Medical Imaging Interaction Toolkit
2016.11.0
Medical Imaging Interaction Toolkit
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This view provides the user interface for the global Gibbs tractography algorithm, a global fiber tracking algorithm, originally proposed by Reisert et.al. [1].
Mandatory Input:
Optional Input:
The automatic selection of parameters for the particle length/width and weight are determined directly from the input image using information about the image spacing and GFA.
Once started, the tracking can be monitored via the textual output that informs about the tracking progress and several stats of the current state of the algorithm. If enabled, the intermediate tracking results are displayed in the renderwindows each second. This live visualization should usually be disabled for performance reasons. It can be turned on and off during the tracking process via the according checkbox. The button next to this checkbox allows the visualization of only the next iteration step.
[1] Reisert, M., Mader, I., Anastasopoulos, C., Weigel, M., Schnell, S., Kiselev, V.: Global fiber reconstruction becomes practical. Neuroimage 54 (2011) 955-962