Medical Imaging Interaction Toolkit  2023.04.00
Medical Imaging Interaction Toolkit
mitkTwoTissueCompartmentModel.h
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1 /*============================================================================
2 
3 The Medical Imaging Interaction Toolkit (MITK)
4 
5 Copyright (c) German Cancer Research Center (DKFZ)
6 All rights reserved.
7 
8 Use of this source code is governed by a 3-clause BSD license that can be
9 found in the LICENSE file.
10 
11 ============================================================================*/
12 
13 #ifndef mitkTwoTissueCompartmentModel_h
14 #define mitkTwoTissueCompartmentModel_h
15 
16 #include "mitkAIFBasedModelBase.h"
18 
19 
20 namespace mitk
21 {
23  {
24 
25  public:
30 
32  itkFactorylessNewMacro(Self);
33  itkCloneMacro(Self);
34 
37 
39  static const std::string MODEL_DISPLAY_NAME;
40 
41  static const std::string NAME_PARAMETER_K1;
42  static const std::string NAME_PARAMETER_k2;
43  static const std::string NAME_PARAMETER_k3;
44  static const std::string NAME_PARAMETER_k4;
45  static const std::string NAME_PARAMETER_VB;
46 
47  static const std::string UNIT_PARAMETER_K1;
48  static const std::string UNIT_PARAMETER_k2;
49  static const std::string UNIT_PARAMETER_k3;
50  static const std::string UNIT_PARAMETER_k4;
51  static const std::string UNIT_PARAMETER_VB;
52 
53  static const unsigned int POSITION_PARAMETER_K1;
54  static const unsigned int POSITION_PARAMETER_k2;
55  static const unsigned int POSITION_PARAMETER_k3;
56  static const unsigned int POSITION_PARAMETER_k4;
57  static const unsigned int POSITION_PARAMETER_VB;
58 
59  static const unsigned int NUMBER_OF_PARAMETERS;
60 
61  std::string GetModelDisplayName() const override;
62 
63  std::string GetModelType() const override;
64 
65  ParameterNamesType GetParameterNames() const override;
66  ParametersSizeType GetNumberOfParameters() const override;
67 
68  ParamterUnitMapType GetParameterUnits() const override;
69 
70  protected:
72  ~TwoTissueCompartmentModel() override;
73 
78  itk::LightObject::Pointer InternalClone() const override;
79 
80  ModelResultType ComputeModelfunction(const ParametersType& parameters) const override;
81 
82  void PrintSelf(std::ostream& os, ::itk::Indent indent) const override;
83 
84  private:
85 
86 
87  //No copy constructor allowed
88  TwoTissueCompartmentModel(const Self& source);
89  void operator=(const Self&); //purposely not implemented
90 
91  };
92 }
93 
94 #endif
mitk::ModelTraitsInterface::ParamterUnitMapType
std::map< ParameterNameType, std::string > ParamterUnitMapType
Definition: mitkModelTraitsInterface.h:40
mitk::TwoTissueCompartmentModel::ConstPointer
itk::SmartPointer< const Self > ConstPointer
Definition: mitkTwoTissueCompartmentModel.h:29
MITKPHARMACOKINETICS_EXPORT
#define MITKPHARMACOKINETICS_EXPORT
Definition: MitkPharmacokineticsExports.h:15
mitk::ModelBase::ParameterNamesType
ModelTraitsInterface::ParameterNamesType ParameterNamesType
Definition: mitkModelBase.h:64
mitk::ModelBase::ModelResultType
ModelTraitsInterface::ModelResultType ModelResultType
Definition: mitkModelBase.h:55
mitk::TwoTissueCompartmentModel::NAME_PARAMETER_k4
static const std::string NAME_PARAMETER_k4
Definition: mitkTwoTissueCompartmentModel.h:44
mitkAIFBasedModelBase.h
mitk::TwoTissueCompartmentModel::UNIT_PARAMETER_k2
static const std::string UNIT_PARAMETER_k2
Definition: mitkTwoTissueCompartmentModel.h:48
mitk::TwoTissueCompartmentModel::POSITION_PARAMETER_K1
static const unsigned int POSITION_PARAMETER_K1
Definition: mitkTwoTissueCompartmentModel.h:53
mitk::TwoTissueCompartmentModel::NAME_PARAMETER_k3
static const std::string NAME_PARAMETER_k3
Definition: mitkTwoTissueCompartmentModel.h:43
mitk::TwoTissueCompartmentModel::NAME_PARAMETER_K1
static const std::string NAME_PARAMETER_K1
Definition: mitkTwoTissueCompartmentModel.h:41
mitk::ModelBase::ParametersType
ModelTraitsInterface::ParametersType ParametersType
Definition: mitkModelBase.h:59
mitk::TwoTissueCompartmentModel::UNIT_PARAMETER_K1
static const std::string UNIT_PARAMETER_K1
Definition: mitkTwoTissueCompartmentModel.h:47
itk::SmartPointer< Self >
MitkPharmacokineticsExports.h
mitk::TwoTissueCompartmentModel::NAME_PARAMETER_VB
static const std::string NAME_PARAMETER_VB
Definition: mitkTwoTissueCompartmentModel.h:45
mitk::TwoTissueCompartmentModel::Self
TwoTissueCompartmentModel Self
Definition: mitkTwoTissueCompartmentModel.h:26
mitk
DataCollection - Class to facilitate loading/accessing structured data.
Definition: RenderingTests.dox:1
mitk::TwoTissueCompartmentModel::Pointer
itk::SmartPointer< Self > Pointer
Definition: mitkTwoTissueCompartmentModel.h:28
mitk::TwoTissueCompartmentModel
Definition: mitkTwoTissueCompartmentModel.h:22
mitk::TwoTissueCompartmentModel::UNIT_PARAMETER_k4
static const std::string UNIT_PARAMETER_k4
Definition: mitkTwoTissueCompartmentModel.h:50
mitk::TwoTissueCompartmentModel::NUMBER_OF_PARAMETERS
static const unsigned int NUMBER_OF_PARAMETERS
Definition: mitkTwoTissueCompartmentModel.h:59
mitk::TwoTissueCompartmentModel::POSITION_PARAMETER_VB
static const unsigned int POSITION_PARAMETER_VB
Definition: mitkTwoTissueCompartmentModel.h:57
mitk::TwoTissueCompartmentModel::MODEL_DISPLAY_NAME
static const std::string MODEL_DISPLAY_NAME
Definition: mitkTwoTissueCompartmentModel.h:36
mitk::TwoTissueCompartmentModel::UNIT_PARAMETER_VB
static const std::string UNIT_PARAMETER_VB
Definition: mitkTwoTissueCompartmentModel.h:51
mitk::ModelBase::ParametersSizeType
ModelTraitsInterface::ParametersSizeType ParametersSizeType
Definition: mitkModelBase.h:65
mitk::TwoTissueCompartmentModel::POSITION_PARAMETER_k3
static const unsigned int POSITION_PARAMETER_k3
Definition: mitkTwoTissueCompartmentModel.h:55
mitk::TwoTissueCompartmentModel::POSITION_PARAMETER_k2
static const unsigned int POSITION_PARAMETER_k2
Definition: mitkTwoTissueCompartmentModel.h:54
mitk::TwoTissueCompartmentModel::NAME_PARAMETER_k2
static const std::string NAME_PARAMETER_k2
Definition: mitkTwoTissueCompartmentModel.h:42
mitk::TwoTissueCompartmentModel::POSITION_PARAMETER_k4
static const unsigned int POSITION_PARAMETER_k4
Definition: mitkTwoTissueCompartmentModel.h:56
mitk::ModelBase
Base class for (dynamic) models. A model can be used to calculate its signal given the discrete time ...
Definition: mitkModelBase.h:47
mitk::AIFBasedModelBase
Base Class for all physiological perfusion models using an Aterial Input Function All AIF based model...
Definition: mitkAIFBasedModelBase.h:31
mitk::TwoTissueCompartmentModel::UNIT_PARAMETER_k3
static const std::string UNIT_PARAMETER_k3
Definition: mitkTwoTissueCompartmentModel.h:49
mitk::TwoTissueCompartmentModel::Superclass
AIFBasedModelBase Superclass
Definition: mitkTwoTissueCompartmentModel.h:27