Medical Imaging Interaction Toolkit  2018.4.99-f51274ea
Medical Imaging Interaction Toolkit
mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer Class Reference

#include <mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h>

Inheritance diagram for mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer:
Collaboration diagram for mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer:

Public Types

typedef DescriptivePharmacokineticBrixModelValueBasedParameterizer Self
 
typedef ConcreteModelParameterizerBase< mitk::DescriptivePharmacokineticBrixModelSuperclass
 
typedef itk::SmartPointer< SelfPointer
 
typedef itk::SmartPointer< const SelfConstPointer
 
typedef Superclass::ModelBaseType ModelBaseType
 
typedef Superclass::ModelBasePointer ModelBasePointer
 
typedef Superclass::ModelType ModelType
 
typedef Superclass::ModelPointer ModelPointer
 
typedef Superclass::StaticParameterValueType StaticParameterValueType
 
typedef Superclass::StaticParameterValuesType StaticParameterValuesType
 
typedef Superclass::StaticParameterMapType StaticParameterMapType
 
typedef itk::Image< double, 3 > BaseImageType
 
typedef Superclass::IndexType IndexType
 
- Public Types inherited from mitk::ConcreteModelParameterizerBase< mitk::DescriptivePharmacokineticBrixModel >
typedef ConcreteModelParameterizerBase< mitk::DescriptivePharmacokineticBrixModelSelf
 
typedef ModelParameterizerBase Superclass
 
typedef itk::SmartPointer< SelfPointer
 
typedef itk::SmartPointer< const SelfConstPointer
 
typedef Superclass::ModelBaseType ModelBaseType
 
typedef Superclass::ModelBasePointer ModelBasePointer
 
typedef mitk::DescriptivePharmacokineticBrixModel ModelType
 
typedef ModelType::Pointer ModelPointer
 
typedef Superclass::StaticParameterValueType StaticParameterValueType
 
typedef Superclass::StaticParameterValuesType StaticParameterValuesType
 
typedef Superclass::StaticParameterMapType StaticParameterMapType
 
typedef Superclass::IndexType IndexType
 
- Public Types inherited from mitk::ModelParameterizerBase
typedef ModelParameterizerBase Self
 
typedef itk::Object Superclass
 
typedef itk::SmartPointer< SelfPointer
 
typedef itk::SmartPointer< const SelfConstPointer
 
typedef ModelBase ModelBaseType
 
typedef ModelBaseType::Pointer ModelBasePointer
 
typedef ModelBaseType::ParametersType ParametersType
 
typedef ModelBaseType::StaticParameterValueType StaticParameterValueType
 
typedef ModelBaseType::StaticParameterValuesType StaticParameterValuesType
 
typedef ModelBaseType::StaticParameterMapType StaticParameterMapType
 
typedef ModelBaseType::TimeGridType TimeGridType
 
typedef ::itk::Index< 3 > IndexType
 
- Public Types inherited from mitk::ModelTraitsInterface
typedef itk::Array< double > ModelResultType
 
using ParameterValueType = double
 
typedef itk::Array< ParameterValueTypeParametersType
 
typedef std::string ParameterNameType
 
typedef std::vector< ParameterNameTypeParameterNamesType
 
typedef ParametersType::SizeValueType ParametersSizeType
 
typedef ParameterNamesType DerivedParameterNamesType
 
typedef ParametersSizeType DerivedParametersSizeType
 
typedef std::map< ParameterNameType, double > ParamterScaleMapType
 
typedef std::map< ParameterNameType, std::string > ParamterUnitMapType
 
typedef std::map< ParameterNameType, double > DerivedParamterScaleMapType
 
typedef std::map< ParameterNameType, std::string > DerivedParamterUnitMapType
 
typedef std::string FunctionStringType
 
typedef std::string ModellClassIDType
 

Public Member Functions

virtual const char * GetClassName () const
 
virtual void SetTau (double _arg)
 
virtual const double & GetTau ()
 
virtual void SetBaseValue (double _arg)
 
virtual const double & GetBaseValue ()
 
StaticParameterMapType GetGlobalStaticParameters () const override
 
StaticParameterMapType GetLocalStaticParameters (const IndexType &currentPosition) const override
 
ParametersType GetDefaultInitialParameterization () const override
 
- Public Member Functions inherited from mitk::ConcreteModelParameterizerBase< mitk::DescriptivePharmacokineticBrixModel >
StaticParameterMapType GetGlobalStaticParameters () const override
 
StaticParameterMapType GetLocalStaticParameters (const IndexType &) const override
 
ModelBasePointer GenerateParameterizedModel (const IndexType &currentPosition) const override
 
ModelBasePointer GenerateParameterizedModel () const override
 
ParametersType GetDefaultInitialParameterization () const override
 
ParameterNamesType GetParameterNames () const override
 
ParametersSizeType GetNumberOfParameters () const override
 
ParamterScaleMapType GetParameterScales () const override
 
ParamterUnitMapType GetParameterUnits () const override
 
ParameterNamesType GetDerivedParameterNames () const override
 
ParametersSizeType GetNumberOfDerivedParameters () const override
 
DerivedParamterScaleMapType GetDerivedParameterScales () const override
 
DerivedParamterUnitMapType GetDerivedParameterUnits () const override
 
std::string GetModelDisplayName () const override
 
std::string GetModelType () const override
 
FunctionStringType GetFunctionString () const override
 
ModellClassIDType GetClassID () const override
 
std::string GetXName () const override
 
std::string GetXAxisName () const override
 
std::string GetXAxisUnit () const override
 
std::string GetYAxisName () const override
 
std::string GetYAxisUnit () const override
 
- Public Member Functions inherited from mitk::ModelParameterizerBase
ParametersType GetInitialParameterization () const
 
ParametersType GetInitialParameterization (const IndexType &currentPosition) const
 
void SetInitialParameterizationDelegate (const InitialParameterizationDelegateBase *delegate)
 
virtual void SetDefaultTimeGrid (TimeGridType _arg)
 
virtual const TimeGridTypeGetDefaultTimeGrid ()
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from mitk::ConcreteModelParameterizerBase< mitk::DescriptivePharmacokineticBrixModel >
static Pointer New ()
 

Protected Member Functions

 DescriptivePharmacokineticBrixModelValueBasedParameterizer ()
 
 ~DescriptivePharmacokineticBrixModelValueBasedParameterizer () override
 
- Protected Member Functions inherited from mitk::ConcreteModelParameterizerBase< mitk::DescriptivePharmacokineticBrixModel >
 ConcreteModelParameterizerBase ()
 
 ~ConcreteModelParameterizerBase () override
 
- Protected Member Functions inherited from mitk::ModelParameterizerBase
 ModelParameterizerBase ()
 
 ~ModelParameterizerBase () override
 
- Protected Member Functions inherited from mitk::ModelTraitsInterface
 ModelTraitsInterface ()
 
virtual ~ModelTraitsInterface ()
 

Protected Attributes

double m_Tau
 
double m_BaseValue
 
- Protected Attributes inherited from mitk::ModelParameterizerBase
InitialParameterizationDelegateBase::ConstPointer m_InitialDelegate
 
TimeGridType m_DefaultTimeGrid
 

Detailed Description

Parameterizer for the DescriptivePharmacokineticBrixModel that don't use an image for initializing the model but a single signal value. This parameterizer is amongst others used for ROI based fiting strategies where no complete image is needed/used.

See also
DescriptivePharmacokineticBrixModelParameterizer

Definition at line 24 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

Member Typedef Documentation

◆ BaseImageType

◆ ConstPointer

◆ IndexType

◆ ModelBasePointer

◆ ModelBaseType

◆ ModelPointer

◆ ModelType

◆ Pointer

◆ Self

◆ StaticParameterMapType

◆ StaticParameterValuesType

◆ StaticParameterValueType

◆ Superclass

Constructor & Destructor Documentation

◆ DescriptivePharmacokineticBrixModelValueBasedParameterizer()

mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::DescriptivePharmacokineticBrixModelValueBasedParameterizer ( )
protected

◆ ~DescriptivePharmacokineticBrixModelValueBasedParameterizer()

mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::~DescriptivePharmacokineticBrixModelValueBasedParameterizer ( )
overrideprotected

Member Function Documentation

◆ GetBaseValue()

virtual const double& mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::GetBaseValue ( )
virtual

◆ GetClassName()

virtual const char* mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::GetClassName ( ) const
virtual

◆ GetDefaultInitialParameterization()

mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::ParametersType mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::GetDefaultInitialParameterization ( ) const
overridevirtual

◆ GetGlobalStaticParameters()

mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::StaticParameterMapType mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::GetGlobalStaticParameters ( ) const
overridevirtual

◆ GetLocalStaticParameters()

mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::StaticParameterMapType mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::GetLocalStaticParameters ( const IndexType currentPosition) const
overridevirtual

◆ GetTau()

virtual const double& mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::GetTau ( )
virtual

◆ New()

static Pointer mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::New ( )
static

◆ SetBaseValue()

virtual void mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::SetBaseValue ( double  _arg)
virtual

◆ SetTau()

virtual void mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::SetTau ( double  _arg)
virtual

Member Data Documentation

◆ m_BaseValue

double mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::m_BaseValue
protected

Contains the base value that should be used by the model.

Definition at line 80 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

Referenced by GetLocalStaticParameters().

◆ m_Tau

double mitk::DescriptivePharmacokineticBrixModelValueBasedParameterizer::m_Tau
protected

injection time Tau in minutes [min]

Definition at line 77 of file mitkDescriptivePharmacokineticBrixModelValueBasedParameterizer.h.

Referenced by GetGlobalStaticParameters().


The documentation for this class was generated from the following files: