Medical Imaging Interaction Toolkit  2024.06.00
Medical Imaging Interaction Toolkit
Public Types | Public Member Functions | Protected Member Functions | List of all members
mitk::ModelFactoryBase Class Referenceabstract

#include <mitkModelFactoryBase.h>

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Public Types

typedef ModelBase ModelBaseType
 
typedef ModelBaseType::Pointer ModelBasePointer
 
typedef ModelTraitsInterface::ParameterNameType ParameterNameType
 
typedef ModelTraitsInterface::ParameterNamesType ParameterNamesType
 
typedef ModelTraitsInterface::ParametersSizeType ParametersSizeType
 
typedef ModelTraitsInterface::ParamterScaleMapType ParamterScaleMapType
 
typedef ModelTraitsInterface::ParamterUnitMapType ParamterUnitMapType
 
typedef ModelTraitsInterface::FunctionStringType FunctionStringType
 
typedef ModelTraitsInterface::ModellClassIDType ModellClassIDType
 
typedef ModelTraitsInterface::DerivedParameterNamesType DerivedParameterNamesType
 
typedef ModelTraitsInterface::DerivedParametersSizeType DerivedParametersSizeType
 
typedef ModelTraitsInterface::DerivedParamterScaleMapType DerivedParamterScaleMapType
 
typedef ModelTraitsInterface::DerivedParamterUnitMapType DerivedParamterUnitMapType
 
- Public Types inherited from mitk::ModelTraitsInterface
typedef itk::Array< double > ModelResultType
 
using ParameterValueType = double
 
typedef itk::Array< ParameterValueType > ParametersType
 
typedef std::string ParameterNameType
 
typedef std::vector< ParameterNameType > ParameterNamesType
 
typedef ParametersType::SizeValueType ParametersSizeType
 
typedef ParameterNamesType DerivedParameterNamesType
 
typedef ParametersSizeType DerivedParametersSizeType
 
typedef std::map< ParameterNameType, double > ParamterScaleMapType
 
typedef std::map< ParameterNameType, std::string > ParamterUnitMapType
 
typedef std::map< ParameterNameType, double > DerivedParamterScaleMapType
 
typedef std::map< ParameterNameType, std::string > DerivedParamterUnitMapType
 
typedef std::string FunctionStringType
 
typedef std::string ModellClassIDType
 

Public Member Functions

 mitkClassMacroItkParent (ModelFactoryBase, itk::Object)
 
virtual ModelBasePointer CreateModel () const =0
 
ModelParameterizerBase::Pointer CreateParameterizer (const modelFit::ModelFitInfo *fit) const
 
virtual ConstraintCheckerBase::Pointer CreateDefaultConstraints () const =0
 
virtual ParametersType GetDefaultInitialParameterization () const =0
 
- Public Member Functions inherited from mitk::ModelTraitsInterface
virtual ParameterNamesType GetParameterNames () const =0
 
virtual ParametersSizeType GetNumberOfParameters () const =0
 
virtual ParamterScaleMapType GetParameterScales () const =0
 
virtual ParamterUnitMapType GetParameterUnits () const =0
 
virtual DerivedParameterNamesType GetDerivedParameterNames () const =0
 
virtual DerivedParametersSizeType GetNumberOfDerivedParameters () const =0
 
virtual DerivedParamterScaleMapType GetDerivedParameterScales () const =0
 
virtual DerivedParamterUnitMapType GetDerivedParameterUnits () const =0
 
virtual std::string GetModelDisplayName () const =0
 
virtual std::string GetModelType () const =0
 
virtual FunctionStringType GetFunctionString () const =0
 
virtual ModellClassIDType GetClassID () const =0
 
virtual std::string GetXName () const =0
 
virtual std::string GetXAxisName () const =0
 
virtual std::string GetXAxisUnit () const =0
 
virtual std::string GetYAxisName () const =0
 
virtual std::string GetYAxisUnit () const =0
 

Protected Member Functions

virtual ModelParameterizerBase::Pointer DoCreateParameterizer (const modelFit::ModelFitInfo *fit) const =0
 
 ModelFactoryBase ()
 
 ~ModelFactoryBase () override
 
- Protected Member Functions inherited from mitk::ModelTraitsInterface
 ModelTraitsInterface ()
 
virtual ~ModelTraitsInterface ()
 

Detailed Description

Base class for model factories. Default implementation just passes the model properties through from an instance created with add model. To use the the base class, derive and at least implement the abstract member functions.

Definition at line 32 of file mitkModelFactoryBase.h.

Member Typedef Documentation

◆ DerivedParameterNamesType

typedef ModelTraitsInterface::DerivedParameterNamesType mitk::ModelFactoryBase::DerivedParameterNamesType

Definition at line 54 of file mitkModelFactoryBase.h.

◆ DerivedParametersSizeType

typedef ModelTraitsInterface::DerivedParametersSizeType mitk::ModelFactoryBase::DerivedParametersSizeType

Definition at line 55 of file mitkModelFactoryBase.h.

◆ DerivedParamterScaleMapType

typedef ModelTraitsInterface::DerivedParamterScaleMapType mitk::ModelFactoryBase::DerivedParamterScaleMapType

Definition at line 56 of file mitkModelFactoryBase.h.

◆ DerivedParamterUnitMapType

typedef ModelTraitsInterface::DerivedParamterUnitMapType mitk::ModelFactoryBase::DerivedParamterUnitMapType

Definition at line 57 of file mitkModelFactoryBase.h.

◆ FunctionStringType

typedef ModelTraitsInterface::FunctionStringType mitk::ModelFactoryBase::FunctionStringType

Definition at line 51 of file mitkModelFactoryBase.h.

◆ ModelBasePointer

typedef ModelBaseType::Pointer mitk::ModelFactoryBase::ModelBasePointer

Definition at line 43 of file mitkModelFactoryBase.h.

◆ ModelBaseType

typedef ModelBase mitk::ModelFactoryBase::ModelBaseType

Definition at line 42 of file mitkModelFactoryBase.h.

◆ ModellClassIDType

typedef ModelTraitsInterface::ModellClassIDType mitk::ModelFactoryBase::ModellClassIDType

Definition at line 52 of file mitkModelFactoryBase.h.

◆ ParameterNamesType

typedef ModelTraitsInterface::ParameterNamesType mitk::ModelFactoryBase::ParameterNamesType

Definition at line 46 of file mitkModelFactoryBase.h.

◆ ParameterNameType

typedef ModelTraitsInterface::ParameterNameType mitk::ModelFactoryBase::ParameterNameType

Definition at line 45 of file mitkModelFactoryBase.h.

◆ ParametersSizeType

typedef ModelTraitsInterface::ParametersSizeType mitk::ModelFactoryBase::ParametersSizeType

Definition at line 47 of file mitkModelFactoryBase.h.

◆ ParamterScaleMapType

typedef ModelTraitsInterface::ParamterScaleMapType mitk::ModelFactoryBase::ParamterScaleMapType

Definition at line 49 of file mitkModelFactoryBase.h.

◆ ParamterUnitMapType

typedef ModelTraitsInterface::ParamterUnitMapType mitk::ModelFactoryBase::ParamterUnitMapType

Definition at line 50 of file mitkModelFactoryBase.h.

Constructor & Destructor Documentation

◆ ModelFactoryBase()

mitk::ModelFactoryBase::ModelFactoryBase ( )
protected

◆ ~ModelFactoryBase()

mitk::ModelFactoryBase::~ModelFactoryBase ( )
overrideprotected

Member Function Documentation

◆ CreateDefaultConstraints()

virtual ConstraintCheckerBase::Pointer mitk::ModelFactoryBase::CreateDefaultConstraints ( ) const
pure virtual

Create the default constraints that should/can be used for fitting if nothing else is specified by the user.

Returns
Pointer to the constraint checker for default constraints. May return a NULL pointer to indicated that the Model has no constraints by default.

Implemented in mitk::ConcreteModelFactoryBase< TModel >, mitk::ExtendedOneTissueCompartmentModelFactory, mitk::TwoCompartmentExchangeModelFactoryBase< TModelParameterizer >, mitk::ExponentialDecayModelFactory, mitk::ExponentialSaturationModelFactory, mitk::ExtendedToftsModelFactory, mitk::OneTissueCompartmentModelFactory, mitk::TwoTissueCompartmentFDGModelFactory, mitk::TwoTissueCompartmentModelFactoryBase< TModelParameterizer >, and mitk::StandardToftsModelFactory.

◆ CreateModel()

virtual ModelBasePointer mitk::ModelFactoryBase::CreateModel ( ) const
pure virtual

Implemented in mitk::ConcreteModelFactoryBase< TModel >.

◆ CreateParameterizer()

ModelParameterizerBase::Pointer mitk::ModelFactoryBase::CreateParameterizer ( const modelFit::ModelFitInfo *  fit) const

Created a model parameterizer set up according to the passed model fit info.

Precondition
fit must point to a valid instance.

◆ DoCreateParameterizer()

virtual ModelParameterizerBase::Pointer mitk::ModelFactoryBase::DoCreateParameterizer ( const modelFit::ModelFitInfo *  fit) const
protectedpure virtual

Implemented in mitk::GenericParamModelFactory, mitk::ThreeStepLinearModelFactory, mitk::ExpDecayOffsetModelFactory, mitk::ExponentialDecayModelFactory, mitk::ExponentialSaturationModelFactory, mitk::LinearModelFactory, mitk::DescriptivePharmacokineticBrixModelFactory, mitk::TestModelFactory, mitk::ConcreteAIFBasedModelFactory< TModelParameterizer >, mitk::ConcreteAIFBasedModelFactory< ExtendedToftsModelParameterizer >, mitk::ConcreteAIFBasedModelFactory< TwoTissueCompartmentFDGModelParameterizer >, mitk::ConcreteAIFBasedModelFactory< ExtendedOneTissueCompartmentModelParameterizer >, mitk::ConcreteAIFBasedModelFactory< StandardToftsModelParameterizer >, mitk::ConcreteAIFBasedModelFactory< TwoCompartmentExchangeModelParameterizer >, mitk::ConcreteAIFBasedModelFactory< OneTissueCompartmentModelParameterizer >, mitk::ConcreteAIFBasedModelFactory< TwoTissueCompartmentModelParameterizer >, and mitk::TwoStepLinearModelFactory.

◆ GetDefaultInitialParameterization()

virtual ParametersType mitk::ModelFactoryBase::GetDefaultInitialParameterization ( ) const
pure virtual

This function returns the default parameterization (e.g. initial parametrization for fitting) defined by the model developer for for the given model.

Implemented in mitk::TwoTissueCompartmentModelFactoryBase< TModelParameterizer >, mitk::TwoCompartmentExchangeModelFactoryBase< TModelParameterizer >, mitk::ExtendedOneTissueCompartmentModelFactory, mitk::GenericParamModelFactory, mitk::ThreeStepLinearModelFactory, mitk::ExtendedToftsModelFactory, mitk::OneTissueCompartmentModelFactory, mitk::TwoTissueCompartmentFDGModelFactory, mitk::LinearModelFactory, mitk::DescriptivePharmacokineticBrixModelFactory, mitk::StandardToftsModelFactory, mitk::ExpDecayOffsetModelFactory, mitk::ExponentialDecayModelFactory, mitk::ExponentialSaturationModelFactory, mitk::TestModelFactory, and mitk::TwoStepLinearModelFactory.

◆ mitkClassMacroItkParent()

mitk::ModelFactoryBase::mitkClassMacroItkParent ( ModelFactoryBase  ,
itk::Object   
)
The documentation for this class was generated from the following file: