Medical Imaging Interaction Toolkit  2016.11.0
Medical Imaging Interaction Toolkit
Fiber Quantification

This view provides tools to derive additional information from exsisting fiber bundles and to quantify them:

  • Tract density image: generate a 2D heatmap from a fiber bundle
  • Binary envelope: generate a binary image from a fiber bundle
  • Fiber bundle image: generate a 2D rgba image representation of the fiber bundle
  • Fiber endings image: generate a 2D image showing the locations of fiber endpoints
  • Fiber endings pointset: generate a poinset containing the locations of fiber endpoints
  • Calculate the voxel-wise main fiber directions from a tractogram.
Input fiber bundle
Output main fiber directions