mitk::LabelSetImageToSurfaceFilter Class Reference

#include <mitkLabelSetImageToSurfaceFilter.h>

Inheritance diagram for mitk::LabelSetImageToSurfaceFilter:

Collaboration diagram for mitk::LabelSetImageToSurfaceFilter:

Public Types
typedef MultiLabelSegmentation::LabelValueType	LabelType
typedef std::map< LabelType, unsigned long >	LabelMapType
typedef std::map< unsigned int, LabelType >	IndexToLabelMapType
Public Types inherited from mitk::SurfaceSource
typedef SurfaceSource	Self
typedef BaseDataSource	Superclass
typedef itk::SmartPointer< Self >	Pointer
typedef itk::SmartPointer< const Self >	ConstPointer
typedef Surface	OutputType
Public Types inherited from mitk::BaseDataSource
typedef BaseDataSource	Self
typedef itk::ProcessObject	Superclass
typedef itk::SmartPointer< Self >	Pointer
typedef itk::SmartPointer< const Self >	ConstPointer
typedef BaseData	OutputType
typedef itk::DataObject::DataObjectIdentifierType	DataObjectIdentifierType

Public Member Functions
	mitkClassMacro (LabelSetImageToSurfaceFilter, SurfaceSource)
const mitk::Image *	GetInput (void)
virtual void	SetInput (const mitk::Image *image)
virtual void	SetGenerateAllLabels (bool _arg)
virtual bool	GetGenerateAllLabels ()
virtual void	GenerateAllLabelsOn ()
virtual void	GenerateAllLabelsOff ()
virtual void	SetRequestedLabel (int _arg)
virtual int	GetRequestedLabel ()
virtual void	SetBackgroundLabel (int _arg)
virtual int	GetBackgroundLabel ()
virtual void	SetUseSmoothing (int _arg)
virtual void	SetSigma (float _arg)
Public Member Functions inherited from mitk::SurfaceSource
virtual std::vector< std::string >	GetClassHierarchy () const override
virtual const char *	GetClassName () const
Pointer	Clone () const
OutputType *	GetOutput ()
const OutputType *	GetOutput () const
OutputType *	GetOutput (DataObjectPointerArraySizeType idx)
const OutputType *	GetOutput (DataObjectPointerArraySizeType idx) const
itk::DataObject::Pointer	MakeOutput (DataObjectPointerArraySizeType idx) override
itk::DataObject::Pointer	MakeOutput (const DataObjectIdentifierType &name) override
Public Member Functions inherited from mitk::BaseDataSource
OutputType *	GetOutput ()
const OutputType *	GetOutput () const
OutputType *	GetOutput (DataObjectPointerArraySizeType idx)
const OutputType *	GetOutput (DataObjectPointerArraySizeType idx) const
virtual void	GraftOutput (OutputType *output)
	Graft the specified BaseData onto this BaseDataSource's output. More...
virtual void	GraftOutput (const DataObjectIdentifierType &key, OutputType *output)
virtual void	GraftNthOutput (unsigned int idx, OutputType *output)
	Graft the specified base data object onto this BaseDataSource's idx'th output. More...
bool	Updating () const
	Access itk::ProcessObject::m_Updating. More...

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from mitk::SurfaceSource
static const char *	GetStaticNameOfClass ()
static Pointer	New ()
Static Public Member Functions inherited from mitk::BaseDataSource
static const char *	GetStaticNameOfClass ()

Protected Member Functions
	LabelSetImageToSurfaceFilter ()
	~LabelSetImageToSurfaceFilter () override
template<class T1 , class T2 , class T3 >
void	mitkVtkLinearTransformPoint (T1 matrix[4][4], T2 in[3], T3 out[3])
template<typename TPixel , unsigned int VImageDimension>
void	InternalProcessing (const itk::Image< TPixel, VImageDimension > *input, mitk::Surface *surface)
void	GenerateData () override
void	GenerateOutputInformation () override
Protected Member Functions inherited from mitk::SurfaceSource
	SurfaceSource ()
	~SurfaceSource () override
Protected Member Functions inherited from mitk::BaseDataSource
	BaseDataSource ()
	~BaseDataSource () override

Protected Attributes
mitk::Image::Pointer	m_ResultImage
bool	m_GenerateAllLabels
int	m_RequestedLabel
int	m_BackgroundLabel
int	m_UseSmoothing
float	m_Sigma
LabelMapType	m_AvailableLabels
IndexToLabelMapType	m_IndexToLabels
mitk::Vector3D	m_InputImageSpacing

Additional Inherited Members
Static Protected Member Functions inherited from mitk::BaseDataSource
static Pointer	New ()

Detailed Description

Generates surface meshes from a labelset image. If you want to calculate a surface representation for all available labels, you may call GenerateAllLabelsOn().

Definition at line 34 of file mitkLabelSetImageToSurfaceFilter.h.

Member Typedef Documentation

IndexToLabelMapType

typedef std::map<unsigned int, LabelType> mitk::LabelSetImageToSurfaceFilter::IndexToLabelMapType

Definition at line 45 of file mitkLabelSetImageToSurfaceFilter.h.

LabelMapType

typedef std::map<LabelType, unsigned long> mitk::LabelSetImageToSurfaceFilter::LabelMapType

Definition at line 43 of file mitkLabelSetImageToSurfaceFilter.h.

LabelType

typedef MultiLabelSegmentation::LabelValueType mitk::LabelSetImageToSurfaceFilter::LabelType

Definition at line 39 of file mitkLabelSetImageToSurfaceFilter.h.

Constructor & Destructor Documentation

LabelSetImageToSurfaceFilter()

mitk::LabelSetImageToSurfaceFilter::LabelSetImageToSurfaceFilter ( )

protected

~LabelSetImageToSurfaceFilter()

mitk::LabelSetImageToSurfaceFilter::~LabelSetImageToSurfaceFilter ( )

overrideprotected

Member Function Documentation

GenerateAllLabelsOff()

virtual void mitk::LabelSetImageToSurfaceFilter::GenerateAllLabelsOff ( )

virtual

GenerateAllLabelsOn()

virtual void mitk::LabelSetImageToSurfaceFilter::GenerateAllLabelsOn ( )

virtual

GenerateData()

void mitk::LabelSetImageToSurfaceFilter::GenerateData ( )

overrideprotected

GenerateOutputInformation()

void mitk::LabelSetImageToSurfaceFilter::GenerateOutputInformation ( )

overrideprotected

GetBackgroundLabel()

virtual int mitk::LabelSetImageToSurfaceFilter::GetBackgroundLabel ( )

virtual

Gets the label value of the background. No surface will be generated for this label.

Returns

the label of the background, by default 0

GetGenerateAllLabels()

virtual bool mitk::LabelSetImageToSurfaceFilter::GetGenerateAllLabels ( )

virtual

Returns

if all labels or only a specific label should be extracted.

GetInput()

const mitk::Image* mitk::LabelSetImageToSurfaceFilter::GetInput

(

void

)

Returns a const pointer to the labelset image set as input

GetRequestedLabel()

virtual int mitk::LabelSetImageToSurfaceFilter::GetRequestedLabel ( )

virtual

Returns the label you want to extract. This method only has an effect, if GenerateAllLabels() is set to false

Returns

the label to extract, by default 1

InternalProcessing()

template<typename TPixel , unsigned int VImageDimension>

void mitk::LabelSetImageToSurfaceFilter::InternalProcessing ( const itk::Image< TPixel, VImageDimension > *  input, mitk::Surface *  surface  )

protected

mitkClassMacro()

mitk::LabelSetImageToSurfaceFilter::mitkClassMacro	(	LabelSetImageToSurfaceFilter	,
		SurfaceSource
	)

mitkVtkLinearTransformPoint()

template<class T1 , class T2 , class T3 >

void mitk::LabelSetImageToSurfaceFilter::mitkVtkLinearTransformPoint ( T1  matrix[4][4], T2  in[3], T3  out[3]  )

inlineprotected

Transforms a point by a 4x4 matrix

Definition at line 117 of file mitkLabelSetImageToSurfaceFilter.h.

New()

static Pointer mitk::LabelSetImageToSurfaceFilter::New ( )

static

SetBackgroundLabel()

virtual void mitk::LabelSetImageToSurfaceFilter::SetBackgroundLabel ( int  _arg )

virtual

Sets the label value of the background. No surface will be generated for this label.

Parameters

_arg	the label of the background, by default 0

SetGenerateAllLabels()

virtual void mitk::LabelSetImageToSurfaceFilter::SetGenerateAllLabels ( bool  _arg )

virtual

Set whether you want to extract all labesl (true) or a single one.

SetInput()

virtual void mitk::LabelSetImageToSurfaceFilter::SetInput ( const mitk::Image *  image )

virtual

SetRequestedLabel()

virtual void mitk::LabelSetImageToSurfaceFilter::SetRequestedLabel ( int  _arg )

virtual

Set the label you want to extract. This method only has an effect, if GenerateAllLabels() is set to false

Parameters

_arg	the label to extract, by default 1

SetSigma()

virtual void mitk::LabelSetImageToSurfaceFilter::SetSigma ( float  _arg )

virtual

Sets the Sigma used in the gaussian smoothing

SetUseSmoothing()

virtual void mitk::LabelSetImageToSurfaceFilter::SetUseSmoothing ( int  _arg )

virtual

Sets whether to provide a smoothed surface

Member Data Documentation

m_AvailableLabels

LabelMapType mitk::LabelSetImageToSurfaceFilter::m_AvailableLabels

protected

Definition at line 142 of file mitkLabelSetImageToSurfaceFilter.h.

m_BackgroundLabel

int mitk::LabelSetImageToSurfaceFilter::m_BackgroundLabel

protected

Definition at line 136 of file mitkLabelSetImageToSurfaceFilter.h.

m_GenerateAllLabels

bool mitk::LabelSetImageToSurfaceFilter::m_GenerateAllLabels

protected

Definition at line 132 of file mitkLabelSetImageToSurfaceFilter.h.

m_IndexToLabels

IndexToLabelMapType mitk::LabelSetImageToSurfaceFilter::m_IndexToLabels

protected

Definition at line 144 of file mitkLabelSetImageToSurfaceFilter.h.

m_InputImageSpacing

mitk::Vector3D mitk::LabelSetImageToSurfaceFilter::m_InputImageSpacing

protected

Definition at line 146 of file mitkLabelSetImageToSurfaceFilter.h.

m_RequestedLabel

int mitk::LabelSetImageToSurfaceFilter::m_RequestedLabel

protected

Definition at line 134 of file mitkLabelSetImageToSurfaceFilter.h.

m_ResultImage

mitk::Image::Pointer mitk::LabelSetImageToSurfaceFilter::m_ResultImage

protected

Definition at line 127 of file mitkLabelSetImageToSurfaceFilter.h.

m_Sigma

float mitk::LabelSetImageToSurfaceFilter::m_Sigma

protected

Definition at line 140 of file mitkLabelSetImageToSurfaceFilter.h.

m_UseSmoothing

int mitk::LabelSetImageToSurfaceFilter::m_UseSmoothing

protected

Definition at line 138 of file mitkLabelSetImageToSurfaceFilter.h.

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The documentation for this class was generated from the following file:

• mitkLabelSetImageToSurfaceFilter.h