#include <QmitknnUNetToolGUI.h>

Inheritance diagram for QmitknnUNetToolGUI:

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Collaboration diagram for QmitknnUNetToolGUI:

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Signals
void	Operate (QString, QString, mitk::ProcessExecutor::Pointer, mitk::ProcessExecutor::ArgumentListType)
	signal for starting the segmentation which is caught by a worker thread. More...

Signals inherited from QmitkToolGUI
void	NewToolAssociated (mitk::Tool *)

Public Member Functions
	mitkClassMacro (QmitknnUNetToolGUI, QmitkMultiLabelSegWithPreviewToolGUIBase)

Pointer	Clone () const

Public Member Functions inherited from QmitkMultiLabelSegWithPreviewToolGUIBase
	mitkClassMacro (QmitkMultiLabelSegWithPreviewToolGUIBase, QmitkSegWithPreviewToolGUIBase)

Public Member Functions inherited from QmitkSegWithPreviewToolGUIBase
	mitkClassMacro (QmitkSegWithPreviewToolGUIBase, QmitkToolGUI)

Pointer	Clone () const

virtual bool	GetMode2D () const

Public Member Functions inherited from QmitkToolGUI
	mitkClassMacroItkParent (QmitkToolGUI, itk::Object)

void	SetTool (mitk::Tool *tool)

void	Register () const override

void	UnRegister () const ITK_NOEXCEPT ITK_OVERRIDE

void	SetReferenceCount (int) override

	~QmitkToolGUI () override

Static Public Member Functions
static Pointer	New ()

Public Attributes
QCache< size_t, nnUNetCache >	m_Cache

std::unordered_map< std::string, mitk::ProcessExecutor::Pointer >	m_Processes
	The hash map stores all bifurcating processes' ID. More...

Protected Slots
void	OnPreviewRequested ()
	Qt slot. More...

void	OnDirectoryChanged (const QString &)
	Qt slot. More...

void	OnModelChanged (const QString &)
	Qt slot. More...

void	OnTaskChanged (const QString &)
	Qt slot. More...

void	OnTrainerChanged (const QString &)
	Qt slot. More...

void	OnCheckBoxChanged (int)
	Qt slot. More...

void	SegmentationProcessFailed ()
	Qthread slot to capture failures from thread worker and shows error message. More...

void	SegmentationResultHandler (mitk::nnUNetTool *, bool forceRender=false)
	Qthread to capture successful nnUNet segmentation. Further, renders the LabelSet image. More...

void	OnModalitiesNumberChanged (int)
	Qt Slot. More...

void	OnPythonPathChanged (const QString &)
	Qt Slot. More...

void	OnRefreshPresssed ()
	Qt slot. More...

void	OnClearCachePressed ()
	Qt slot. More...

void	OnDownloadModel ()
	Qt slot. More...

void	OnDownloadWorkerExit (bool, const QString)
	Qt slot. More...

void	OnStopDownload ()
	Qt slot. More...

Protected Slots inherited from QmitkMultiLabelSegWithPreviewToolGUIBase
void	OnLabelSelectionChanged (const QmitkSimpleLabelSetListWidget::LabelVectorType &selectedLabels)

void	OnRadioTransferAllClicked (bool checked)

Protected Slots inherited from QmitkSegWithPreviewToolGUIBase
void	OnNewToolAssociated (mitk::Tool *)

void	OnAcceptPreview ()

Protected Member Functions
	QmitknnUNetToolGUI ()

	~QmitknnUNetToolGUI ()

void	ConnectNewTool (mitk::SegWithPreviewTool *newTool) override

void	InitializeUI (QBoxLayout *mainLayout) override

void	EnableWidgets (bool enabled) override

Protected Member Functions inherited from QmitkMultiLabelSegWithPreviewToolGUIBase
	QmitkMultiLabelSegWithPreviewToolGUIBase ()

	~QmitkMultiLabelSegWithPreviewToolGUIBase ()=default

void	SetLabelSetPreview (const mitk::MultiLabelSegmentation *preview)

void	ActualizePreviewLabelVisibility ()

void	DisplayTransferWidgets (bool enabled)
	To toggle visibility of "Transfer all labels" and "Transfer selected labels" radio buttons. More...

Protected Member Functions inherited from QmitkSegWithPreviewToolGUIBase
	QmitkSegWithPreviewToolGUIBase (bool mode2D, bool enableProcessingOfAllTimeSteps=true)

	~QmitkSegWithPreviewToolGUIBase () override

virtual void	DisconnectOldTool (mitk::SegWithPreviewTool *oldTool)

void	BusyStateChanged (bool isBusy) override

template<class TTool >
TTool *	GetConnectedToolAs ()

void	SetMergeStyle (mitk::MultiLabelSegmentation::MergeStyle mergeStyle)

void	SetOverwriteStyle (mitk::MultiLabelSegmentation::OverwriteStyle overwriteStyle)

QPushButton *	GetConfirmSegmentationButton () const

Protected Member Functions inherited from QmitkToolGUI
	QmitkToolGUI ()=default

Additional Inherited Members
Protected Types inherited from QmitkSegWithPreviewToolGUIBase
using	EnableConfirmSegBtnFunctionType = std::function< bool(bool)>

Protected Attributes inherited from QmitkSegWithPreviewToolGUIBase
EnableConfirmSegBtnFunctionType	m_EnableConfirmSegBtnFnc

Protected Attributes inherited from QmitkToolGUI
mitk::Tool::Pointer	m_Tool

Detailed Description

Definition at line 48 of file QmitknnUNetToolGUI.h.

Constructor & Destructor Documentation

◆ QmitknnUNetToolGUI()

QmitknnUNetToolGUI::QmitknnUNetToolGUI ( )

protected

◆ ~QmitknnUNetToolGUI()

QmitknnUNetToolGUI::~QmitknnUNetToolGUI ( )

protected

Member Function Documentation

◆ Clone()

Pointer QmitknnUNetToolGUI::Clone ( ) const

◆ ConnectNewTool()

void QmitknnUNetToolGUI::ConnectNewTool ( mitk::SegWithPreviewTool * newTool )

overrideprotectedvirtual

Reimplemented from QmitkSegWithPreviewToolGUIBase.

◆ EnableWidgets()

void QmitknnUNetToolGUI::EnableWidgets ( bool enabled )

overrideprotectedvirtual

This method is used to control/set the enabled state of the tool UI widgets. It is e.g. used if the busy state is changed (see BusyStateChanged). Override the default implementation, e.g. if a tool adds his own UI elements (normally by overriding InitializeUI()) and wants to control how the widgets are enabled/disabled.

Reimplemented from QmitkMultiLabelSegWithPreviewToolGUIBase.

◆ InitializeUI()

void QmitknnUNetToolGUI::InitializeUI ( QBoxLayout * mainLayout )

overrideprotectedvirtual

This method is called by OnNewToolAssociated if the UI is initialized the first time to allow derived classes to introduce own UI code. Overwrite to change. The implementation should ensure that alle widgets needed for the tool UI are properly allocated. If one needs to eecute time (e.g. to connect events between the tool and the UI) each time the tool changes, override the functions ConnectNewTool() and DisconnectOldTool().

Reimplemented from QmitkMultiLabelSegWithPreviewToolGUIBase.

◆ mitkClassMacro()

QmitknnUNetToolGUI::mitkClassMacro	(	QmitknnUNetToolGUI	,
		QmitkMultiLabelSegWithPreviewToolGUIBase
	)

◆ New()

static Pointer QmitknnUNetToolGUI::New ( )

static

◆ OnCheckBoxChanged

void QmitknnUNetToolGUI::OnCheckBoxChanged ( int )

protectedslot

Qt slot.

◆ OnClearCachePressed

void QmitknnUNetToolGUI::OnClearCachePressed ( )

protectedslot

Qt slot.

◆ OnDirectoryChanged

void QmitknnUNetToolGUI::OnDirectoryChanged ( const QString & )

protectedslot

Qt slot.

◆ OnDownloadModel

void QmitknnUNetToolGUI::OnDownloadModel ( )

protectedslot

Qt slot.

◆ OnDownloadWorkerExit

void QmitknnUNetToolGUI::OnDownloadWorkerExit	(	bool	,
		const	QString
	)

protectedslot

Qt slot.

◆ OnModalitiesNumberChanged

void QmitknnUNetToolGUI::OnModalitiesNumberChanged ( int )

protectedslot

Qt Slot.

◆ OnModelChanged

void QmitknnUNetToolGUI::OnModelChanged ( const QString & )

protectedslot

Qt slot.

◆ OnPreviewRequested

void QmitknnUNetToolGUI::OnPreviewRequested ( )

protectedslot

Qt slot.

◆ OnPythonPathChanged

void QmitknnUNetToolGUI::OnPythonPathChanged ( const QString & )

protectedslot

Qt Slot.

◆ OnRefreshPresssed

void QmitknnUNetToolGUI::OnRefreshPresssed ( )

protectedslot

Qt slot.

◆ OnStopDownload

void QmitknnUNetToolGUI::OnStopDownload ( )

protectedslot

Qt slot.

◆ OnTaskChanged

void QmitknnUNetToolGUI::OnTaskChanged ( const QString & )

protectedslot

Qt slot.

◆ OnTrainerChanged

void QmitknnUNetToolGUI::OnTrainerChanged ( const QString & )

protectedslot

Qt slot.

◆ Operate

void QmitknnUNetToolGUI::Operate	(	QString	,
		QString	,
		mitk::ProcessExecutor::Pointer	,
		mitk::ProcessExecutor::ArgumentListType
	)

signal

signal for starting the segmentation which is caught by a worker thread.

◆ SegmentationProcessFailed

void QmitknnUNetToolGUI::SegmentationProcessFailed ( )

protectedslot

Qthread slot to capture failures from thread worker and shows error message.

◆ SegmentationResultHandler

void QmitknnUNetToolGUI::SegmentationResultHandler	(	mitk::nnUNetTool *	,
		bool	forceRender = `false`
	)

protectedslot

Qthread to capture successful nnUNet segmentation. Further, renders the LabelSet image.

Member Data Documentation

◆ m_Cache

QCache<size_t, nnUNetCache> QmitknnUNetToolGUI::m_Cache

Definition at line 55 of file QmitknnUNetToolGUI.h.

◆ m_Processes

std::unordered_map<std::string, mitk::ProcessExecutor::Pointer> QmitknnUNetToolGUI::m_Processes

The hash map stores all bifurcating processes' ID.

Definition at line 63 of file QmitknnUNetToolGUI.h.

The documentation for this class was generated from the following file:

QmitknnUNetToolGUI.h

Signals

Public Member Functions

Static Public Member Functions

Public Attributes

Protected Slots

Protected Member Functions

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ QmitknnUNetToolGUI()

◆ ~QmitknnUNetToolGUI()

Member Function Documentation

◆ Clone()

◆ ConnectNewTool()

◆ EnableWidgets()

◆ InitializeUI()

◆ mitkClassMacro()

◆ New()

◆ OnCheckBoxChanged

◆ OnClearCachePressed

◆ OnDirectoryChanged

◆ OnDownloadModel

◆ OnDownloadWorkerExit

◆ OnModalitiesNumberChanged

◆ OnModelChanged

◆ OnPreviewRequested

◆ OnPythonPathChanged

◆ OnRefreshPresssed

◆ OnStopDownload

◆ OnTaskChanged

◆ OnTrainerChanged

◆ Operate

◆ SegmentationProcessFailed

◆ SegmentationResultHandler

Member Data Documentation

◆ m_Cache

◆ m_Processes