AcceptChange(double costBefore, double costAfter, double temperature) const | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | protected |
CleanUp() override | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | virtual |
Clone() const | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | |
ConnectomicsSimulatedAnnealingPermutationBase() | mitk::ConnectomicsSimulatedAnnealingPermutationBase | protected |
ConnectomicsSimulatedAnnealingPermutationModularity() | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | protected |
Evaluate(ToModuleMapType *mapping) const | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | protected |
extractModuleSubgraph(ToModuleMapType *vertexToModuleMap, mitk::ConnectomicsNetwork::Pointer network, int moduleToSplit, mitk::ConnectomicsNetwork::Pointer subNetwork, VertexToVertexMapType *graphToSubgraphVertexMap, VertexToVertexMapType *subgraphToGraphVertexMap) | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | protected |
GetMapping() | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | |
getNumberOfModules(ToModuleMapType *vertexToModuleMap) const | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | |
getNumberOfVerticesInModule(ToModuleMapType *vertexToModuleMap, int module) const | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | |
HasCostFunction() | mitk::ConnectomicsSimulatedAnnealingPermutationBase | |
Initialize() override | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | virtual |
joinTwoModules(ToModuleMapType *vertexToModuleMap, int moduleA, int moduleB) | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | protected |
m_BestSolution | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | protected |
m_CostFunction | mitk::ConnectomicsSimulatedAnnealingPermutationBase | protected |
m_Depth | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | protected |
m_Network | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | protected |
m_StepSize | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | protected |
mitkClassMacroItkParent(ConnectomicsSimulatedAnnealingPermutationModularity, itk::Object) | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | |
mitk::ConnectomicsSimulatedAnnealingPermutationBase::mitkClassMacroItkParent(ConnectomicsSimulatedAnnealingPermutationBase, itk::Object) | mitk::ConnectomicsSimulatedAnnealingPermutationBase | |
New() | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | static |
Permutate(double temperature) override | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | virtual |
permutateMappingModuleChange(ToModuleMapType *vertexToModuleMap, double currentTemperature, mitk::ConnectomicsNetwork::Pointer network) | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | protected |
permutateMappingSingleNodeShift(ToModuleMapType *vertexToModuleMap, mitk::ConnectomicsNetwork::Pointer network) | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | protected |
randomlyAssignNodesToModules(ToModuleMapType *vertexToModuleMap, int numberOfIntendedModules) | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | protected |
removeModule(ToModuleMapType *vertexToModuleMap, int module) | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | protected |
SetCostFunction(mitk::ConnectomicsSimulatedAnnealingCostFunctionBase::Pointer costFunction) | mitk::ConnectomicsSimulatedAnnealingPermutationBase | |
SetDepth(int depth) | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | |
SetMapping(ToModuleMapType mapping) | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | |
SetNetwork(mitk::ConnectomicsNetwork::Pointer theNetwork) | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | |
SetStepSize(double size) | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | |
splitModule(ToModuleMapType *vertexToModuleMap, double currentTemperature, mitk::ConnectomicsNetwork::Pointer network, int moduleToSplit) | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | protected |
ToModuleMapType typedef | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | |
VertexDescriptorType typedef | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | |
VertexToVertexMapType typedef | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | |
~ConnectomicsSimulatedAnnealingPermutationBase() | mitk::ConnectomicsSimulatedAnnealingPermutationBase | protected |
~ConnectomicsSimulatedAnnealingPermutationModularity() | mitk::ConnectomicsSimulatedAnnealingPermutationModularity | protected |