A utility class to load and save data from/to the local file system. More...

#include <mitkIOUtil.h>

Inheritance diagram for mitk::IOUtil:

Classes
struct	LoadInfo

struct	ReaderOptionsFunctorBase

struct	SaveInfo

struct	WriterOptionsFunctorBase

Static Public Member Functions
static std::string	GetProgramPath ()

static std::string	GetTempPath ()

static char	GetDirectorySeparator ()

static std::string	CreateTemporaryFile (std::ofstream &tmpStream, const std::string &templateName="XXXXXX", std::string path=std::string())

static std::string	CreateTemporaryFile (std::ofstream &tmpStream, std::ios_base::openmode mode, const std::string &templateName="XXXXXX", std::string path=std::string())

static std::string	CreateTemporaryFile (const std::string &templateName="XXXXXX", std::string path=std::string())

static std::string	CreateTemporaryDirectory (const std::string &templateName="XXXXXX", std::string path=std::string())

static DataStorage::SetOfObjects::Pointer	Load (const std::string &path, DataStorage &storage, const ReaderOptionsFunctorBase *optionsCallback=nullptr)
	Load a file into the given DataStorage. More...

static DataStorage::SetOfObjects::Pointer	Load (const std::string &path, const IFileReader::Options &options, DataStorage &storage)
	Load a file into the given DataStorage given user defined IFileReader::Options. More...

static std::vector< BaseData::Pointer >	Load (const std::string &path, const ReaderOptionsFunctorBase *optionsCallback=nullptr)
	Load a file and return the loaded data. More...

template<typename T >
static T::Pointer	Load (const std::string &path, const ReaderOptionsFunctorBase *optionsCallback=nullptr)

static std::vector< BaseData::Pointer >	Load (const std::string &path, const IFileReader::Options &options)
	Load a file and return the loaded data. More...

template<typename T >
static T::Pointer	Load (const std::string &path, const IFileReader::Options &options)

static DataStorage::SetOfObjects::Pointer	Load (const std::vector< std::string > &paths, DataStorage &storage, const ReaderOptionsFunctorBase *optionsCallback=nullptr)
	Loads a list of file paths into the given DataStorage. More...

static std::vector< BaseData::Pointer >	Load (const std::vector< std::string > &paths, const ReaderOptionsFunctorBase *optionsCallback=nullptr)

static std::vector< BaseData::Pointer >	Load (const us::ModuleResource &usResource, std::ios_base::openmode mode=std::ios_base::in)
	Loads the contents of a us::ModuleResource and returns the corresponding mitk::BaseData. More...

template<typename T >
static T::Pointer	Load (const us::ModuleResource &usResource, std::ios_base::openmode mode=std::ios_base::in)

static BaseData::Pointer	Load (const std::string &path, const PropertyList *properties)

static void	Save (const mitk::BaseData *data, const std::string &path, bool setPathProperty=false)
	Save a mitk::BaseData instance. More...

static void	Save (const mitk::BaseData *data, const std::string &path, const IFileWriter::Options &options, bool setPathProperty=false)
	Save a mitk::BaseData instance. More...

static void	Save (const mitk::BaseData *data, const std::string &mimeType, const std::string &path, bool addExtension=true, bool setPathProperty=false)
	Save a mitk::BaseData instance. More...

static void	Save (const mitk::BaseData *data, const std::string &mimeType, const std::string &path, const mitk::IFileWriter::Options &options, bool addExtension=true, bool setPathProperty=false)
	Save a mitk::BaseData instance. More...

static void	Save (std::vector< SaveInfo > &saveInfos, bool setPathProperty=false)
	Use SaveInfo objects to save BaseData instances. More...

Static Protected Member Functions
static std::string	Load (std::vector< LoadInfo > &loadInfos, DataStorage::SetOfObjects nodeResult, DataStorage ds, const ReaderOptionsFunctorBase *optionsCallback)

static std::string	Save (const BaseData data, const std::string &mimeType, const std::string &path, WriterOptionsFunctorBase optionsCallback, bool addExtension, bool setPathProperty)

static std::string	Save (std::vector< SaveInfo > &saveInfos, WriterOptionsFunctorBase *optionsCallback, bool setPathProperty)

Detailed Description

A utility class to load and save data from/to the local file system.

See also: QmitkIOUtil

Definition at line 49 of file mitkIOUtil.h.

Member Function Documentation

◆ CreateTemporaryDirectory()

static std::string mitk::IOUtil::CreateTemporaryDirectory	(	const std::string &	templateName = `"XXXXXX"`,
		std::string	path = `std::string()`
	)

static

Create a temporary directory.

This method generates a uniquely named temporary directory from templateName. The last set of six consecutive 'X' characters in templateName is replaced with a string that makes the directory name unique.

The directory is created with read, write and executable permissions for owner only.

Parameters

templateName	An optional template for the directory name.
path	An optional path where the temporary directory should be created. Defaults to the default temp path as returned by GetTempPath().

Returns: The filename of the created temporary file.

Exceptions

mitk::Exception if the temporary directory could not be created.

◆ CreateTemporaryFile() [1/3]

static std::string mitk::IOUtil::CreateTemporaryFile	(	const std::string &	templateName = `"XXXXXX"`,
		std::string	path = `std::string()`
	)

static

Creates an empty temporary file.

This method generates a unique temporary filename from templateName and creates this file.

The file is created with read and write permissions for owner only.

This version is potentially unsafe because the created temporary file is not kept open and could be used by another process between calling this method and opening the returned

file path for reading or writing.

Returns: The filename of the created temporary file.

Parameters

templateName	An optional template for the filename.
path	An optional path where the temporary file should be created. Defaults to the default temp path as returned by GetTempPath().

Exceptions

mitk::Exception if the temporary file could not be created.

◆ CreateTemporaryFile() [2/3]

static std::string mitk::IOUtil::CreateTemporaryFile	(	std::ofstream &	tmpStream,
		const std::string &	templateName = `"XXXXXX"`,
		std::string	path = `std::string()`
	)

static

Create and open a temporary file.

This method generates a unique temporary filename from templateName, creates and opens the file using the output stream tmpStream and returns the name of the newly create file.

The templateName argument must contain six consecutive 'X' characters ("XXXXXX") and these are replaced with a string that makes the filename unique.

The file is created with read and write permissions for owner only.

Parameters

tmpStream	The output stream for writing to the temporary file.
templateName	An optional template for the filename.
path	An optional path where the temporary file should be created. Defaults to the default temp path as returned by GetTempPath().

Returns: The filename of the created temporary file.

Exceptions

mitk::Exception if the temporary file could not be created.

◆ CreateTemporaryFile() [3/3]

static std::string mitk::IOUtil::CreateTemporaryFile	(	std::ofstream &	tmpStream,
		std::ios_base::openmode	mode,
		const std::string &	templateName = `"XXXXXX"`,
		std::string	path = `std::string()`
	)

static

Create and open a temporary file.

This method generates a unique temporary filename from templateName, creates and opens the file using the output stream tmpStream and the specified open mode mode and returns the name of the newly create file. The open mode is always OR'd with std::ios_base::out | std::ios_base::trunc.

The templateName argument must contain six consecutive 'X' characters ("XXXXXX") and these are replaced with a string that makes the filename unique.

The file is created with read and write permissions for owner only.

Parameters

tmpStream	The output stream for writing to the temporary file.
mode	The open mode for the temporary file stream.
templateName	An optional template for the filename.
path	An optional path where the temporary file should be created. Defaults to the default temp path as returned by GetTempPath().

Returns: The filename of the created temporary file.

Exceptions

mitk::Exception if the temporary file could not be created.

◆ GetDirectorySeparator()

static char mitk::IOUtil::GetDirectorySeparator ( )

static

Returns the Directory Seperator for the current OS.

Returns: the Directory Seperator for the current OS, i.e. "\\" for Windows and "/" otherwise.

◆ GetProgramPath()

static std::string mitk::IOUtil::GetProgramPath ( )

static

Get the file system path where the running executable is located.

Returns: The location of the currently running executable, without the filename.

Referenced by mitk::RenderingTestHelper::ArgcHelperClass::ArgcHelperClass().

◆ GetTempPath()

static std::string mitk::IOUtil::GetTempPath ( )

static

Get the default temporary path.

Returns: The default path for temporary data.

◆ Load() [1/12]

static std::vector<BaseData::Pointer> mitk::IOUtil::Load	(	const std::string &	path,
		const IFileReader::Options &	options
	)

static

Load a file and return the loaded data.

This method calls Load(const std::vector<std::string>&) with a one-element vector.

Parameters

path	The absolute file name including the file extension.
options	IFileReader option instance that should be used if selected reader has options.

Returns: The set of added DataNode objects.

Exceptions

mitk::Exception if path could not be loaded.

See also: Load(const std::vector<std::string>&, DataStorage&)

◆ Load() [2/12]

template<typename T >

static T::Pointer mitk::IOUtil::Load	(	const std::string &	path,
		const IFileReader::Options &	options
	)

inlinestatic

Definition at line 299 of file mitkIOUtil.h.

◆ Load() [3/12]

static DataStorage::SetOfObjects::Pointer mitk::IOUtil::Load	(	const std::string &	path,
		const IFileReader::Options &	options,
		DataStorage &	storage
	)

static

Load a file into the given DataStorage given user defined IFileReader::Options.

This method calls Load(const std::vector<std::string>&, DataStorage&) with a one-element vector.

Parameters

path	The absolute file name including the file extension.
options	IFileReader option instance that should be used if selected reader has options.
storage	A DataStorage object to which the loaded data will be added.

Returns: The set of added DataNode objects.

Exceptions

mitk::Exception if path could not be loaded.

See also: Load(const std::vector<std::string>&, DataStorage&)

◆ Load() [4/12]

static BaseData::Pointer mitk::IOUtil::Load	(	const std::string &	path,
		const PropertyList *	properties
	)

static

◆ Load() [5/12]

static std::vector<BaseData::Pointer> mitk::IOUtil::Load	(	const std::string &	path,
		const ReaderOptionsFunctorBase *	optionsCallback = `nullptr`
	)

static

Load a file and return the loaded data.

This method calls Load(const std::vector<std::string>&) with a one-element vector.

Parameters

path	The absolute file name including the file extension.
optionsCallback	Pointer to a callback instance. The callback is used by the load operation if more the suitable reader was found or the reader has options that can be set.

Returns: The set of added DataNode objects.

Exceptions

mitk::Exception if path could not be loaded.

See also: Load(const std::vector<std::string>&, DataStorage&)

◆ Load() [6/12]

template<typename T >

static T::Pointer mitk::IOUtil::Load	(	const std::string &	path,
		const ReaderOptionsFunctorBase *	optionsCallback = `nullptr`
	)

inlinestatic

Definition at line 277 of file mitkIOUtil.h.

◆ Load() [7/12]

static DataStorage::SetOfObjects::Pointer mitk::IOUtil::Load	(	const std::string &	path,
		DataStorage &	storage,
		const ReaderOptionsFunctorBase *	optionsCallback = `nullptr`
	)

static

Load a file into the given DataStorage.

This method calls Load(const std::vector<std::string>&, DataStorage&) with a one-element vector.

Parameters

path	The absolute file name including the file extension.
storage	A DataStorage object to which the loaded data will be added.
optionsCallback	Pointer to a callback instance. The callback is used by the load operation if more the suitable reader was found or the reader has options that can be set.

Returns: The set of added DataNode objects.

Exceptions

mitk::Exception if path could not be loaded.

See also: Load(const std::vector<std::string>&, DataStorage&)

◆ Load() [8/12]

static std::vector<BaseData::Pointer> mitk::IOUtil::Load	(	const std::vector< std::string > &	paths,
		const ReaderOptionsFunctorBase *	optionsCallback = `nullptr`
	)

static

◆ Load() [9/12]

static DataStorage::SetOfObjects::Pointer mitk::IOUtil::Load	(	const std::vector< std::string > &	paths,
		DataStorage &	storage,
		const ReaderOptionsFunctorBase *	optionsCallback = `nullptr`
	)

static

Loads a list of file paths into the given DataStorage.

If an entry in paths cannot be loaded, this method will continue to load the remaining entries into storage and throw an exception afterwards.

Parameters

paths	A list of absolute file names including the file extension.
storage	A DataStorage object to which the loaded data will be added.
optionsCallback	Pointer to a callback instance. The callback is used by the load operation if more the suitable reader was found or the reader has options that can be set.

Returns: The set of added DataNode objects.

Exceptions

mitk::Exception if an entry in paths could not be loaded.

◆ Load() [10/12]

static std::vector<BaseData::Pointer> mitk::IOUtil::Load	(	const us::ModuleResource &	usResource,
		std::ios_base::openmode	mode = `std::ios_base::in`
	)

static

Loads the contents of a us::ModuleResource and returns the corresponding mitk::BaseData.

Parameters

usResource	a ModuleResource, representing a BaseData object
mode	Optional parameter to set the openmode of the stream

Returns: The set of loaded BaseData objects. Should contain either one or zero elements, since a resource stream respresents one object.

Exceptions

mitk::Exception if no reader was found for the stream.

◆ Load() [11/12]

template<typename T >

static T::Pointer mitk::IOUtil::Load	(	const us::ModuleResource &	usResource,
		std::ios_base::openmode	mode = `std::ios_base::in`
	)

inlinestatic

Definition at line 337 of file mitkIOUtil.h.

◆ Load() [12/12]

static std::string mitk::IOUtil::Load	(	std::vector< LoadInfo > &	loadInfos,
		DataStorage::SetOfObjects *	nodeResult,
		DataStorage *	ds,
		const ReaderOptionsFunctorBase *	optionsCallback
	)

staticprotected

◆ Save() [1/7]

static std::string mitk::IOUtil::Save	(	const BaseData *	data,
		const std::string &	mimeType,
		const std::string &	path,
		WriterOptionsFunctorBase *	optionsCallback,
		bool	addExtension,
		bool	setPathProperty
	)

staticprotected

◆ Save() [2/7]

static void mitk::IOUtil::Save	(	const mitk::BaseData *	data,
		const std::string &	mimeType,
		const std::string &	path,
		bool	addExtension = `true`,
		bool	setPathProperty = `false`
	)

static

Save a mitk::BaseData instance.

Parameters

data	The data to save.
mimeType	The mime-type to use for writing `data`.
path	The path to the image including file name and an optional file extension.
addExtension	If `true`, an extension according to the given `mimeType` is added to `path` if it does not contain one. If `path` already contains a file name extension, it is not checked for compatibility with `mimeType`.
setPathProperty

Exceptions

mitk::Exception if no writer for the combination of data and mimeType is available or the writer is not able to write the image.

◆ Save() [3/7]

static void mitk::IOUtil::Save	(	const mitk::BaseData *	data,
		const std::string &	mimeType,
		const std::string &	path,
		const mitk::IFileWriter::Options &	options,
		bool	addExtension = `true`,
		bool	setPathProperty = `false`
	)

static

Save a mitk::BaseData instance.

Parameters

data	The data to save.
mimeType	The mime-type to use for writing `data`.
path	The path to the image including file name and an optional file extension.
options	Configuration data for the used IFileWriter instance.
addExtension	If `true`, an extension according to the given `mimeType` is added to `path` if it does not contain one. If `path` already contains a file name extension, it is not checked for compatibility with `mimeType`.
setPathProperty

Exceptions

mitk::Exception if no writer for the combination of data and mimeType is available or the writer is not able to write the image.

◆ Save() [4/7]

static void mitk::IOUtil::Save	(	const mitk::BaseData *	data,
		const std::string &	path,
		bool	setPathProperty = `false`
	)

static

Save a mitk::BaseData instance.

Parameters

data	The data to save.
path	The path to the image including file name and and optional file extension. If no extension is set, the default extension and mime-type for the BaseData type of `data` is used.
setPathProperty

Exceptions

mitk::Exception if no writer for data is available or the writer is not able to write the image.

◆ Save() [5/7]

static void mitk::IOUtil::Save	(	const mitk::BaseData *	data,
		const std::string &	path,
		const IFileWriter::Options &	options,
		bool	setPathProperty = `false`
	)

static

Save a mitk::BaseData instance.

Parameters

data	The data to save.
path	The path to the image including file name and an optional file extension. If no extension is set, the default extension and mime-type for the BaseData type of `data` is used.
options	The IFileWriter options to use for the selected writer.
setPathProperty

Exceptions

mitk::Exception if no writer for data is available or the writer is not able to write the image.

◆ Save() [6/7]

static void mitk::IOUtil::Save	(	std::vector< SaveInfo > &	saveInfos,
		bool	setPathProperty = `false`
	)

static

Use SaveInfo objects to save BaseData instances.

This is a low-level method for directly working with SaveInfo objects. Usually, the Save() methods taking a BaseData object as an argument are more appropriate.

Parameters

saveInfos	A list of SaveInfo objects for saving contained BaseData objects.
setPathProperty

See also: Save(const mitk::BaseData*, const std::string&)

◆ Save() [7/7]

static std::string mitk::IOUtil::Save	(	std::vector< SaveInfo > &	saveInfos,
		WriterOptionsFunctorBase *	optionsCallback,
		bool	setPathProperty
	)

staticprotected

The documentation for this class was generated from the following file:

mitkIOUtil.h

Classes

Static Public Member Functions

Static Protected Member Functions

Detailed Description

Member Function Documentation

◆ CreateTemporaryDirectory()

◆ CreateTemporaryFile() [1/3]

file path for reading or writing.

◆ CreateTemporaryFile() [2/3]

◆ CreateTemporaryFile() [3/3]

◆ GetDirectorySeparator()

◆ GetProgramPath()

◆ GetTempPath()

◆ Load() [1/12]

◆ Load() [2/12]

◆ Load() [3/12]

◆ Load() [4/12]

◆ Load() [5/12]

◆ Load() [6/12]

◆ Load() [7/12]

◆ Load() [8/12]

◆ Load() [9/12]

◆ Load() [10/12]

◆ Load() [11/12]

◆ Load() [12/12]

◆ Save() [1/7]

◆ Save() [2/7]

◆ Save() [3/7]

◆ Save() [4/7]

◆ Save() [5/7]

◆ Save() [6/7]

◆ Save() [7/7]