }

  return (m_ChannelDesc[idFound]).GetPixelType();
}

mitk::PixelType mitk::ImageDescriptor::GetChannelTypeById(const unsigned int id) const
{
  if (id > this->m_NumberOfChannels)
  {
    throw std::invalid_argument("The given id exceeds the number of active channel.");
  }
  else
  {
    mitk::ChannelDescriptor refDesc = this->m_ChannelDesc[id];
    return refDesc.GetPixelType(); //
  }
}

const std::string mitk::ImageDescriptor::GetChannelName(unsigned int id) const
{
  if (id > this->m_ChannelNames.size())
    return "Out-of-range-access";
  else
    return this->m_ChannelNames.at(id);
}